RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 NISCHQ9Y2I1 1504 aa21.68■■□□□ 1.06
CUL1-202ENST00000409469 CCDC180Q9P1Z9 1646 aa18.57■□□□□ 0.56
CUL1-202ENST00000409469 SHROOM4Q9ULL8 1493 aa18.34■□□□□ 0.53
CUL1-202ENST00000409469 DCAF8L2P0C7V8 631 aa18.28■□□□□ 0.52
CUL1-202ENST00000409469 ZCCHC6Q5VYS8 1495 aaKnown RBP18.25■□□□□ 0.51
CUL1-202ENST00000409469 ABCC9O60706 1549 aa17.76■□□□□ 0.43
CUL1-202ENST00000409469 SUPT5HO00267 1087 aaKnown RBP17.74■□□□□ 0.43
CUL1-202ENST00000409469 DCAF1Q9Y4B6 1507 aa17.69■□□□□ 0.42
CUL1-202ENST00000409469 SCRIBQ14160 1630 aa17.48■□□□□ 0.39
CUL1-202ENST00000409469 MYO15BQ96JP2 1530 aa17.32■□□□□ 0.36
CUL1-202ENST00000409469 NACADO15069 1562 aa17.29■□□□□ 0.36
CUL1-202ENST00000409469 RB1CC1Q8TDY2 1594 aa17.13■□□□□ 0.33
CUL1-202ENST00000409469 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
CUL1-202ENST00000409469 RSF1Q96T23 1441 aaPredicted RBP17.01■□□□□ 0.31
CUL1-202ENST00000409469 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
CUL1-202ENST00000409469 PABPN1Q86U42 306 aaKnown RBP eCLIP16.92■□□□□ 0.3
CUL1-202ENST00000409469 UNC13AQ9UPW8 1703 aa16.91■□□□□ 0.3
CUL1-202ENST00000409469 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.29
CUL1-202ENST00000409469 WIZO95785 1651 aa16.78■□□□□ 0.28
CUL1-202ENST00000409469 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
CUL1-202ENST00000409469 BAZ1AQ9NRL2 1556 aaPredicted RBP16.67■□□□□ 0.26
CUL1-202ENST00000409469 SMARCA4P51532 1647 aa16.61■□□□□ 0.25
CUL1-202ENST00000409469 SLC24A1O60721 1099 aa16.6■□□□□ 0.25
CUL1-202ENST00000409469 LOC105371045A0A1W2PR82 267 aa16.52■□□□□ 0.23
CUL1-202ENST00000409469 TRIM41Q8WV44 630 aa16.49■□□□□ 0.23
CUL1-202ENST00000409469 FAM9AQ8IZU1 332 aaPredicted RBP16.45■□□□□ 0.22
CUL1-202ENST00000409469 TOP2AP11388 1531 aaKnown RBP16.44■□□□□ 0.22
CUL1-202ENST00000409469 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
CUL1-202ENST00000409469 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
CUL1-202ENST00000409469 SMARCA2P51531 1590 aa16.37■□□□□ 0.21
CUL1-202ENST00000409469 ATAD2BQ9ULI0 1458 aa16.3■□□□□ 0.2
CUL1-202ENST00000409469 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
CUL1-202ENST00000409469 ABCC8Q09428 1581 aa16.29■□□□□ 0.2
CUL1-202ENST00000409469 PEG3Q9GZU2 1588 aa16.25■□□□□ 0.19
CUL1-202ENST00000409469 BAZ1BQ9UIG0 1483 aaKnown RBP16.24■□□□□ 0.19
CUL1-202ENST00000409469 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
CUL1-202ENST00000409469 SOGA1O94964 1423 aa16.03■□□□□ 0.16
CUL1-202ENST00000409469 NCAPD3P42695 1498 aa16.02■□□□□ 0.16
CUL1-202ENST00000409469 WRNQ14191 1432 aaPredicted RBP eCLIP16■□□□□ 0.155e-6■■■□□ 14.8
CUL1-202ENST00000409469 RUSC2Q8N2Y8 1516 aa16■□□□□ 0.15
CUL1-202ENST00000409469 HMGXB3Q12766 1538 aa15.97■□□□□ 0.15
CUL1-202ENST00000409469 SYNJ1O43426 1573 aa15.96■□□□□ 0.15
CUL1-202ENST00000409469 CC2D2AQ9P2K1 1620 aa15.93■□□□□ 0.14
CUL1-202ENST00000409469 PPARGC1BQ86YN6 1023 aaKnown RBP15.88■□□□□ 0.13
CUL1-202ENST00000409469 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
CUL1-202ENST00000409469 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
CUL1-202ENST00000409469 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
CUL1-202ENST00000409469 CFTRP13569 1480 aa15.79■□□□□ 0.12
CUL1-202ENST00000409469 TTBK1Q5TCY1 1321 aaPredicted RBP15.74■□□□□ 0.11
CUL1-202ENST00000409469 TOP2BQ02880 1626 aa15.74■□□□□ 0.11
CUL1-202ENST00000409469 CUX1P39880 1505 aa15.74■□□□□ 0.11
CUL1-202ENST00000409469 RANGAP1P46060 587 aaPredicted RBP15.73■□□□□ 0.11
CUL1-202ENST00000409469 TRIM26Q12899 539 aaPredicted RBP15.72■□□□□ 0.11
CUL1-202ENST00000409469 CADPSQ9ULU8 1353 aa15.72■□□□□ 0.11
CUL1-202ENST00000409469 EEA1Q15075 1411 aa15.71■□□□□ 0.11
CUL1-202ENST00000409469 CEP162Q5TB80 1403 aa15.7■□□□□ 0.1
CUL1-202ENST00000409469 NESP48681 1621 aa15.69■□□□□ 0.1
CUL1-202ENST00000409469 BIVM-ERCC5R4GMW8 1640 aa15.67■□□□□ 0.1
CUL1-202ENST00000409469 GOLGA3Q08378 1498 aa15.66■□□□□ 0.1
CUL1-202ENST00000409469 TNIKQ9UKE5 1360 aa15.65■□□□□ 0.1
CUL1-202ENST00000409469 RAPGEF2Q9Y4G8 1499 aa15.64■□□□□ 0.09
CUL1-202ENST00000409469 HRCP23327 699 aa15.62■□□□□ 0.09
CUL1-202ENST00000409469 PRKCSHP14314 528 aaPredicted RBP15.61■□□□□ 0.09
CUL1-202ENST00000409469 CEP164Q9UPV0 1460 aa15.61■□□□□ 0.09
CUL1-202ENST00000409469 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
CUL1-202ENST00000409469 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
CUL1-202ENST00000409469 KIF21BO75037 1637 aa15.56■□□□□ 0.08
CUL1-202ENST00000409469 FGD5Q6ZNL6 1462 aa15.53■□□□□ 0.08
CUL1-202ENST00000409469 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
CUL1-202ENST00000409469 CUX2O14529 1486 aa15.51■□□□□ 0.07
CUL1-202ENST00000409469 CLIP1P30622 1438 aa15.5■□□□□ 0.07
CUL1-202ENST00000409469 RAD54L2Q9Y4B4 1467 aa15.48■□□□□ 0.07
CUL1-202ENST00000409469 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
CUL1-202ENST00000409469 TOPBP1Q92547 1522 aa15.43■□□□□ 0.06
CUL1-202ENST00000409469 IGF1RP08069 1367 aa15.41■□□□□ 0.06
CUL1-202ENST00000409469 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
CUL1-202ENST00000409469 LAMC3Q9Y6N6 1575 aa15.4■□□□□ 0.06
CUL1-202ENST00000409469 URB2Q14146 1524 aaKnown RBP15.4■□□□□ 0.06
CUL1-202ENST00000409469 DNMBPQ6XZF7 1577 aa15.39■□□□□ 0.05
CUL1-202ENST00000409469 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
CUL1-202ENST00000409469 MYT1Q01538 1121 aa15.37■□□□□ 0.05
CUL1-202ENST00000409469 KIF21AQ7Z4S6 1674 aa15.36■□□□□ 0.05
CUL1-202ENST00000409469 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
CUL1-202ENST00000409469 PELP1Q8IZL8 1130 aaKnown RBP15.34■□□□□ 0.05
CUL1-202ENST00000409469 CARMIL1Q5VZK9 1371 aa15.34■□□□□ 0.05
CUL1-202ENST00000409469 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
CUL1-202ENST00000409469 TDRD9Q8NDG6 1382 aaKnown RBP15.33■□□□□ 0.04
CUL1-202ENST00000409469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.32■□□□□ 0.04
CUL1-202ENST00000409469 ARAP1Q96P48 1450 aa15.31■□□□□ 0.04
CUL1-202ENST00000409469 ABCA10Q8WWZ4 1543 aa15.28■□□□□ 0.04
CUL1-202ENST00000409469 P3H3Q8IVL6 736 aa15.28■□□□□ 0.04
CUL1-202ENST00000409469 APLP2Q06481 763 aa15.27■□□□□ 0.04
CUL1-202ENST00000409469 ARHGAP35Q9NRY4 1499 aa15.25■□□□□ 0.03
CUL1-202ENST00000409469 KANK4Q5T7N3 995 aaPredicted RBP15.22■□□□□ 0.03
CUL1-202ENST00000409469 DAXXQ9UER7 740 aaPredicted RBP15.22■□□□□ 0.03
CUL1-202ENST00000409469 HNRNPUL2Q1KMD3 747 aaKnown RBP15.21■□□□□ 0.03
CUL1-202ENST00000409469 WDR97A6NE52 1622 aa15.18■□□□□ 0.02
CUL1-202ENST00000409469 CCER1Q8TC90 406 aaPredicted RBP15.18■□□□□ 0.02
CUL1-202ENST00000409469 GAPVD1Q14C86 1478 aa15.17■□□□□ 0.02
CUL1-202ENST00000409469 ATP1B4Q9UN42 357 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms