RNA–Protein interactions for RNA: ENST00000467825.2

RPL13A-202, Transcript of ribosomal protein L13a, humanhuman

TSL 5

Gene RPL13A, Length 660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-202ENST00000467825 NISCHQ9Y2I1 1504 aa37.42■■■■□ 3.58
RPL13A-202ENST00000467825 CCDC180Q9P1Z9 1646 aa33.35■■■□□ 2.93
RPL13A-202ENST00000467825 ABCC9O60706 1549 aa33.02■■■□□ 2.88
RPL13A-202ENST00000467825 RB1CC1Q8TDY2 1594 aa31.55■■■□□ 2.64
RPL13A-202ENST00000467825 NACADO15069 1562 aa31.46■■■□□ 2.63
RPL13A-202ENST00000467825 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
RPL13A-202ENST00000467825 MYO15BQ96JP2 1530 aa31.21■■■□□ 2.59
RPL13A-202ENST00000467825 ZCCHC6Q5VYS8 1495 aaKnown RBP31.11■■■□□ 2.57
RPL13A-202ENST00000467825 DCAF1Q9Y4B6 1507 aa30.94■■■□□ 2.54
RPL13A-202ENST00000467825 UNC13AQ9UPW8 1703 aa30.87■■■□□ 2.53
RPL13A-202ENST00000467825 PABPN1Q86U42 306 aaKnown RBP eCLIP30.83■■■□□ 2.534e-6■□□□□ 9.3
RPL13A-202ENST00000467825 DNAJC5BQ9UF47 199 aa30.78■■■□□ 2.52
RPL13A-202ENST00000467825 BICRAQ9NZM4 1560 aa30.74■■■□□ 2.51
RPL13A-202ENST00000467825 SCRIBQ14160 1630 aa30.41■■■□□ 2.46
RPL13A-202ENST00000467825 SHROOM4Q9ULL8 1493 aa30.28■■■□□ 2.44
RPL13A-202ENST00000467825 EIF4G1Q04637 1599 aaKnown RBP29.9■■■□□ 2.38
RPL13A-202ENST00000467825 CC2D2AQ9P2K1 1620 aa29.85■■■□□ 2.37
RPL13A-202ENST00000467825 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
RPL13A-202ENST00000467825 NCAPD3P42695 1498 aa29.1■■■□□ 2.25
RPL13A-202ENST00000467825 SMARCA4P51532 1647 aa29.08■■■□□ 2.25
RPL13A-202ENST00000467825 ATAD2BQ9ULI0 1458 aa29.06■■■□□ 2.24
RPL13A-202ENST00000467825 BAZ1AQ9NRL2 1556 aaPredicted RBP28.97■■■□□ 2.23
RPL13A-202ENST00000467825 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
RPL13A-202ENST00000467825 HMGXB3Q12766 1538 aa28.87■■■□□ 2.21
RPL13A-202ENST00000467825 MROH2BQ7Z745 1585 aa28.86■■■□□ 2.21
RPL13A-202ENST00000467825 PEG3Q9GZU2 1588 aa28.84■■■□□ 2.21
RPL13A-202ENST00000467825 BAZ1BQ9UIG0 1483 aaKnown RBP28.72■■■□□ 2.19
RPL13A-202ENST00000467825 NESP48681 1621 aa28.51■■■□□ 2.15
RPL13A-202ENST00000467825 WIZO95785 1651 aa28.48■■■□□ 2.15
RPL13A-202ENST00000467825 RSF1Q96T23 1441 aaPredicted RBP28.41■■■□□ 2.14
RPL13A-202ENST00000467825 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
RPL13A-202ENST00000467825 LAMC3Q9Y6N6 1575 aa28.32■■■□□ 2.12
RPL13A-202ENST00000467825 CUX2O14529 1486 aa28.29■■■□□ 2.12
RPL13A-202ENST00000467825 CADPSQ9ULU8 1353 aa28.21■■■□□ 2.11
RPL13A-202ENST00000467825 TOP2AP11388 1531 aaKnown RBP28.15■■■□□ 2.1
RPL13A-202ENST00000467825 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
RPL13A-202ENST00000467825 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
RPL13A-202ENST00000467825 KIF21AQ7Z4S6 1674 aa28.09■■■□□ 2.09
RPL13A-202ENST00000467825 CFTRP13569 1480 aa27.99■■■□□ 2.07
RPL13A-202ENST00000467825 DNAJC5Q9H3Z4 198 aa27.91■■■□□ 2.06
RPL13A-202ENST00000467825 MRC2Q9UBG0 1479 aa27.89■■■□□ 2.05
RPL13A-202ENST00000467825 CCDC88BA6NC98 1476 aa27.86■■■□□ 2.05
RPL13A-202ENST00000467825 FANCD2Q9BXW9 1451 aa27.86■■■□□ 2.05
RPL13A-202ENST00000467825 WDR62O43379 1518 aa27.83■■■□□ 2.05
RPL13A-202ENST00000467825 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.04
RPL13A-202ENST00000467825 URB2Q14146 1524 aaKnown RBP27.66■■■□□ 2.02
RPL13A-202ENST00000467825 PRDM2Q13029 1718 aa27.61■■■□□ 2.01
RPL13A-202ENST00000467825 TOPBP1Q92547 1522 aa27.4■■□□□ 1.98
RPL13A-202ENST00000467825 SUPT5HO00267 1087 aaKnown RBP27.32■■□□□ 1.96
RPL13A-202ENST00000467825 ABCC8Q09428 1581 aa27.3■■□□□ 1.96
RPL13A-202ENST00000467825 DNMBPQ6XZF7 1577 aa27.3■■□□□ 1.96
RPL13A-202ENST00000467825 IFT140Q96RY7 1462 aa27.28■■□□□ 1.96
RPL13A-202ENST00000467825 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.95
RPL13A-202ENST00000467825 POLA1P09884 1462 aaPredicted RBP27.15■■□□□ 1.94
RPL13A-202ENST00000467825 TARBP1Q13395 1621 aaKnown RBP27.14■■□□□ 1.94
RPL13A-202ENST00000467825 CUX1P39880 1505 aa27.08■■□□□ 1.93
RPL13A-202ENST00000467825 EIF4G3O43432 1585 aaKnown RBP27.06■■□□□ 1.92
RPL13A-202ENST00000467825 OSCARQ8IYS5 282 aa27.05■■□□□ 1.92
RPL13A-202ENST00000467825 RAD54L2Q9Y4B4 1467 aa27.05■■□□□ 1.92
RPL13A-202ENST00000467825 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.925e-18■■■■■ 39.2
RPL13A-202ENST00000467825 FGD5Q6ZNL6 1462 aa27.01■■□□□ 1.91
RPL13A-202ENST00000467825 SOGA1O94964 1423 aa27■■□□□ 1.91
RPL13A-202ENST00000467825 TDRD9Q8NDG6 1382 aaKnown RBP26.92■■□□□ 1.9
RPL13A-202ENST00000467825 WDR97A6NE52 1622 aa26.83■■□□□ 1.88
RPL13A-202ENST00000467825 CHD1O14646 1710 aa26.76■■□□□ 1.87
RPL13A-202ENST00000467825 ABCA10Q8WWZ4 1543 aa26.75■■□□□ 1.87
RPL13A-202ENST00000467825 SNAPC4Q5SXM2 1469 aa26.74■■□□□ 1.87
RPL13A-202ENST00000467825 TRIM41Q8WV44 630 aa26.73■■□□□ 1.87
RPL13A-202ENST00000467825 WRNQ14191 1432 aaPredicted RBP eCLIP26.73■■□□□ 1.87
RPL13A-202ENST00000467825 GRIN2BQ13224 1484 aa26.72■■□□□ 1.87
RPL13A-202ENST00000467825 SYNJ1O43426 1573 aa26.71■■□□□ 1.87
RPL13A-202ENST00000467825 TOP2BQ02880 1626 aa26.71■■□□□ 1.87
RPL13A-202ENST00000467825 BIVM-ERCC5R4GMW8 1640 aa26.7■■□□□ 1.86
RPL13A-202ENST00000467825 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
RPL13A-202ENST00000467825 FBLN2P98095 1184 aa26.68■■□□□ 1.86
RPL13A-202ENST00000467825 GAPVD1Q14C86 1478 aa26.68■■□□□ 1.86
RPL13A-202ENST00000467825 RIMBP3CA6NJZ7 1639 aa26.67■■□□□ 1.86
RPL13A-202ENST00000467825 RIMBP3BA6NNM3 1639 aa26.67■■□□□ 1.86
RPL13A-202ENST00000467825 RIMBP3Q9UFD9 1639 aa26.67■■□□□ 1.86
RPL13A-202ENST00000467825 ABCA5Q8WWZ7 1642 aa26.66■■□□□ 1.86
RPL13A-202ENST00000467825 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
RPL13A-202ENST00000467825 SYNJ2O15056 1496 aa26.59■■□□□ 1.85
RPL13A-202ENST00000467825 PBRM1Q86U86 1689 aa26.59■■□□□ 1.85
RPL13A-202ENST00000467825 CHMP7Q8WUX9 453 aaPredicted RBP26.57■■□□□ 1.84
RPL13A-202ENST00000467825 CLASP1Q7Z460 1538 aa26.55■■□□□ 1.84
RPL13A-202ENST00000467825 ARAP1Q96P48 1450 aa26.44■■□□□ 1.82
RPL13A-202ENST00000467825 ADAMTS12P58397 1594 aa26.42■■□□□ 1.82
RPL13A-202ENST00000467825 CYB5RLQ6IPT4 315 aa26.4■■□□□ 1.82
RPL13A-202ENST00000467825 GRIN2AQ12879 1464 aa26.39■■□□□ 1.82
RPL13A-202ENST00000467825 ERICH3Q5RHP9 1530 aa26.39■■□□□ 1.81
RPL13A-202ENST00000467825 FHAD1B1AJZ9 1412 aa26.36■■□□□ 1.81
RPL13A-202ENST00000467825 NUP160Q12769 1436 aa26.33■■□□□ 1.81
RPL13A-202ENST00000467825 CEP170Q5SW79 1584 aa26.3■■□□□ 1.8
RPL13A-202ENST00000467825 IGF1RP08069 1367 aa26.2■■□□□ 1.79
RPL13A-202ENST00000467825 ERCC6L2Q5T890 1561 aa26.18■■□□□ 1.78
RPL13A-202ENST00000467825 KIF27Q86VH2 1401 aa26.17■■□□□ 1.78
RPL13A-202ENST00000467825 SHROOM2Q13796 1616 aa26.14■■□□□ 1.78
RPL13A-202ENST00000467825 RUSC2Q8N2Y8 1516 aa26.04■■□□□ 1.76
RPL13A-202ENST00000467825 CUL7Q14999 1698 aa26.03■■□□□ 1.76
RPL13A-202ENST00000467825 JPH4Q96JJ6 628 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms