RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 NISCHQ9Y2I1 1504 aa33.76■■■■□ 3
H2AFV-201ENST00000222690 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
H2AFV-201ENST00000222690 SUPT5HO00267 1087 aaKnown RBP29.69■■■□□ 2.34
H2AFV-201ENST00000222690 DCAF8L2P0C7V8 631 aa29.11■■■□□ 2.25
H2AFV-201ENST00000222690 CHIC1Q5VXU3 224 aa28.6■■■□□ 2.17
H2AFV-201ENST00000222690 ZCCHC6Q5VYS8 1495 aaKnown RBP28.54■■■□□ 2.16
H2AFV-201ENST00000222690 PCGF6Q9BYE7 350 aa28.52■■■□□ 2.16
H2AFV-201ENST00000222690 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
H2AFV-201ENST00000222690 HRCP23327 699 aa28.43■■■□□ 2.14
H2AFV-201ENST00000222690 PPARGC1BQ86YN6 1023 aaKnown RBP28.14■■■□□ 2.09
H2AFV-201ENST00000222690 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
H2AFV-201ENST00000222690 LOC105371045A0A1W2PR82 267 aa28.09■■■□□ 2.09
H2AFV-201ENST00000222690 EHMT2Q96KQ7 1210 aa27.63■■■□□ 2.01
H2AFV-201ENST00000222690 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
H2AFV-201ENST00000222690 TRIM26Q12899 539 aaPredicted RBP27.54■■■□□ 2
H2AFV-201ENST00000222690 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
H2AFV-201ENST00000222690 TRIM41Q8WV44 630 aa27.4■■□□□ 1.98
H2AFV-201ENST00000222690 SCRIBQ14160 1630 aa27.06■■□□□ 1.92
H2AFV-201ENST00000222690 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
H2AFV-201ENST00000222690 ZEB1P37275 1124 aaPredicted RBP27.03■■□□□ 1.92
H2AFV-201ENST00000222690 ABCC9O60706 1549 aa26.97■■□□□ 1.91
H2AFV-201ENST00000222690 RB1CC1Q8TDY2 1594 aa26.81■■□□□ 1.88
H2AFV-201ENST00000222690 TTBK1Q5TCY1 1321 aaPredicted RBP26.79■■□□□ 1.88
H2AFV-201ENST00000222690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.68■■□□□ 1.86
H2AFV-201ENST00000222690 CCER1Q8TC90 406 aaPredicted RBP26.64■■□□□ 1.86
H2AFV-201ENST00000222690 CECR2Q9BXF3 1484 aa26.58■■□□□ 1.85
H2AFV-201ENST00000222690 SCAF1Q9H7N4 1312 aaKnown RBP26.56■■□□□ 1.84
H2AFV-201ENST00000222690 MROH2BQ7Z745 1585 aa26.41■■□□□ 1.82
H2AFV-201ENST00000222690 PELP1Q8IZL8 1130 aaKnown RBP26.31■■□□□ 1.8
H2AFV-201ENST00000222690 WIZO95785 1651 aa26.27■■□□□ 1.8
H2AFV-201ENST00000222690 UBTFP17480 764 aaKnown RBP26.2■■□□□ 1.79
H2AFV-201ENST00000222690 DIEXFQ68CQ4 756 aaKnown RBP26.2■■□□□ 1.79
H2AFV-201ENST00000222690 NEUROD1Q13562 356 aa26.17■■□□□ 1.78
H2AFV-201ENST00000222690 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.77
H2AFV-201ENST00000222690 NACADO15069 1562 aa26.12■■□□□ 1.77
H2AFV-201ENST00000222690 CENPBP07199 599 aaPredicted RBP26.06■■□□□ 1.76
H2AFV-201ENST00000222690 GTF3C3Q9Y5Q9 886 aa26.04■■□□□ 1.76
H2AFV-201ENST00000222690 ABCC8Q09428 1581 aa26.02■■□□□ 1.76
H2AFV-201ENST00000222690 YTHDC1Q96MU7 727 aaKnown RBP26■■□□□ 1.75
H2AFV-201ENST00000222690 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
H2AFV-201ENST00000222690 RANGAP1P46060 587 aaPredicted RBP25.97■■□□□ 1.75
H2AFV-201ENST00000222690 CEP162Q5TB80 1403 aa25.95■■□□□ 1.75
H2AFV-201ENST00000222690 HNRNPUL2Q1KMD3 747 aaKnown RBP25.93■■□□□ 1.74
H2AFV-201ENST00000222690 SOGA1O94964 1423 aa25.93■■□□□ 1.74
H2AFV-201ENST00000222690 CSRNP3Q8WYN3 585 aa25.91■■□□□ 1.74
H2AFV-201ENST00000222690 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
H2AFV-201ENST00000222690 PABPN1Q86U42 306 aaKnown RBP eCLIP25.81■■□□□ 1.72
H2AFV-201ENST00000222690 ZNF316A6NFI3 1004 aaPredicted RBP25.78■■□□□ 1.72
H2AFV-201ENST00000222690 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
H2AFV-201ENST00000222690 TNIKQ9UKE5 1360 aa25.74■■□□□ 1.71
H2AFV-201ENST00000222690 APLP2Q06481 763 aa25.72■■□□□ 1.71
H2AFV-201ENST00000222690 WRNQ14191 1432 aaPredicted RBP eCLIP25.7■■□□□ 1.7
H2AFV-201ENST00000222690 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
H2AFV-201ENST00000222690 EIF4G1Q04637 1599 aaKnown RBP25.66■■□□□ 1.7
H2AFV-201ENST00000222690 SMARCA2P51531 1590 aa25.6■■□□□ 1.69
H2AFV-201ENST00000222690 SMARCA4P51532 1647 aa25.58■■□□□ 1.69
H2AFV-201ENST00000222690 MIER1Q8N108 512 aa25.58■■□□□ 1.68
H2AFV-201ENST00000222690 GOLGA3Q08378 1498 aa25.55■■□□□ 1.68
H2AFV-201ENST00000222690 EEA1Q15075 1411 aa25.52■■□□□ 1.68
H2AFV-201ENST00000222690 CLIP1P30622 1438 aa25.43■■□□□ 1.66
H2AFV-201ENST00000222690 CEP164Q9UPV0 1460 aa25.32■■□□□ 1.64
H2AFV-201ENST00000222690 ITGAEP38570 1179 aa25.25■■□□□ 1.63
H2AFV-201ENST00000222690 VPS8Q8N3P4 1428 aa25.22■■□□□ 1.63
H2AFV-201ENST00000222690 RAPGEF2Q9Y4G8 1499 aa25.2■■□□□ 1.63
H2AFV-201ENST00000222690 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
H2AFV-201ENST00000222690 UNC13AQ9UPW8 1703 aa25.15■■□□□ 1.62
H2AFV-201ENST00000222690 KANK4Q5T7N3 995 aaPredicted RBP25.06■■□□□ 1.6
H2AFV-201ENST00000222690 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
H2AFV-201ENST00000222690 KIF21BO75037 1637 aa25.02■■□□□ 1.6
H2AFV-201ENST00000222690 MYT1Q01538 1121 aa25.01■■□□□ 1.59
H2AFV-201ENST00000222690 ATAD2BQ9ULI0 1458 aa24.97■■□□□ 1.59
H2AFV-201ENST00000222690 DHX57Q6P158 1386 aaKnown RBP24.93■■□□□ 1.58
H2AFV-201ENST00000222690 BICRAQ9NZM4 1560 aa24.93■■□□□ 1.58
H2AFV-201ENST00000222690 ATP1B4Q9UN42 357 aaPredicted RBP24.88■■□□□ 1.57
H2AFV-201ENST00000222690 SUPT16HQ9Y5B9 1047 aaKnown RBP24.82■■□□□ 1.56
H2AFV-201ENST00000222690 CLSPNQ9HAW4 1339 aa24.81■■□□□ 1.56
H2AFV-201ENST00000222690 BCANQ96GW7 911 aa24.77■■□□□ 1.56
H2AFV-201ENST00000222690 PEG3Q9GZU2 1588 aa24.77■■□□□ 1.56
H2AFV-201ENST00000222690 KCNH8Q96L42 1107 aa24.75■■□□□ 1.55
H2AFV-201ENST00000222690 FAM50AQ14320 339 aaKnown RBP24.74■■□□□ 1.55
H2AFV-201ENST00000222690 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
H2AFV-201ENST00000222690 CCNB3Q8WWL7 1395 aa24.71■■□□□ 1.55
H2AFV-201ENST00000222690 P3H3Q8IVL6 736 aa24.71■■□□□ 1.55
H2AFV-201ENST00000222690 TOP2BQ02880 1626 aa24.68■■□□□ 1.54
H2AFV-201ENST00000222690 KIF27Q86VH2 1401 aa24.68■■□□□ 1.54
H2AFV-201ENST00000222690 DDX10Q13206 875 aaKnown RBP24.67■■□□□ 1.54
H2AFV-201ENST00000222690 HIRIP3Q9BW71 556 aaPredicted RBP24.66■■□□□ 1.54
H2AFV-201ENST00000222690 PRXQ9BXM0 1461 aa24.66■■□□□ 1.54
H2AFV-201ENST00000222690 SIN3AQ96ST3 1273 aa24.62■■□□□ 1.53
H2AFV-201ENST00000222690 RAB3GAP2Q9H2M9 1393 aa24.59■■□□□ 1.53
H2AFV-201ENST00000222690 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
H2AFV-201ENST00000222690 RRBP1Q9P2E9 1410 aaKnown RBP24.56■■□□□ 1.52
H2AFV-201ENST00000222690 FKBP8Q14318 412 aa24.52■■□□□ 1.52
H2AFV-201ENST00000222690 CUX1P39880 1505 aa24.51■■□□□ 1.51
H2AFV-201ENST00000222690 ARHGAP35Q9NRY4 1499 aa24.51■■□□□ 1.51
H2AFV-201ENST00000222690 TSHZ2Q9NRE2 1034 aa24.5■■□□□ 1.51
H2AFV-201ENST00000222690 TRIM52Q96A61 297 aa24.47■■□□□ 1.51
H2AFV-201ENST00000222690 CUX2O14529 1486 aa24.45■■□□□ 1.51
H2AFV-201ENST00000222690 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
H2AFV-201ENST00000222690 NEFLP07196 543 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms