RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.02
PTPRS-206ENST00000588552 NISCHQ9Y2I1 1504 aa27.44■■□□□ 1.98
PTPRS-206ENST00000588552 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
PTPRS-206ENST00000588552 SHROOM4Q9ULL8 1493 aa25.93■■□□□ 1.74
PTPRS-206ENST00000588552 EHMT2Q96KQ7 1210 aa25.05■■□□□ 1.6
PTPRS-206ENST00000588552 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
PTPRS-206ENST00000588552 APLP2Q06481 763 aa24.53■■□□□ 1.52
PTPRS-206ENST00000588552 TRIM41Q8WV44 630 aa24.26■■□□□ 1.47
PTPRS-206ENST00000588552 TTBK1Q5TCY1 1321 aaPredicted RBP24.14■■□□□ 1.45
PTPRS-206ENST00000588552 RANGAP1P46060 587 aaPredicted RBP24.1■■□□□ 1.45
PTPRS-206ENST00000588552 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
PTPRS-206ENST00000588552 UBTFP17480 764 aaKnown RBP23.89■■□□□ 1.42
PTPRS-206ENST00000588552 ATP1B4Q9UN42 357 aaPredicted RBP23.85■■□□□ 1.41
PTPRS-206ENST00000588552 ABCC9O60706 1549 aa23.68■■□□□ 1.38
PTPRS-206ENST00000588552 CCER1Q8TC90 406 aaPredicted RBP23.53■■□□□ 1.36
PTPRS-206ENST00000588552 PELP1Q8IZL8 1130 aaKnown RBP23.49■■□□□ 1.35
PTPRS-206ENST00000588552 ZEB1P37275 1124 aaPredicted RBP23.45■■□□□ 1.34
PTPRS-206ENST00000588552 PABPN1Q86U42 306 aaKnown RBP eCLIP23.41■■□□□ 1.341e-6■■□□□ 13.3
PTPRS-206ENST00000588552 PPARGC1BQ86YN6 1023 aaKnown RBP23.35■■□□□ 1.33
PTPRS-206ENST00000588552 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
PTPRS-206ENST00000588552 LOC105371045A0A1W2PR82 267 aa23.19■■□□□ 1.3
PTPRS-206ENST00000588552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.13■■□□□ 1.29
PTPRS-206ENST00000588552 HNRNPUL2Q1KMD3 747 aaKnown RBP23.13■■□□□ 1.29
PTPRS-206ENST00000588552 TRIM26Q12899 539 aaPredicted RBP23.11■■□□□ 1.29
PTPRS-206ENST00000588552 CENPBP07199 599 aaPredicted RBP23.02■■□□□ 1.28
PTPRS-206ENST00000588552 ITGAEP38570 1179 aa23.01■■□□□ 1.27
PTPRS-206ENST00000588552 MYT1LQ9UL68 1186 aa22.93■■□□□ 1.26
PTPRS-206ENST00000588552 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
PTPRS-206ENST00000588552 YTHDC1Q96MU7 727 aaKnown RBP22.71■■□□□ 1.23
PTPRS-206ENST00000588552 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
PTPRS-206ENST00000588552 CCDC180Q9P1Z9 1646 aa22.66■■□□□ 1.22
PTPRS-206ENST00000588552 HRCP23327 699 aa22.59■■□□□ 1.21
PTPRS-206ENST00000588552 NEFLP07196 543 aa22.58■■□□□ 1.21
PTPRS-206ENST00000588552 POLR3GLQ9BT43 218 aa22.55■■□□□ 1.2
PTPRS-206ENST00000588552 FAM50AQ14320 339 aaKnown RBP22.54■■□□□ 1.2
PTPRS-206ENST00000588552 FBLN2P98095 1184 aa22.52■■□□□ 1.2
PTPRS-206ENST00000588552 ERICH6Q7L0X2 663 aa22.44■■□□□ 1.18
PTPRS-206ENST00000588552 CSRNP3Q8WYN3 585 aa22.37■■□□□ 1.17
PTPRS-206ENST00000588552 TRIM52Q96A61 297 aa22.34■■□□□ 1.17
PTPRS-206ENST00000588552 CNGB1Q14028 1251 aaPredicted RBP22.29■■□□□ 1.16
PTPRS-206ENST00000588552 P3H3Q8IVL6 736 aa22.27■■□□□ 1.16
PTPRS-206ENST00000588552 RB1CC1Q8TDY2 1594 aa22.24■■□□□ 1.15
PTPRS-206ENST00000588552 NEUROD1Q13562 356 aa22.18■■□□□ 1.14
PTPRS-206ENST00000588552 SLC4A1APQ9BWU0 796 aaKnown RBP22.17■■□□□ 1.14
PTPRS-206ENST00000588552 ARID3CA6NKF2 412 aa22.17■■□□□ 1.14
PTPRS-206ENST00000588552 DIEXFQ68CQ4 756 aaKnown RBP22.06■■□□□ 1.12
PTPRS-206ENST00000588552 NACADO15069 1562 aa22.04■■□□□ 1.12
PTPRS-206ENST00000588552 ZNF326Q5BKZ1 582 aaKnown RBP22■■□□□ 1.11
PTPRS-206ENST00000588552 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
PTPRS-206ENST00000588552 ZNF777Q9ULD5 760 aaPredicted RBP21.96■■□□□ 1.11
PTPRS-206ENST00000588552 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.09
PTPRS-206ENST00000588552 DAXXQ9UER7 740 aaPredicted RBP21.77■■□□□ 1.08
PTPRS-206ENST00000588552 BAZ1BQ9UIG0 1483 aaKnown RBP21.75■■□□□ 1.07
PTPRS-206ENST00000588552 ANP32CO43423 234 aa21.75■■□□□ 1.07
PTPRS-206ENST00000588552 NPM1P06748 294 aaKnown RBP eCLIP21.73■■□□□ 1.07
PTPRS-206ENST00000588552 CHMP7Q8WUX9 453 aaPredicted RBP21.72■■□□□ 1.07
PTPRS-206ENST00000588552 ZNF316A6NFI3 1004 aaPredicted RBP21.7■■□□□ 1.07
PTPRS-206ENST00000588552 DCAF1Q9Y4B6 1507 aa21.69■■□□□ 1.06
PTPRS-206ENST00000588552 BCANQ96GW7 911 aa21.68■■□□□ 1.06
PTPRS-206ENST00000588552 WRNQ14191 1432 aaPredicted RBP eCLIP21.6■■□□□ 1.05
PTPRS-206ENST00000588552 ESF1Q9H501 851 aaKnown RBP21.59■■□□□ 1.05
PTPRS-206ENST00000588552 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
PTPRS-206ENST00000588552 CLIP1P30622 1438 aa21.59■■□□□ 1.05
PTPRS-206ENST00000588552 CHIC2Q9UKJ5 165 aa21.56■■□□□ 1.04
PTPRS-206ENST00000588552 EEA1Q15075 1411 aa21.55■■□□□ 1.04
PTPRS-206ENST00000588552 MTUS2Q5JR59 1369 aa21.55■■□□□ 1.04
PTPRS-206ENST00000588552 CLSPNQ9HAW4 1339 aa21.55■■□□□ 1.04
PTPRS-206ENST00000588552 TONSLQ96HA7 1378 aa21.53■■□□□ 1.04
PTPRS-206ENST00000588552 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.04
PTPRS-206ENST00000588552 CHGAP10645 457 aaKnown RBP21.5■■□□□ 1.03
PTPRS-206ENST00000588552 GOLGA3Q08378 1498 aa21.49■■□□□ 1.03
PTPRS-206ENST00000588552 TSPY4P0CV99 314 aa21.46■■□□□ 1.03
PTPRS-206ENST00000588552 TSPY10P0CW01 314 aa21.46■■□□□ 1.03
PTPRS-206ENST00000588552 STAG3Q9UJ98 1225 aa21.46■■□□□ 1.03
PTPRS-206ENST00000588552 KIF27Q86VH2 1401 aa21.45■■□□□ 1.02
PTPRS-206ENST00000588552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.44■■□□□ 1.021e-6■□□□□ 9.8
PTPRS-206ENST00000588552 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
PTPRS-206ENST00000588552 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
PTPRS-206ENST00000588552 NEFMP07197 916 aa21.39■■□□□ 1.01
PTPRS-206ENST00000588552 ERCC6Q03468 1493 aa21.37■■□□□ 1.01
PTPRS-206ENST00000588552 PLPPR3Q6T4P5 718 aa21.37■■□□□ 1.01
PTPRS-206ENST00000588552 SLC24A1O60721 1099 aa21.34■■□□□ 1.01
PTPRS-206ENST00000588552 PLEKHD1A6NEE1 506 aa21.32■■□□□ 1
PTPRS-206ENST00000588552 KCNH8Q96L42 1107 aa21.32■■□□□ 1
PTPRS-206ENST00000588552 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
PTPRS-206ENST00000588552 GTF3C3Q9Y5Q9 886 aa21.31■■□□□ 1
PTPRS-206ENST00000588552 CANXP27824 592 aaKnown RBP21.3■■□□□ 1
PTPRS-206ENST00000588552 TNIKQ9UKE5 1360 aa21.28■■□□□ 1
PTPRS-206ENST00000588552 ZBTB47Q9UFB7 747 aaPredicted RBP21.26■□□□□ 0.99
PTPRS-206ENST00000588552 RRP7BPQ9NSQ0 103 aa21.26■□□□□ 0.99
PTPRS-206ENST00000588552 MROH2BQ7Z745 1585 aa21.25■□□□□ 0.99
PTPRS-206ENST00000588552 DDX10Q13206 875 aaKnown RBP21.22■□□□□ 0.99
PTPRS-206ENST00000588552 KDM2AQ9Y2K7 1162 aa21.22■□□□□ 0.99
PTPRS-206ENST00000588552 MYT1Q01538 1121 aa21.21■□□□□ 0.99
PTPRS-206ENST00000588552 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
PTPRS-206ENST00000588552 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
PTPRS-206ENST00000588552 CFDP1Q9UEE9 299 aaPredicted RBP21.15■□□□□ 0.98
PTPRS-206ENST00000588552 CUX2O14529 1486 aa21.14■□□□□ 0.98
PTPRS-206ENST00000588552 RTL5Q5HYW3 569 aaPredicted RBP21.12■□□□□ 0.97
PTPRS-206ENST00000588552 CARMIL1Q5VZK9 1371 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms