RNA–Protein interactions for RNA: ENST00000391857.8

RPL13A-201, Transcript of ribosomal protein L13a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL13A, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-201ENST00000391857 NISCHQ9Y2I1 1504 aa36.89■■■■□ 3.5
RPL13A-201ENST00000391857 ABCC9O60706 1549 aa34.08■■■■□ 3.05
RPL13A-201ENST00000391857 CCDC180Q9P1Z9 1646 aa33.24■■■□□ 2.91
RPL13A-201ENST00000391857 DNAJC5BQ9UF47 199 aa32.73■■■□□ 2.83
RPL13A-201ENST00000391857 RB1CC1Q8TDY2 1594 aa32.05■■■□□ 2.72
RPL13A-201ENST00000391857 PABPN1Q86U42 306 aaKnown RBP eCLIP31.71■■■□□ 2.674e-6■□□□□ 9.3
RPL13A-201ENST00000391857 NACADO15069 1562 aa31.69■■■□□ 2.66
RPL13A-201ENST00000391857 DCAF8L2P0C7V8 631 aa31.52■■■□□ 2.64
RPL13A-201ENST00000391857 UNC13AQ9UPW8 1703 aa31.19■■■□□ 2.58
RPL13A-201ENST00000391857 BICRAQ9NZM4 1560 aa31.19■■■□□ 2.58
RPL13A-201ENST00000391857 MYO15BQ96JP2 1530 aa31.07■■■□□ 2.56
RPL13A-201ENST00000391857 CECR2Q9BXF3 1484 aa30.77■■■□□ 2.52
RPL13A-201ENST00000391857 CC2D2AQ9P2K1 1620 aa30.68■■■□□ 2.5
RPL13A-201ENST00000391857 SHROOM4Q9ULL8 1493 aa30.67■■■□□ 2.5
RPL13A-201ENST00000391857 DNAJC5Q9H3Z4 198 aa30.54■■■□□ 2.48
RPL13A-201ENST00000391857 EIF4G1Q04637 1599 aaKnown RBP30.46■■■□□ 2.47
RPL13A-201ENST00000391857 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
RPL13A-201ENST00000391857 ZCCHC6Q5VYS8 1495 aaKnown RBP30.4■■■□□ 2.46
RPL13A-201ENST00000391857 SCRIBQ14160 1630 aa30.3■■■□□ 2.44
RPL13A-201ENST00000391857 CUX2O14529 1486 aa29.63■■■□□ 2.33
RPL13A-201ENST00000391857 ERCC6Q03468 1493 aa29.43■■■□□ 2.3
RPL13A-201ENST00000391857 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
RPL13A-201ENST00000391857 ATAD2BQ9ULI0 1458 aa29.15■■■□□ 2.26
RPL13A-201ENST00000391857 NESP48681 1621 aa29.09■■■□□ 2.25
RPL13A-201ENST00000391857 HMGXB3Q12766 1538 aa28.97■■■□□ 2.23
RPL13A-201ENST00000391857 SMARCA2P51531 1590 aa28.95■■■□□ 2.22
RPL13A-201ENST00000391857 TRIM41Q8WV44 630 aa28.85■■■□□ 2.21
RPL13A-201ENST00000391857 SMARCA4P51532 1647 aa28.84■■■□□ 2.21
RPL13A-201ENST00000391857 THOC2Q8NI27 1593 aaKnown RBP28.83■■■□□ 2.21
RPL13A-201ENST00000391857 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
RPL13A-201ENST00000391857 LAMC3Q9Y6N6 1575 aa28.69■■■□□ 2.18
RPL13A-201ENST00000391857 BAZ1AQ9NRL2 1556 aaPredicted RBP28.63■■■□□ 2.17
RPL13A-201ENST00000391857 PDS5BQ9NTI5 1447 aa28.63■■■□□ 2.17
RPL13A-201ENST00000391857 PEG3Q9GZU2 1588 aa28.61■■■□□ 2.17
RPL13A-201ENST00000391857 KIF21AQ7Z4S6 1674 aa28.53■■■□□ 2.16
RPL13A-201ENST00000391857 CADPSQ9ULU8 1353 aa28.45■■■□□ 2.14
RPL13A-201ENST00000391857 MROH2BQ7Z745 1585 aa28.42■■■□□ 2.14
RPL13A-201ENST00000391857 MRC2Q9UBG0 1479 aa28.4■■■□□ 2.14
RPL13A-201ENST00000391857 WDR62O43379 1518 aa28.33■■■□□ 2.13
RPL13A-201ENST00000391857 OSCARQ8IYS5 282 aa28.27■■■□□ 2.12
RPL13A-201ENST00000391857 CEP164Q9UPV0 1460 aa28.12■■■□□ 2.09
RPL13A-201ENST00000391857 FANCD2Q9BXW9 1451 aa28.07■■■□□ 2.08
RPL13A-201ENST00000391857 WIZO95785 1651 aa27.97■■■□□ 2.07
RPL13A-201ENST00000391857 CFTRP13569 1480 aa27.95■■■□□ 2.06
RPL13A-201ENST00000391857 URB2Q14146 1524 aaKnown RBP27.88■■■□□ 2.05
RPL13A-201ENST00000391857 RIMBP3CA6NJZ7 1639 aa27.81■■■□□ 2.04
RPL13A-201ENST00000391857 RIMBP3BA6NNM3 1639 aa27.81■■■□□ 2.04
RPL13A-201ENST00000391857 RIMBP3Q9UFD9 1639 aa27.81■■■□□ 2.04
RPL13A-201ENST00000391857 ARHGEF11O15085 1522 aa27.72■■■□□ 2.03
RPL13A-201ENST00000391857 ZNF608Q9ULD9 1512 aaPredicted RBP27.67■■■□□ 2.02
RPL13A-201ENST00000391857 CYB5RLQ6IPT4 315 aa27.66■■■□□ 2.02
RPL13A-201ENST00000391857 RSF1Q96T23 1441 aaPredicted RBP27.63■■■□□ 2.01
RPL13A-201ENST00000391857 IFT140Q96RY7 1462 aa27.63■■■□□ 2.01
RPL13A-201ENST00000391857 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
RPL13A-201ENST00000391857 TRHP20396 242 aaPredicted RBP27.54■■■□□ 2
RPL13A-201ENST00000391857 TOPBP1Q92547 1522 aa27.45■■□□□ 1.98
RPL13A-201ENST00000391857 ARAP1Q96P48 1450 aa27.42■■□□□ 1.98
RPL13A-201ENST00000391857 EIF4G3O43432 1585 aaKnown RBP27.36■■□□□ 1.97
RPL13A-201ENST00000391857 CCDC88BA6NC98 1476 aa27.36■■□□□ 1.97
RPL13A-201ENST00000391857 AQRO60306 1485 aaKnown RBP eCLIP27.36■■□□□ 1.975e-18■■■■■ 39.2
RPL13A-201ENST00000391857 ABCC8Q09428 1581 aa27.34■■□□□ 1.97
RPL13A-201ENST00000391857 FBLN2P98095 1184 aa27.33■■□□□ 1.97
RPL13A-201ENST00000391857 PRDM2Q13029 1718 aa27.33■■□□□ 1.96
RPL13A-201ENST00000391857 DNMBPQ6XZF7 1577 aa27.23■■□□□ 1.95
RPL13A-201ENST00000391857 CHD1O14646 1710 aa27.23■■□□□ 1.95
RPL13A-201ENST00000391857 AEBP2Q6ZN18 517 aaPredicted RBP27.22■■□□□ 1.95
RPL13A-201ENST00000391857 TARBP1Q13395 1621 aaKnown RBP27.21■■□□□ 1.95
RPL13A-201ENST00000391857 POLA1P09884 1462 aaPredicted RBP27.13■■□□□ 1.93
RPL13A-201ENST00000391857 TDRD9Q8NDG6 1382 aaKnown RBP27.1■■□□□ 1.93
RPL13A-201ENST00000391857 RAD54L2Q9Y4B4 1467 aa27.08■■□□□ 1.93
RPL13A-201ENST00000391857 SOGA1O94964 1423 aa27.04■■□□□ 1.92
RPL13A-201ENST00000391857 CHMP7Q8WUX9 453 aaPredicted RBP27.03■■□□□ 1.92
RPL13A-201ENST00000391857 CLASP1Q7Z460 1538 aa27.02■■□□□ 1.92
RPL13A-201ENST00000391857 SNAPC4Q5SXM2 1469 aa27■■□□□ 1.91
RPL13A-201ENST00000391857 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
RPL13A-201ENST00000391857 MAGI1Q96QZ7 1491 aaPredicted RBP26.89■■□□□ 1.9
RPL13A-201ENST00000391857 FGD5Q6ZNL6 1462 aa26.86■■□□□ 1.89
RPL13A-201ENST00000391857 GRIN2BQ13224 1484 aa26.85■■□□□ 1.89
RPL13A-201ENST00000391857 WDR97A6NE52 1622 aa26.84■■□□□ 1.89
RPL13A-201ENST00000391857 SYNJ2O15056 1496 aa26.83■■□□□ 1.89
RPL13A-201ENST00000391857 GAPVD1Q14C86 1478 aa26.83■■□□□ 1.89
RPL13A-201ENST00000391857 CUX1P39880 1505 aa26.71■■□□□ 1.87
RPL13A-201ENST00000391857 ERCC6L2Q5T890 1561 aa26.58■■□□□ 1.85
RPL13A-201ENST00000391857 ABCA10Q8WWZ4 1543 aa26.52■■□□□ 1.84
RPL13A-201ENST00000391857 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
RPL13A-201ENST00000391857 GRIN2AQ12879 1464 aa26.49■■□□□ 1.83
RPL13A-201ENST00000391857 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
RPL13A-201ENST00000391857 NUP160Q12769 1436 aa26.46■■□□□ 1.83
RPL13A-201ENST00000391857 CEP170Q5SW79 1584 aa26.45■■□□□ 1.82
RPL13A-201ENST00000391857 SHROOM2Q13796 1616 aa26.32■■□□□ 1.8
RPL13A-201ENST00000391857 FHAD1B1AJZ9 1412 aa26.31■■□□□ 1.8
RPL13A-201ENST00000391857 ADAMTS12P58397 1594 aa26.31■■□□□ 1.8
RPL13A-201ENST00000391857 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
RPL13A-201ENST00000391857 FAM69CQ0P6D2 419 aa26.29■■□□□ 1.8
RPL13A-201ENST00000391857 KIF13AQ9H1H9 1805 aa26.28■■□□□ 1.8
RPL13A-201ENST00000391857 PRG4Q92954 1404 aaPredicted RBP26.27■■□□□ 1.8
RPL13A-201ENST00000391857 JPH4Q96JJ6 628 aa26.26■■□□□ 1.79
RPL13A-201ENST00000391857 KDM4FA0A1W2PPD8 638 aa26.24■■□□□ 1.79
RPL13A-201ENST00000391857 ABCC10Q5T3U5 1492 aa26.23■■□□□ 1.79
RPL13A-201ENST00000391857 NPM1P06748 294 aaKnown RBP eCLIP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms