RNA–Protein interactions for RNA: ENST00000476300.1

RPL13A-207, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-207ENST00000476300 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
RPL13A-207ENST00000476300 CCDC180Q9P1Z9 1646 aa20.16■□□□□ 0.82
RPL13A-207ENST00000476300 ZCCHC6Q5VYS8 1495 aaKnown RBP19.38■□□□□ 0.69
RPL13A-207ENST00000476300 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
RPL13A-207ENST00000476300 DCAF1Q9Y4B6 1507 aa19.17■□□□□ 0.66
RPL13A-207ENST00000476300 ABCC9O60706 1549 aa19.15■□□□□ 0.66
RPL13A-207ENST00000476300 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
RPL13A-207ENST00000476300 NACADO15069 1562 aa18.89■□□□□ 0.61
RPL13A-207ENST00000476300 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
RPL13A-207ENST00000476300 AEBP2Q6ZN18 517 aaPredicted RBP18.79■□□□□ 0.6
RPL13A-207ENST00000476300 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
RPL13A-207ENST00000476300 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
RPL13A-207ENST00000476300 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
RPL13A-207ENST00000476300 UNC13AQ9UPW8 1703 aa18.16■□□□□ 0.5
RPL13A-207ENST00000476300 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
RPL13A-207ENST00000476300 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
RPL13A-207ENST00000476300 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
RPL13A-207ENST00000476300 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
RPL13A-207ENST00000476300 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
RPL13A-207ENST00000476300 BAZ1AQ9NRL2 1556 aaPredicted RBP17.89■□□□□ 0.45
RPL13A-207ENST00000476300 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.45
RPL13A-207ENST00000476300 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
RPL13A-207ENST00000476300 WIZO95785 1651 aa17.65■□□□□ 0.42
RPL13A-207ENST00000476300 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
RPL13A-207ENST00000476300 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
RPL13A-207ENST00000476300 EIF4G1Q04637 1599 aaKnown RBP17.55■□□□□ 0.4
RPL13A-207ENST00000476300 ATAD2BQ9ULI0 1458 aa17.55■□□□□ 0.4
RPL13A-207ENST00000476300 TOP2AP11388 1531 aaKnown RBP17.52■□□□□ 0.39
RPL13A-207ENST00000476300 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
RPL13A-207ENST00000476300 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
RPL13A-207ENST00000476300 CCDC88BA6NC98 1476 aa17.38■□□□□ 0.37
RPL13A-207ENST00000476300 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
RPL13A-207ENST00000476300 HMGXB3Q12766 1538 aa17.34■□□□□ 0.37
RPL13A-207ENST00000476300 CC2D2AQ9P2K1 1620 aa17.31■□□□□ 0.36
RPL13A-207ENST00000476300 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
RPL13A-207ENST00000476300 CADPSQ9ULU8 1353 aa17.03■□□□□ 0.32
RPL13A-207ENST00000476300 CFTRP13569 1480 aa17.01■□□□□ 0.31
RPL13A-207ENST00000476300 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
RPL13A-207ENST00000476300 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
RPL13A-207ENST00000476300 LAMC3Q9Y6N6 1575 aa16.82■□□□□ 0.28
RPL13A-207ENST00000476300 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
RPL13A-207ENST00000476300 PRDM2Q13029 1718 aa16.79■□□□□ 0.28
RPL13A-207ENST00000476300 FAM9AQ8IZU1 332 aaPredicted RBP16.78■□□□□ 0.28
RPL13A-207ENST00000476300 FANCD2Q9BXW9 1451 aa16.77■□□□□ 0.28
RPL13A-207ENST00000476300 NESP48681 1621 aa16.75■□□□□ 0.27
RPL13A-207ENST00000476300 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
RPL13A-207ENST00000476300 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
RPL13A-207ENST00000476300 EEA1Q15075 1411 aa16.71■□□□□ 0.27
RPL13A-207ENST00000476300 LOC105371045A0A1W2PR82 267 aa16.7■□□□□ 0.26
RPL13A-207ENST00000476300 CSRNP3Q8WYN3 585 aa16.68■□□□□ 0.26
RPL13A-207ENST00000476300 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
RPL13A-207ENST00000476300 CUX1P39880 1505 aa16.67■□□□□ 0.26
RPL13A-207ENST00000476300 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
RPL13A-207ENST00000476300 SOGA1O94964 1423 aa16.64■□□□□ 0.25
RPL13A-207ENST00000476300 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
RPL13A-207ENST00000476300 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
RPL13A-207ENST00000476300 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
RPL13A-207ENST00000476300 RUSC2Q8N2Y8 1516 aa16.55■□□□□ 0.24
RPL13A-207ENST00000476300 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
RPL13A-207ENST00000476300 URB2Q14146 1524 aaKnown RBP16.5■□□□□ 0.23
RPL13A-207ENST00000476300 KIF21AQ7Z4S6 1674 aa16.5■□□□□ 0.23
RPL13A-207ENST00000476300 ERCC6Q03468 1493 aa16.49■□□□□ 0.23
RPL13A-207ENST00000476300 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
RPL13A-207ENST00000476300 EHMT2Q96KQ7 1210 aa16.48■□□□□ 0.23
RPL13A-207ENST00000476300 UBTFP17480 764 aaKnown RBP16.47■□□□□ 0.23
RPL13A-207ENST00000476300 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
RPL13A-207ENST00000476300 CUX2O14529 1486 aa16.45■□□□□ 0.22
RPL13A-207ENST00000476300 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
RPL13A-207ENST00000476300 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
RPL13A-207ENST00000476300 GOLGA3Q08378 1498 aa16.41■□□□□ 0.22
RPL13A-207ENST00000476300 IGF1RP08069 1367 aa16.4■□□□□ 0.22
RPL13A-207ENST00000476300 TNIKQ9UKE5 1360 aa16.4■□□□□ 0.22
RPL13A-207ENST00000476300 KIF21BO75037 1637 aa16.36■□□□□ 0.21
RPL13A-207ENST00000476300 WDR62O43379 1518 aa16.35■□□□□ 0.21
RPL13A-207ENST00000476300 PRXQ9BXM0 1461 aa16.35■□□□□ 0.21
RPL13A-207ENST00000476300 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
RPL13A-207ENST00000476300 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
RPL13A-207ENST00000476300 IFT140Q96RY7 1462 aa16.32■□□□□ 0.2
RPL13A-207ENST00000476300 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
RPL13A-207ENST00000476300 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
RPL13A-207ENST00000476300 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
RPL13A-207ENST00000476300 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.19
RPL13A-207ENST00000476300 THOC2Q8NI27 1593 aaKnown RBP16.25■□□□□ 0.19
RPL13A-207ENST00000476300 CEP162Q5TB80 1403 aa16.22■□□□□ 0.19
RPL13A-207ENST00000476300 WDR97A6NE52 1622 aa16.22■□□□□ 0.19
RPL13A-207ENST00000476300 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.181e-17■■■■■ 44.9
RPL13A-207ENST00000476300 ABCA5Q8WWZ7 1642 aa16.19■□□□□ 0.18
RPL13A-207ENST00000476300 GRIN2BQ13224 1484 aa16.18■□□□□ 0.18
RPL13A-207ENST00000476300 CUL7Q14999 1698 aa16.18■□□□□ 0.18
RPL13A-207ENST00000476300 CLIP1P30622 1438 aa16.16■□□□□ 0.18
RPL13A-207ENST00000476300 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
RPL13A-207ENST00000476300 RANGAP1P46060 587 aaPredicted RBP16.13■□□□□ 0.17
RPL13A-207ENST00000476300 ZNF608Q9ULD9 1512 aaPredicted RBP16.13■□□□□ 0.17
RPL13A-207ENST00000476300 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
RPL13A-207ENST00000476300 PBRM1Q86U86 1689 aa16.06■□□□□ 0.16
RPL13A-207ENST00000476300 APLP2Q06481 763 aa16.05■□□□□ 0.16
RPL13A-207ENST00000476300 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
RPL13A-207ENST00000476300 EIF4G3O43432 1585 aaKnown RBP16.02■□□□□ 0.16
RPL13A-207ENST00000476300 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
RPL13A-207ENST00000476300 FBLN2P98095 1184 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms