RNA–Protein interactions for RNA: ENST00000379802.7

DSP-201, Transcript of desmoplakin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DSP, Length 9,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-201ENST00000379802 DCAF8L2P0C7V8 631 aa17.26■□□□□ 0.35
DSP-201ENST00000379802 PELP1Q8IZL8 1130 aaKnown RBP16.66■□□□□ 0.26
DSP-201ENST00000379802 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
DSP-201ENST00000379802 APLP2Q06481 763 aa16.1■□□□□ 0.17
DSP-201ENST00000379802 SUPT5HO00267 1087 aaKnown RBP16.05■□□□□ 0.16
DSP-201ENST00000379802 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
DSP-201ENST00000379802 CCER1Q8TC90 406 aaPredicted RBP15.86■□□□□ 0.13
DSP-201ENST00000379802 ERICH6Q7L0X2 663 aa15.85■□□□□ 0.13
DSP-201ENST00000379802 SHROOM4Q9ULL8 1493 aa15.67■□□□□ 0.1
DSP-201ENST00000379802 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
DSP-201ENST00000379802 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
DSP-201ENST00000379802 NISCHQ9Y2I1 1504 aa15.42■□□□□ 0.06
DSP-201ENST00000379802 NEFLP07196 543 aa15.41■□□□□ 0.06
DSP-201ENST00000379802 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
DSP-201ENST00000379802 RANGAP1P46060 587 aaPredicted RBP15.3■□□□□ 0.04
DSP-201ENST00000379802 DAXXQ9UER7 740 aaPredicted RBP15.29■□□□□ 0.04
DSP-201ENST00000379802 PCGF6Q9BYE7 350 aa15.25■□□□□ 0.03
DSP-201ENST00000379802 ZEB1P37275 1124 aaPredicted RBP15.16■□□□□ 0.02
DSP-201ENST00000379802 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
DSP-201ENST00000379802 MYT1LQ9UL68 1186 aa15.11■□□□□ 0.01
DSP-201ENST00000379802 MYT1Q01538 1121 aa15.09■□□□□ 0.01
DSP-201ENST00000379802 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
DSP-201ENST00000379802 TRIM41Q8WV44 630 aa14.94□□□□□ -0.02
DSP-201ENST00000379802 POLR3GLQ9BT43 218 aa14.87□□□□□ -0.03
DSP-201ENST00000379802 SLC4A1APQ9BWU0 796 aaKnown RBP14.86□□□□□ -0.03
DSP-201ENST00000379802 CHIC1Q5VXU3 224 aa14.85□□□□□ -0.03
DSP-201ENST00000379802 ZNF316A6NFI3 1004 aaPredicted RBP14.85□□□□□ -0.03
DSP-201ENST00000379802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.85□□□□□ -0.03
DSP-201ENST00000379802 HNRNPUL2Q1KMD3 747 aaKnown RBP14.85□□□□□ -0.03
DSP-201ENST00000379802 CLSPNQ9HAW4 1339 aa14.76□□□□□ -0.05
DSP-201ENST00000379802 RTL5Q5HYW3 569 aaPredicted RBP14.69□□□□□ -0.06
DSP-201ENST00000379802 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
DSP-201ENST00000379802 ITGAEP38570 1179 aa14.59□□□□□ -0.07
DSP-201ENST00000379802 CNGB1Q14028 1251 aaPredicted RBP14.57□□□□□ -0.08
DSP-201ENST00000379802 SLC24A1O60721 1099 aa14.47□□□□□ -0.09
DSP-201ENST00000379802 PPARGC1BQ86YN6 1023 aaKnown RBP14.42□□□□□ -0.1
DSP-201ENST00000379802 NEFMP07197 916 aa14.37□□□□□ -0.11
DSP-201ENST00000379802 CANXP27824 592 aaKnown RBP14.35□□□□□ -0.11
DSP-201ENST00000379802 BCANQ96GW7 911 aa14.33□□□□□ -0.12
DSP-201ENST00000379802 TRIM26Q12899 539 aaPredicted RBP14.32□□□□□ -0.12
DSP-201ENST00000379802 BCL11AQ9H165 835 aa14.27□□□□□ -0.13
DSP-201ENST00000379802 TRIM52Q96A61 297 aa14.23□□□□□ -0.13
DSP-201ENST00000379802 FAM50AQ14320 339 aaKnown RBP14.23□□□□□ -0.13
DSP-201ENST00000379802 ANP32BQ92688 251 aaKnown RBP14.19□□□□□ -0.14
DSP-201ENST00000379802 ZNF326Q5BKZ1 582 aaKnown RBP14.18□□□□□ -0.14
DSP-201ENST00000379802 ESF1Q9H501 851 aaKnown RBP14.15□□□□□ -0.14
DSP-201ENST00000379802 HRCP23327 699 aa14.14□□□□□ -0.15
DSP-201ENST00000379802 CDK11BP21127 795 aaKnown RBP14.11□□□□□ -0.15
DSP-201ENST00000379802 CDK11AQ9UQ88 783 aaPredicted RBP14.11□□□□□ -0.15
DSP-201ENST00000379802 HSP90AA1P07900 732 aaKnown RBP14.1□□□□□ -0.15
DSP-201ENST00000379802 ANP32CO43423 234 aa14.08□□□□□ -0.16
DSP-201ENST00000379802 FBLN2P98095 1184 aa14.04□□□□□ -0.16
DSP-201ENST00000379802 NEUROD1Q13562 356 aa14.03□□□□□ -0.16
DSP-201ENST00000379802 ANP32AP39687 249 aaKnown RBP14.02□□□□□ -0.16
DSP-201ENST00000379802 DIEXFQ68CQ4 756 aaKnown RBP14.02□□□□□ -0.17
DSP-201ENST00000379802 UPF2Q9HAU5 1272 aaKnown RBP13.97□□□□□ -0.17
DSP-201ENST00000379802 STAG3Q9UJ98 1225 aa13.97□□□□□ -0.17
DSP-201ENST00000379802 GLIPR1L2Q4G1C9 344 aa13.88□□□□□ -0.19
DSP-201ENST00000379802 PLPPR3Q6T4P5 718 aa13.87□□□□□ -0.19
DSP-201ENST00000379802 A0A0G2JS52 829 aa13.86□□□□□ -0.19
DSP-201ENST00000379802 NPM2Q86SE8 214 aaKnown RBP13.86□□□□□ -0.19
DSP-201ENST00000379802 SCAF1Q9H7N4 1312 aaKnown RBP13.84□□□□□ -0.19
DSP-201ENST00000379802 MYH16Q9H6N6 1097 aa13.78□□□□□ -0.2
DSP-201ENST00000379802 EIF5BO60841 1220 aaKnown RBP13.78□□□□□ -0.2
DSP-201ENST00000379802 ZNF777Q9ULD5 760 aaPredicted RBP13.75□□□□□ -0.21
DSP-201ENST00000379802 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
DSP-201ENST00000379802 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
DSP-201ENST00000379802 CHGAP10645 457 aaKnown RBP13.74□□□□□ -0.21
DSP-201ENST00000379802 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.74□□□□□ -0.21
DSP-201ENST00000379802 ARID3CA6NKF2 412 aa13.7□□□□□ -0.22
DSP-201ENST00000379802 ABCC9O60706 1549 aa13.65□□□□□ -0.22
DSP-201ENST00000379802 ZRSR1Q15695 479 aaKnown RBP13.65□□□□□ -0.22
DSP-201ENST00000379802 C14orf37Q86TY3 774 aa13.63□□□□□ -0.23
DSP-201ENST00000379802 TONSLQ96HA7 1378 aa13.63□□□□□ -0.23
DSP-201ENST00000379802 PABPN1Q86U42 306 aaKnown RBP eCLIP13.62□□□□□ -0.23
DSP-201ENST00000379802 GTF3C3Q9Y5Q9 886 aa13.61□□□□□ -0.23
DSP-201ENST00000379802 NCLP19338 710 aaKnown RBP13.61□□□□□ -0.23
DSP-201ENST00000379802 HAP1P54257 671 aaPredicted RBP13.61□□□□□ -0.23
DSP-201ENST00000379802 WDR43Q15061 677 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■□□□□ 10.9
DSP-201ENST00000379802 TULP1O00294 542 aaPredicted RBP13.59□□□□□ -0.23
DSP-201ENST00000379802 NPHP1O15259 732 aa13.58□□□□□ -0.24
DSP-201ENST00000379802 ARXQ96QS3 562 aa13.58□□□□□ -0.24
DSP-201ENST00000379802 ZBTB7CA1YPR0 619 aa13.57□□□□□ -0.24
DSP-201ENST00000379802 PPP1R15AO75807 674 aaPredicted RBP13.54□□□□□ -0.24
DSP-201ENST00000379802 P3H3Q8IVL6 736 aa13.54□□□□□ -0.24
DSP-201ENST00000379802 TNNT2P45379 298 aaPredicted RBP13.53□□□□□ -0.24
DSP-201ENST00000379802 CASC1Q6TDU7 716 aa13.53□□□□□ -0.24
DSP-201ENST00000379802 GOLGA6L22H0YM25 854 aa13.52□□□□□ -0.24
DSP-201ENST00000379802 BECN1Q14457 450 aa13.5□□□□□ -0.25
DSP-201ENST00000379802 TMC1Q8TDI8 760 aa13.49□□□□□ -0.25
DSP-201ENST00000379802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.252e-13■■■□□ 14.7
DSP-201ENST00000379802 CCDC136Q96JN2 1154 aa13.49□□□□□ -0.25
DSP-201ENST00000379802 TRIM44Q96DX7 344 aaPredicted RBP13.49□□□□□ -0.25
DSP-201ENST00000379802 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
DSP-201ENST00000379802 ANP32EQ9BTT0 268 aa13.48□□□□□ -0.25
DSP-201ENST00000379802 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.25
DSP-201ENST00000379802 GOLGA6L6A8MZA4 724 aa13.46□□□□□ -0.25
DSP-201ENST00000379802 CLSTN1O94985 981 aa13.45□□□□□ -0.26
DSP-201ENST00000379802 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
DSP-201ENST00000379802 PTMAP06454 111 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms