RNA–Protein interactions for RNA: ENST00000474171.1

RPL13A-205, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 521 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-205ENST00000474171 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
RPL13A-205ENST00000474171 CCDC180Q9P1Z9 1646 aa25.08■■□□□ 1.61
RPL13A-205ENST00000474171 ABCC9O60706 1549 aa24.9■■□□□ 1.58
RPL13A-205ENST00000474171 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
RPL13A-205ENST00000474171 NACADO15069 1562 aa23.61■■□□□ 1.37
RPL13A-205ENST00000474171 DCAF8L2P0C7V8 631 aa23.52■■□□□ 1.36
RPL13A-205ENST00000474171 UNC13AQ9UPW8 1703 aa23.39■■□□□ 1.34
RPL13A-205ENST00000474171 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
RPL13A-205ENST00000474171 ZCCHC6Q5VYS8 1495 aaKnown RBP23.26■■□□□ 1.31
RPL13A-205ENST00000474171 DNAJC5BQ9UF47 199 aa23.22■■□□□ 1.31
RPL13A-205ENST00000474171 PABPN1Q86U42 306 aaKnown RBP eCLIP23.19■■□□□ 1.3
RPL13A-205ENST00000474171 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.29
RPL13A-205ENST00000474171 DCAF1Q9Y4B6 1507 aa23.11■■□□□ 1.29
RPL13A-205ENST00000474171 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
RPL13A-205ENST00000474171 SHROOM4Q9ULL8 1493 aa22.68■■□□□ 1.22
RPL13A-205ENST00000474171 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
RPL13A-205ENST00000474171 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
RPL13A-205ENST00000474171 CECR2Q9BXF3 1484 aa22.37■■□□□ 1.17
RPL13A-205ENST00000474171 SMARCA4P51532 1647 aa21.85■■□□□ 1.09
RPL13A-205ENST00000474171 NCAPD3P42695 1498 aa21.79■■□□□ 1.08
RPL13A-205ENST00000474171 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.08
RPL13A-205ENST00000474171 BAZ1AQ9NRL2 1556 aaPredicted RBP21.71■■□□□ 1.07
RPL13A-205ENST00000474171 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
RPL13A-205ENST00000474171 HMGXB3Q12766 1538 aa21.66■■□□□ 1.06
RPL13A-205ENST00000474171 MROH2BQ7Z745 1585 aa21.64■■□□□ 1.05
RPL13A-205ENST00000474171 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
RPL13A-205ENST00000474171 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
RPL13A-205ENST00000474171 NESP48681 1621 aa21.48■■□□□ 1.03
RPL13A-205ENST00000474171 WIZO95785 1651 aa21.43■■□□□ 1.02
RPL13A-205ENST00000474171 ERCC6Q03468 1493 aa21.41■■□□□ 1.02
RPL13A-205ENST00000474171 CUX2O14529 1486 aa21.31■■□□□ 1
RPL13A-205ENST00000474171 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
RPL13A-205ENST00000474171 KIF21AQ7Z4S6 1674 aa21.26■□□□□ 0.99
RPL13A-205ENST00000474171 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
RPL13A-205ENST00000474171 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
RPL13A-205ENST00000474171 CADPSQ9ULU8 1353 aa21.12■□□□□ 0.97
RPL13A-205ENST00000474171 PDS5BQ9NTI5 1447 aa21.1■□□□□ 0.97
RPL13A-205ENST00000474171 DNAJC5Q9H3Z4 198 aa21.09■□□□□ 0.97
RPL13A-205ENST00000474171 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
RPL13A-205ENST00000474171 MRC2Q9UBG0 1479 aa20.96■□□□□ 0.95
RPL13A-205ENST00000474171 CFTRP13569 1480 aa20.94■□□□□ 0.94
RPL13A-205ENST00000474171 WDR62O43379 1518 aa20.93■□□□□ 0.94
RPL13A-205ENST00000474171 FANCD2Q9BXW9 1451 aa20.92■□□□□ 0.94
RPL13A-205ENST00000474171 CEP164Q9UPV0 1460 aa20.91■□□□□ 0.94
RPL13A-205ENST00000474171 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
RPL13A-205ENST00000474171 CCDC88BA6NC98 1476 aa20.86■□□□□ 0.93
RPL13A-205ENST00000474171 URB2Q14146 1524 aaKnown RBP20.78■□□□□ 0.92
RPL13A-205ENST00000474171 TOPBP1Q92547 1522 aa20.57■□□□□ 0.88
RPL13A-205ENST00000474171 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
RPL13A-205ENST00000474171 ZNF608Q9ULD9 1512 aaPredicted RBP20.49■□□□□ 0.87
RPL13A-205ENST00000474171 IFT140Q96RY7 1462 aa20.46■□□□□ 0.87
RPL13A-205ENST00000474171 ABCC8Q09428 1581 aa20.45■□□□□ 0.86
RPL13A-205ENST00000474171 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
RPL13A-205ENST00000474171 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
RPL13A-205ENST00000474171 EIF4G3O43432 1585 aaKnown RBP20.4■□□□□ 0.86
RPL13A-205ENST00000474171 POLA1P09884 1462 aaPredicted RBP20.37■□□□□ 0.85
RPL13A-205ENST00000474171 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
RPL13A-205ENST00000474171 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.841e-17■■■■■ 42.2
RPL13A-205ENST00000474171 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
RPL13A-205ENST00000474171 CUX1P39880 1505 aa20.31■□□□□ 0.84
RPL13A-205ENST00000474171 CHD1O14646 1710 aa20.27■□□□□ 0.84
RPL13A-205ENST00000474171 FGD5Q6ZNL6 1462 aa20.27■□□□□ 0.84
RPL13A-205ENST00000474171 TRIM41Q8WV44 630 aa20.27■□□□□ 0.84
RPL13A-205ENST00000474171 SOGA1O94964 1423 aa20.24■□□□□ 0.83
RPL13A-205ENST00000474171 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
RPL13A-205ENST00000474171 TDRD9Q8NDG6 1382 aaKnown RBP20.2■□□□□ 0.82
RPL13A-205ENST00000474171 RIMBP3CA6NJZ7 1639 aa20.18■□□□□ 0.82
RPL13A-205ENST00000474171 RIMBP3BA6NNM3 1639 aa20.18■□□□□ 0.82
RPL13A-205ENST00000474171 RIMBP3Q9UFD9 1639 aa20.18■□□□□ 0.82
RPL13A-205ENST00000474171 SNAPC4Q5SXM2 1469 aa20.11■□□□□ 0.81
RPL13A-205ENST00000474171 ARHGEF11O15085 1522 aa20.1■□□□□ 0.81
RPL13A-205ENST00000474171 PBRM1Q86U86 1689 aa20.09■□□□□ 0.81
RPL13A-205ENST00000474171 FBLN2P98095 1184 aa20.08■□□□□ 0.81
RPL13A-205ENST00000474171 BIVM-ERCC5R4GMW8 1640 aa20.05■□□□□ 0.8
RPL13A-205ENST00000474171 SYNJ1O43426 1573 aa20.04■□□□□ 0.8
RPL13A-205ENST00000474171 GRIN2BQ13224 1484 aa20.04■□□□□ 0.8
RPL13A-205ENST00000474171 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
RPL13A-205ENST00000474171 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.8
RPL13A-205ENST00000474171 TOP2BQ02880 1626 aa20.02■□□□□ 0.79
RPL13A-205ENST00000474171 GAPVD1Q14C86 1478 aa20.01■□□□□ 0.79
RPL13A-205ENST00000474171 MAGI1Q96QZ7 1491 aaPredicted RBP20.01■□□□□ 0.79
RPL13A-205ENST00000474171 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
RPL13A-205ENST00000474171 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
RPL13A-205ENST00000474171 SYNJ2O15056 1496 aa19.95■□□□□ 0.78
RPL13A-205ENST00000474171 CHMP7Q8WUX9 453 aaPredicted RBP19.94■□□□□ 0.78
RPL13A-205ENST00000474171 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
RPL13A-205ENST00000474171 CYB5RLQ6IPT4 315 aa19.89■□□□□ 0.77
RPL13A-205ENST00000474171 ADAMTS12P58397 1594 aa19.86■□□□□ 0.77
RPL13A-205ENST00000474171 GRIN2AQ12879 1464 aa19.8■□□□□ 0.76
RPL13A-205ENST00000474171 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
RPL13A-205ENST00000474171 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
RPL13A-205ENST00000474171 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
RPL13A-205ENST00000474171 ERCC6L2Q5T890 1561 aa19.74■□□□□ 0.75
RPL13A-205ENST00000474171 NUP160Q12769 1436 aa19.73■□□□□ 0.75
RPL13A-205ENST00000474171 SHROOM2Q13796 1616 aa19.67■□□□□ 0.74
RPL13A-205ENST00000474171 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
RPL13A-205ENST00000474171 RUSC2Q8N2Y8 1516 aa19.58■□□□□ 0.73
RPL13A-205ENST00000474171 IGF1RP08069 1367 aa19.56■□□□□ 0.72
RPL13A-205ENST00000474171 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
RPL13A-205ENST00000474171 CUL7Q14999 1698 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms