RNA–Protein interactions for RNA: ENST00000353284.7

PTPRS-202, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 5 BASIC

Gene PTPRS, Length 4,518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-202ENST00000353284 NISCHQ9Y2I1 1504 aa20.77■□□□□ 0.92
PTPRS-202ENST00000353284 DCAF8L2P0C7V8 631 aa20.43■□□□□ 0.86
PTPRS-202ENST00000353284 SUPT5HO00267 1087 aaKnown RBP20.2■□□□□ 0.82
PTPRS-202ENST00000353284 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
PTPRS-202ENST00000353284 MYT1Q01538 1121 aa19.4■□□□□ 0.7
PTPRS-202ENST00000353284 PCGF6Q9BYE7 350 aa19.35■□□□□ 0.69
PTPRS-202ENST00000353284 PELP1Q8IZL8 1130 aaKnown RBP19.33■□□□□ 0.69
PTPRS-202ENST00000353284 EHMT2Q96KQ7 1210 aa19.3■□□□□ 0.68
PTPRS-202ENST00000353284 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
PTPRS-202ENST00000353284 HRCP23327 699 aa18.78■□□□□ 0.6
PTPRS-202ENST00000353284 TTBK1Q5TCY1 1321 aaPredicted RBP18.71■□□□□ 0.59
PTPRS-202ENST00000353284 ZEB1P37275 1124 aaPredicted RBP18.68■□□□□ 0.58
PTPRS-202ENST00000353284 TRIM41Q8WV44 630 aa18.61■□□□□ 0.57
PTPRS-202ENST00000353284 CHIC1Q5VXU3 224 aa18.55■□□□□ 0.56
PTPRS-202ENST00000353284 CCER1Q8TC90 406 aaPredicted RBP18.54■□□□□ 0.56
PTPRS-202ENST00000353284 CENPBP07199 599 aaPredicted RBP18.52■□□□□ 0.56
PTPRS-202ENST00000353284 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
PTPRS-202ENST00000353284 LOC105371045A0A1W2PR82 267 aa18.48■□□□□ 0.55
PTPRS-202ENST00000353284 APLP2Q06481 763 aa18.48■□□□□ 0.55
PTPRS-202ENST00000353284 TRIM26Q12899 539 aaPredicted RBP18.48■□□□□ 0.55
PTPRS-202ENST00000353284 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
PTPRS-202ENST00000353284 RANGAP1P46060 587 aaPredicted RBP18.23■□□□□ 0.51
PTPRS-202ENST00000353284 UBTFP17480 764 aaKnown RBP18.16■□□□□ 0.5
PTPRS-202ENST00000353284 ERICH6Q7L0X2 663 aa18.16■□□□□ 0.5
PTPRS-202ENST00000353284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
PTPRS-202ENST00000353284 DIEXFQ68CQ4 756 aaKnown RBP17.84■□□□□ 0.45
PTPRS-202ENST00000353284 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
PTPRS-202ENST00000353284 ATP1B4Q9UN42 357 aaPredicted RBP17.78■□□□□ 0.44
PTPRS-202ENST00000353284 ABCC9O60706 1549 aa17.78■□□□□ 0.44
PTPRS-202ENST00000353284 NEFLP07196 543 aa17.77■□□□□ 0.44
PTPRS-202ENST00000353284 GTF3C3Q9Y5Q9 886 aa17.71■□□□□ 0.43
PTPRS-202ENST00000353284 ITGAEP38570 1179 aa17.64■□□□□ 0.41
PTPRS-202ENST00000353284 ACIN1Q9UKV3 1341 aaKnown RBP17.55■□□□□ 0.4
PTPRS-202ENST00000353284 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
PTPRS-202ENST00000353284 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
PTPRS-202ENST00000353284 PABPN1Q86U42 306 aaKnown RBP eCLIP17.46■□□□□ 0.389e-7■■□□□ 12.3
PTPRS-202ENST00000353284 ZNF316A6NFI3 1004 aaPredicted RBP17.42■□□□□ 0.38
PTPRS-202ENST00000353284 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
PTPRS-202ENST00000353284 ZCCHC6Q5VYS8 1495 aaKnown RBP17.33■□□□□ 0.37
PTPRS-202ENST00000353284 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
PTPRS-202ENST00000353284 BCANQ96GW7 911 aa17.3■□□□□ 0.36
PTPRS-202ENST00000353284 CNGB1Q14028 1251 aaPredicted RBP17.22■□□□□ 0.35
PTPRS-202ENST00000353284 POLR3GLQ9BT43 218 aa17.2■□□□□ 0.34
PTPRS-202ENST00000353284 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
PTPRS-202ENST00000353284 FAM50AQ14320 339 aaKnown RBP17.14■□□□□ 0.33
PTPRS-202ENST00000353284 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.32
PTPRS-202ENST00000353284 ANP32CO43423 234 aa17.01■□□□□ 0.31
PTPRS-202ENST00000353284 MIER1Q8N108 512 aa17■□□□□ 0.31
PTPRS-202ENST00000353284 RTL5Q5HYW3 569 aaPredicted RBP16.96■□□□□ 0.31
PTPRS-202ENST00000353284 DAXXQ9UER7 740 aaPredicted RBP16.95■□□□□ 0.3
PTPRS-202ENST00000353284 SCRIBQ14160 1630 aa16.94■□□□□ 0.3
PTPRS-202ENST00000353284 CCDC180Q9P1Z9 1646 aa16.93■□□□□ 0.3
PTPRS-202ENST00000353284 CDK11AQ9UQ88 783 aaPredicted RBP16.91■□□□□ 0.3
PTPRS-202ENST00000353284 FKBP8Q14318 412 aa16.9■□□□□ 0.3
PTPRS-202ENST00000353284 TRIM52Q96A61 297 aa16.89■□□□□ 0.3
PTPRS-202ENST00000353284 GLIPR1L2Q4G1C9 344 aa16.88■□□□□ 0.29
PTPRS-202ENST00000353284 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
PTPRS-202ENST00000353284 RSF1Q96T23 1441 aaPredicted RBP16.83■□□□□ 0.28
PTPRS-202ENST00000353284 DDX10Q13206 875 aaKnown RBP16.83■□□□□ 0.28
PTPRS-202ENST00000353284 P3H3Q8IVL6 736 aa16.8■□□□□ 0.28
PTPRS-202ENST00000353284 ZNF326Q5BKZ1 582 aaKnown RBP16.73■□□□□ 0.27
PTPRS-202ENST00000353284 CEP162Q5TB80 1403 aa16.71■□□□□ 0.27
PTPRS-202ENST00000353284 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
PTPRS-202ENST00000353284 BCL11AQ9H165 835 aa16.68■□□□□ 0.26
PTPRS-202ENST00000353284 CLIP1P30622 1438 aa16.65■□□□□ 0.26
PTPRS-202ENST00000353284 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
PTPRS-202ENST00000353284 MYT1LQ9UL68 1186 aa16.64■□□□□ 0.25
PTPRS-202ENST00000353284 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
PTPRS-202ENST00000353284 TONSLQ96HA7 1378 aa16.61■□□□□ 0.25
PTPRS-202ENST00000353284 FBLN2P98095 1184 aa16.6■□□□□ 0.25
PTPRS-202ENST00000353284 ARID3CA6NKF2 412 aa16.57■□□□□ 0.24
PTPRS-202ENST00000353284 ANP32AP39687 249 aaKnown RBP16.57■□□□□ 0.24
PTPRS-202ENST00000353284 FAM9BQ8IZU0 186 aa16.56■□□□□ 0.24
PTPRS-202ENST00000353284 IRX6P78412 446 aaPredicted RBP16.56■□□□□ 0.24
PTPRS-202ENST00000353284 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
PTPRS-202ENST00000353284 NPM2Q86SE8 214 aaKnown RBP16.53■□□□□ 0.24
PTPRS-202ENST00000353284 SLC24A1O60721 1099 aa16.53■□□□□ 0.24
PTPRS-202ENST00000353284 GOLGA3Q08378 1498 aa16.52■□□□□ 0.23
PTPRS-202ENST00000353284 SLC4A1APQ9BWU0 796 aaKnown RBP16.51■□□□□ 0.23
PTPRS-202ENST00000353284 SUPT16HQ9Y5B9 1047 aaKnown RBP16.5■□□□□ 0.23
PTPRS-202ENST00000353284 EEA1Q15075 1411 aa16.5■□□□□ 0.23
PTPRS-202ENST00000353284 ANP32EQ9BTT0 268 aa16.5■□□□□ 0.23
PTPRS-202ENST00000353284 NACADO15069 1562 aa16.47■□□□□ 0.23
PTPRS-202ENST00000353284 NBR1Q14596 966 aa16.45■□□□□ 0.22
PTPRS-202ENST00000353284 CHIC2Q9UKJ5 165 aa16.42■□□□□ 0.22
PTPRS-202ENST00000353284 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
PTPRS-202ENST00000353284 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
PTPRS-202ENST00000353284 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
PTPRS-202ENST00000353284 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
PTPRS-202ENST00000353284 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
PTPRS-202ENST00000353284 SOGA1O94964 1423 aa16.38■□□□□ 0.21
PTPRS-202ENST00000353284 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
PTPRS-202ENST00000353284 SIN3AQ96ST3 1273 aa16.35■□□□□ 0.21
PTPRS-202ENST00000353284 CEP164Q9UPV0 1460 aa16.34■□□□□ 0.21
PTPRS-202ENST00000353284 ZBTB47Q9UFB7 747 aaPredicted RBP16.33■□□□□ 0.2
PTPRS-202ENST00000353284 TMC1Q8TDI8 760 aa16.3■□□□□ 0.2
PTPRS-202ENST00000353284 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.2
PTPRS-202ENST00000353284 CANXP27824 592 aaKnown RBP16.28■□□□□ 0.2
PTPRS-202ENST00000353284 MTUS2Q5JR59 1369 aa16.28■□□□□ 0.2
PTPRS-202ENST00000353284 SENP3-EIF4A1A0A087X0R7 540 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms