RNA–Protein interactions for RNA: ENST00000476268.6

RPL13A-206, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-206ENST00000476268 NISCHQ9Y2I1 1504 aa40.74■■■■■ 4.11
RPL13A-206ENST00000476268 CCDC180Q9P1Z9 1646 aa35.54■■■■□ 3.28
RPL13A-206ENST00000476268 ZCCHC6Q5VYS8 1495 aaKnown RBP34.24■■■■□ 3.07
RPL13A-206ENST00000476268 DCAF1Q9Y4B6 1507 aa33.72■■■□□ 2.99
RPL13A-206ENST00000476268 DCAF8L2P0C7V8 631 aa33.6■■■□□ 2.97
RPL13A-206ENST00000476268 ABCC9O60706 1549 aa33.46■■■□□ 2.95
RPL13A-206ENST00000476268 MYO15BQ96JP2 1530 aa33.28■■■□□ 2.92
RPL13A-206ENST00000476268 SHROOM4Q9ULL8 1493 aa33.24■■■□□ 2.91
RPL13A-206ENST00000476268 NACADO15069 1562 aa33.07■■■□□ 2.88
RPL13A-206ENST00000476268 RB1CC1Q8TDY2 1594 aa32.76■■■□□ 2.84
RPL13A-206ENST00000476268 SCRIBQ14160 1630 aa32.65■■■□□ 2.82
RPL13A-206ENST00000476268 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
RPL13A-206ENST00000476268 SUPT5HO00267 1087 aaKnown RBP32.04■■■□□ 2.72
RPL13A-206ENST00000476268 BICRAQ9NZM4 1560 aa31.75■■■□□ 2.67
RPL13A-206ENST00000476268 RSF1Q96T23 1441 aaPredicted RBP31.63■■■□□ 2.65
RPL13A-206ENST00000476268 CECR2Q9BXF3 1484 aa31.63■■■□□ 2.65
RPL13A-206ENST00000476268 PABPN1Q86U42 306 aaKnown RBP eCLIP31.57■■■□□ 2.644e-6■□□□□ 9.3
RPL13A-206ENST00000476268 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
RPL13A-206ENST00000476268 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
RPL13A-206ENST00000476268 SMARCA4P51532 1647 aa31.32■■■□□ 2.6
RPL13A-206ENST00000476268 WIZO95785 1651 aa31.24■■■□□ 2.59
RPL13A-206ENST00000476268 PEG3Q9GZU2 1588 aa30.93■■■□□ 2.54
RPL13A-206ENST00000476268 TOP2AP11388 1531 aaKnown RBP30.92■■■□□ 2.54
RPL13A-206ENST00000476268 EIF4G1Q04637 1599 aaKnown RBP30.79■■■□□ 2.52
RPL13A-206ENST00000476268 SMARCA2P51531 1590 aa30.77■■■□□ 2.52
RPL13A-206ENST00000476268 ATAD2BQ9ULI0 1458 aa30.76■■■□□ 2.52
RPL13A-206ENST00000476268 CHIC1Q5VXU3 224 aa30.73■■■□□ 2.51
RPL13A-206ENST00000476268 BAZ1BQ9UIG0 1483 aaKnown RBP30.6■■■□□ 2.49
RPL13A-206ENST00000476268 CCDC88BA6NC98 1476 aa30.59■■■□□ 2.49
RPL13A-206ENST00000476268 NCAPD3P42695 1498 aa30.49■■■□□ 2.47
RPL13A-206ENST00000476268 HMGXB3Q12766 1538 aa30.47■■■□□ 2.47
RPL13A-206ENST00000476268 CC2D2AQ9P2K1 1620 aa30.31■■■□□ 2.44
RPL13A-206ENST00000476268 TRIM41Q8WV44 630 aa30.14■■■□□ 2.42
RPL13A-206ENST00000476268 ABCC8Q09428 1581 aa29.95■■■□□ 2.39
RPL13A-206ENST00000476268 CFTRP13569 1480 aa29.84■■■□□ 2.37
RPL13A-206ENST00000476268 WRNQ14191 1432 aaPredicted RBP eCLIP29.77■■■□□ 2.36
RPL13A-206ENST00000476268 PRDM2Q13029 1718 aa29.75■■■□□ 2.35
RPL13A-206ENST00000476268 CADPSQ9ULU8 1353 aa29.71■■■□□ 2.35
RPL13A-206ENST00000476268 SYNJ1O43426 1573 aa29.64■■■□□ 2.34
RPL13A-206ENST00000476268 FAM9AQ8IZU1 332 aaPredicted RBP29.56■■■□□ 2.32
RPL13A-206ENST00000476268 LOC105371045A0A1W2PR82 267 aa29.54■■■□□ 2.32
RPL13A-206ENST00000476268 TOP2BQ02880 1626 aa29.54■■■□□ 2.32
RPL13A-206ENST00000476268 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
RPL13A-206ENST00000476268 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
RPL13A-206ENST00000476268 DNAJC5BQ9UF47 199 aa29.45■■■□□ 2.3
RPL13A-206ENST00000476268 CUX1P39880 1505 aa29.43■■■□□ 2.3
RPL13A-206ENST00000476268 EEA1Q15075 1411 aa29.42■■■□□ 2.3
RPL13A-206ENST00000476268 SOGA1O94964 1423 aa29.41■■■□□ 2.3
RPL13A-206ENST00000476268 NESP48681 1621 aa29.4■■■□□ 2.3
RPL13A-206ENST00000476268 FANCD2Q9BXW9 1451 aa29.39■■■□□ 2.3
RPL13A-206ENST00000476268 RUSC2Q8N2Y8 1516 aa29.29■■■□□ 2.28
RPL13A-206ENST00000476268 CSRNP3Q8WYN3 585 aa29.23■■■□□ 2.27
RPL13A-206ENST00000476268 PDS5BQ9NTI5 1447 aa29.23■■■□□ 2.27
RPL13A-206ENST00000476268 CEP164Q9UPV0 1460 aa29.2■■■□□ 2.27
RPL13A-206ENST00000476268 DNMBPQ6XZF7 1577 aa29.16■■■□□ 2.26
RPL13A-206ENST00000476268 EHMT2Q96KQ7 1210 aa29.12■■■□□ 2.25
RPL13A-206ENST00000476268 KIF21AQ7Z4S6 1674 aa29.1■■■□□ 2.25
RPL13A-206ENST00000476268 FGD5Q6ZNL6 1462 aa29.09■■■□□ 2.25
RPL13A-206ENST00000476268 TOPBP1Q92547 1522 aa29.08■■■□□ 2.25
RPL13A-206ENST00000476268 KIF27Q86VH2 1401 aa29.04■■■□□ 2.24
RPL13A-206ENST00000476268 KIF21BO75037 1637 aa29.03■■■□□ 2.24
RPL13A-206ENST00000476268 URB2Q14146 1524 aaKnown RBP29.01■■■□□ 2.23
RPL13A-206ENST00000476268 GOLGA3Q08378 1498 aa29■■■□□ 2.23
RPL13A-206ENST00000476268 POLA1P09884 1462 aaPredicted RBP28.93■■■□□ 2.22
RPL13A-206ENST00000476268 TNIKQ9UKE5 1360 aa28.93■■■□□ 2.22
RPL13A-206ENST00000476268 CUX2O14529 1486 aa28.92■■■□□ 2.22
RPL13A-206ENST00000476268 UBTFP17480 764 aaKnown RBP28.86■■■□□ 2.21
RPL13A-206ENST00000476268 ABCA10Q8WWZ4 1543 aa28.84■■■□□ 2.21
RPL13A-206ENST00000476268 PRXQ9BXM0 1461 aa28.84■■■□□ 2.21
RPL13A-206ENST00000476268 MRC2Q9UBG0 1479 aa28.84■■■□□ 2.21
RPL13A-206ENST00000476268 RAD54L2Q9Y4B4 1467 aa28.83■■■□□ 2.21
RPL13A-206ENST00000476268 ERICH3Q5RHP9 1530 aa28.82■■■□□ 2.2
RPL13A-206ENST00000476268 RAPGEF2Q9Y4G8 1499 aa28.81■■■□□ 2.2
RPL13A-206ENST00000476268 WDR97A6NE52 1622 aa28.77■■■□□ 2.2
RPL13A-206ENST00000476268 CEP162Q5TB80 1403 aa28.75■■■□□ 2.19
RPL13A-206ENST00000476268 IGF1RP08069 1367 aa28.74■■■□□ 2.19
RPL13A-206ENST00000476268 ERCC6Q03468 1493 aa28.7■■■□□ 2.19
RPL13A-206ENST00000476268 WDR62O43379 1518 aa28.69■■■□□ 2.18
RPL13A-206ENST00000476268 TARBP1Q13395 1621 aaKnown RBP28.65■■■□□ 2.18
RPL13A-206ENST00000476268 ABCA5Q8WWZ7 1642 aa28.61■■■□□ 2.17
RPL13A-206ENST00000476268 CARMIL1Q5VZK9 1371 aa28.61■■■□□ 2.17
RPL13A-206ENST00000476268 THOC2Q8NI27 1593 aaKnown RBP28.58■■■□□ 2.17
RPL13A-206ENST00000476268 CUL7Q14999 1698 aa28.56■■■□□ 2.16
RPL13A-206ENST00000476268 GAPVD1Q14C86 1478 aa28.55■■■□□ 2.16
RPL13A-206ENST00000476268 TDRD9Q8NDG6 1382 aaKnown RBP28.54■■■□□ 2.16
RPL13A-206ENST00000476268 CLIP1P30622 1438 aa28.53■■■□□ 2.16
RPL13A-206ENST00000476268 IFT140Q96RY7 1462 aa28.51■■■□□ 2.15
RPL13A-206ENST00000476268 PBRM1Q86U86 1689 aa28.41■■■□□ 2.14
RPL13A-206ENST00000476268 AQRO60306 1485 aaKnown RBP eCLIP28.35■■■□□ 2.137e-18■■■■■ 40.6
RPL13A-206ENST00000476268 RANGAP1P46060 587 aaPredicted RBP28.32■■■□□ 2.12
RPL13A-206ENST00000476268 GRIN2BQ13224 1484 aa28.32■■■□□ 2.12
RPL13A-206ENST00000476268 ZNF608Q9ULD9 1512 aaPredicted RBP28.31■■■□□ 2.12
RPL13A-206ENST00000476268 TRIM26Q12899 539 aaPredicted RBP28.3■■■□□ 2.12
RPL13A-206ENST00000476268 VPS8Q8N3P4 1428 aa28.3■■■□□ 2.12
RPL13A-206ENST00000476268 PCGF6Q9BYE7 350 aa28.27■■■□□ 2.12
RPL13A-206ENST00000476268 CTTNBP2Q8WZ74 1663 aa28.26■■■□□ 2.11
RPL13A-206ENST00000476268 EIF4G3O43432 1585 aaKnown RBP28.25■■■□□ 2.11
RPL13A-206ENST00000476268 FHAD1B1AJZ9 1412 aa28.24■■■□□ 2.11
RPL13A-206ENST00000476268 ARAP1Q96P48 1450 aa28.23■■■□□ 2.11
RPL13A-206ENST00000476268 ADAMTS12P58397 1594 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms