RNA–Protein interactions for RNA: ENST00000565113.5

DNAAF4-CCPG1-201, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene DNAAF4-CCPG1, Length 4,589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-201ENST00000565113 NISCHQ9Y2I1 1504 aa10.81□□□□□ -0.68
DNAAF4-CCPG1-201ENST00000565113 CCDC180Q9P1Z9 1646 aa9.31□□□□□ -0.92
DNAAF4-CCPG1-201ENST00000565113 AEBP2Q6ZN18 517 aaPredicted RBP9.13□□□□□ -0.95
DNAAF4-CCPG1-201ENST00000565113 ZCCHC6Q5VYS8 1495 aaKnown RBP9.11□□□□□ -0.95
DNAAF4-CCPG1-201ENST00000565113 SHROOM4Q9ULL8 1493 aa9.04□□□□□ -0.96
DNAAF4-CCPG1-201ENST00000565113 DCAF8L2P0C7V8 631 aa9□□□□□ -0.97
DNAAF4-CCPG1-201ENST00000565113 DCAF1Q9Y4B6 1507 aa8.92□□□□□ -0.98
DNAAF4-CCPG1-201ENST00000565113 SUPT5HO00267 1087 aaKnown RBP8.84□□□□□ -0.99
DNAAF4-CCPG1-201ENST00000565113 MYO15BQ96JP2 1530 aa8.74□□□□□ -1.01
DNAAF4-CCPG1-201ENST00000565113 ABCC9O60706 1549 aa8.67□□□□□ -1.02
DNAAF4-CCPG1-201ENST00000565113 NACADO15069 1562 aa8.65□□□□□ -1.02
DNAAF4-CCPG1-201ENST00000565113 SCRIBQ14160 1630 aa8.63□□□□□ -1.03
DNAAF4-CCPG1-201ENST00000565113 RB1CC1Q8TDY2 1594 aa8.55□□□□□ -1.04
DNAAF4-CCPG1-201ENST00000565113 CHIC1Q5VXU3 224 aa8.51□□□□□ -1.05
DNAAF4-CCPG1-201ENST00000565113 RSF1Q96T23 1441 aaPredicted RBP8.48□□□□□ -1.05
DNAAF4-CCPG1-201ENST00000565113 CECR2Q9BXF3 1484 aa8.37□□□□□ -1.07
DNAAF4-CCPG1-201ENST00000565113 MROH2BQ7Z745 1585 aa8.35□□□□□ -1.07
DNAAF4-CCPG1-201ENST00000565113 BAZ1AQ9NRL2 1556 aaPredicted RBP8.35□□□□□ -1.07
DNAAF4-CCPG1-201ENST00000565113 TRIM41Q8WV44 630 aa8.3□□□□□ -1.08
DNAAF4-CCPG1-201ENST00000565113 WIZO95785 1651 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-201ENST00000565113 UNC13AQ9UPW8 1703 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-201ENST00000565113 SMARCA4P51532 1647 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-201ENST00000565113 PABPN1Q86U42 306 aaKnown RBP eCLIP8.24□□□□□ -1.09
DNAAF4-CCPG1-201ENST00000565113 TOP2AP11388 1531 aaKnown RBP8.24□□□□□ -1.09
DNAAF4-CCPG1-201ENST00000565113 LOC105371045A0A1W2PR82 267 aa8.21□□□□□ -1.1
DNAAF4-CCPG1-201ENST00000565113 BICRAQ9NZM4 1560 aa8.2□□□□□ -1.1
DNAAF4-CCPG1-201ENST00000565113 FAM9AQ8IZU1 332 aaPredicted RBP8.16□□□□□ -1.1
DNAAF4-CCPG1-201ENST00000565113 CCDC88BA6NC98 1476 aa8.16□□□□□ -1.1
DNAAF4-CCPG1-201ENST00000565113 SMARCA2P51531 1590 aa8.14□□□□□ -1.11
DNAAF4-CCPG1-201ENST00000565113 PEG3Q9GZU2 1588 aa8.12□□□□□ -1.11
DNAAF4-CCPG1-201ENST00000565113 PCGF6Q9BYE7 350 aa8.11□□□□□ -1.11
DNAAF4-CCPG1-201ENST00000565113 EIF4G1Q04637 1599 aaKnown RBP8.11□□□□□ -1.11
DNAAF4-CCPG1-201ENST00000565113 BAZ1BQ9UIG0 1483 aaKnown RBP8.09□□□□□ -1.11
DNAAF4-CCPG1-201ENST00000565113 ATAD2BQ9ULI0 1458 aa8.08□□□□□ -1.12
DNAAF4-CCPG1-201ENST00000565113 TRIM26Q12899 539 aaPredicted RBP8.06□□□□□ -1.12
DNAAF4-CCPG1-201ENST00000565113 EHMT2Q96KQ7 1210 aa8.05□□□□□ -1.12
DNAAF4-CCPG1-201ENST00000565113 ABCC8Q09428 1581 aa8.05□□□□□ -1.12
DNAAF4-CCPG1-201ENST00000565113 HRCP23327 699 aa8.03□□□□□ -1.12
DNAAF4-CCPG1-201ENST00000565113 EEA1Q15075 1411 aa8.03□□□□□ -1.12
DNAAF4-CCPG1-201ENST00000565113 WRNQ14191 1432 aaPredicted RBP eCLIP8.01□□□□□ -1.13
DNAAF4-CCPG1-201ENST00000565113 HMGXB3Q12766 1538 aa7.98□□□□□ -1.13
DNAAF4-CCPG1-201ENST00000565113 NCAPD3P42695 1498 aa7.98□□□□□ -1.13
DNAAF4-CCPG1-201ENST00000565113 CSRNP3Q8WYN3 585 aa7.97□□□□□ -1.13
DNAAF4-CCPG1-201ENST00000565113 SOGA1O94964 1423 aa7.95□□□□□ -1.14
DNAAF4-CCPG1-201ENST00000565113 UBTFP17480 764 aaKnown RBP7.94□□□□□ -1.14
DNAAF4-CCPG1-201ENST00000565113 TNIKQ9UKE5 1360 aa7.93□□□□□ -1.14
DNAAF4-CCPG1-201ENST00000565113 GOLGA3Q08378 1498 aa7.92□□□□□ -1.14
DNAAF4-CCPG1-201ENST00000565113 SYNJ1O43426 1573 aa7.91□□□□□ -1.14
DNAAF4-CCPG1-201ENST00000565113 ZEB1P37275 1124 aaPredicted RBP7.91□□□□□ -1.14
DNAAF4-CCPG1-201ENST00000565113 CEP162Q5TB80 1403 aa7.9□□□□□ -1.14
DNAAF4-CCPG1-201ENST00000565113 CEP164Q9UPV0 1460 aa7.9□□□□□ -1.14
DNAAF4-CCPG1-201ENST00000565113 RUSC2Q8N2Y8 1516 aa7.88□□□□□ -1.15
DNAAF4-CCPG1-201ENST00000565113 TOP2BQ02880 1626 aa7.88□□□□□ -1.15
DNAAF4-CCPG1-201ENST00000565113 KIF21BO75037 1637 aa7.86□□□□□ -1.15
DNAAF4-CCPG1-201ENST00000565113 CFTRP13569 1480 aa7.86□□□□□ -1.15
DNAAF4-CCPG1-201ENST00000565113 BIVM-ERCC5R4GMW8 1640 aa7.85□□□□□ -1.15
DNAAF4-CCPG1-201ENST00000565113 PPARGC1BQ86YN6 1023 aaKnown RBP7.84□□□□□ -1.15
DNAAF4-CCPG1-201ENST00000565113 CC2D2AQ9P2K1 1620 aa7.82□□□□□ -1.16
DNAAF4-CCPG1-201ENST00000565113 CADPSQ9ULU8 1353 aa7.81□□□□□ -1.16
DNAAF4-CCPG1-201ENST00000565113 APLP2Q06481 763 aa7.81□□□□□ -1.16
DNAAF4-CCPG1-201ENST00000565113 KIF27Q86VH2 1401 aa7.81□□□□□ -1.16
DNAAF4-CCPG1-201ENST00000565113 CLIP1P30622 1438 aa7.8□□□□□ -1.16
DNAAF4-CCPG1-201ENST00000565113 CUX1P39880 1505 aa7.8□□□□□ -1.16
DNAAF4-CCPG1-201ENST00000565113 PRDM2Q13029 1718 aa7.8□□□□□ -1.16
DNAAF4-CCPG1-201ENST00000565113 RAPGEF2Q9Y4G8 1499 aa7.78□□□□□ -1.16
DNAAF4-CCPG1-201ENST00000565113 ERICH3Q5RHP9 1530 aa7.78□□□□□ -1.16
DNAAF4-CCPG1-201ENST00000565113 TTBK1Q5TCY1 1321 aaPredicted RBP7.77□□□□□ -1.16
DNAAF4-CCPG1-201ENST00000565113 RANGAP1P46060 587 aaPredicted RBP7.75□□□□□ -1.17
DNAAF4-CCPG1-201ENST00000565113 VPS8Q8N3P4 1428 aa7.75□□□□□ -1.17
DNAAF4-CCPG1-201ENST00000565113 CCER1Q8TC90 406 aaPredicted RBP7.75□□□□□ -1.17
DNAAF4-CCPG1-201ENST00000565113 PRXQ9BXM0 1461 aa7.75□□□□□ -1.17
DNAAF4-CCPG1-201ENST00000565113 FANCD2Q9BXW9 1451 aa7.73□□□□□ -1.17
DNAAF4-CCPG1-201ENST00000565113 CUX2O14529 1486 aa7.73□□□□□ -1.17
DNAAF4-CCPG1-201ENST00000565113 FGD5Q6ZNL6 1462 aa7.71□□□□□ -1.18
DNAAF4-CCPG1-201ENST00000565113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.69□□□□□ -1.18
DNAAF4-CCPG1-201ENST00000565113 DNMBPQ6XZF7 1577 aa7.68□□□□□ -1.18
DNAAF4-CCPG1-201ENST00000565113 LAMC3Q9Y6N6 1575 aa7.68□□□□□ -1.18
DNAAF4-CCPG1-201ENST00000565113 IGF1RP08069 1367 aa7.68□□□□□ -1.18
DNAAF4-CCPG1-201ENST00000565113 CARMIL1Q5VZK9 1371 aa7.67□□□□□ -1.18
DNAAF4-CCPG1-201ENST00000565113 PDS5BQ9NTI5 1447 aa7.67□□□□□ -1.18
DNAAF4-CCPG1-201ENST00000565113 ARAP1Q96P48 1450 aa7.65□□□□□ -1.18
DNAAF4-CCPG1-201ENST00000565113 TOPBP1Q92547 1522 aa7.65□□□□□ -1.18
DNAAF4-CCPG1-201ENST00000565113 NESP48681 1621 aa7.64□□□□□ -1.19
DNAAF4-CCPG1-201ENST00000565113 HNRNPUL2Q1KMD3 747 aaKnown RBP7.63□□□□□ -1.19
DNAAF4-CCPG1-201ENST00000565113 ABCA10Q8WWZ4 1543 aa7.63□□□□□ -1.19
DNAAF4-CCPG1-201ENST00000565113 POLA1P09884 1462 aaPredicted RBP7.63□□□□□ -1.19
DNAAF4-CCPG1-201ENST00000565113 RAD54L2Q9Y4B4 1467 aa7.61□□□□□ -1.19
DNAAF4-CCPG1-201ENST00000565113 ARHGAP35Q9NRY4 1499 aa7.61□□□□□ -1.19
DNAAF4-CCPG1-201ENST00000565113 CUL7Q14999 1698 aa7.6□□□□□ -1.19
DNAAF4-CCPG1-201ENST00000565113 FHAD1B1AJZ9 1412 aa7.59□□□□□ -1.19
DNAAF4-CCPG1-201ENST00000565113 URB2Q14146 1524 aaKnown RBP7.59□□□□□ -1.19
DNAAF4-CCPG1-201ENST00000565113 EFCAB5A4FU69 1503 aa7.56□□□□□ -1.2
DNAAF4-CCPG1-201ENST00000565113 KANK4Q5T7N3 995 aaPredicted RBP7.56□□□□□ -1.2
DNAAF4-CCPG1-201ENST00000565113 MAP3K1Q13233 1512 aa7.56□□□□□ -1.2
DNAAF4-CCPG1-201ENST00000565113 ATP1B4Q9UN42 357 aaPredicted RBP7.56□□□□□ -1.2
DNAAF4-CCPG1-201ENST00000565113 GAPVD1Q14C86 1478 aa7.55□□□□□ -1.2
DNAAF4-CCPG1-201ENST00000565113 TDRD9Q8NDG6 1382 aaKnown RBP7.54□□□□□ -1.2
DNAAF4-CCPG1-201ENST00000565113 P3H3Q8IVL6 736 aa7.54□□□□□ -1.2
DNAAF4-CCPG1-201ENST00000565113 RRBP1Q9P2E9 1410 aaKnown RBP7.54□□□□□ -1.2
DNAAF4-CCPG1-201ENST00000565113 KIF21AQ7Z4S6 1674 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms