Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.295e-9■□□□□ 11.2
U2AF2P26368 CYHR1-211ENST00000533173 6158 ntTSL 1 (best)16.78■□□□□ 0.284e-9■□□□□ 11.2
U2AF2P26368 GMNN-206ENST00000476555 580 ntTSL 316.77■□□□□ 0.281e-6■□□□□ 11.2
U2AF2P26368 CYHR1-208ENST00000528663 5821 ntTSL 1 (best)16.47■□□□□ 0.234e-9■□□□□ 11.2
U2AF2P26368 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.147e-6■□□□□ 11.2
U2AF2P26368 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.035e-9■□□□□ 11.2
U2AF2P26368 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.035e-9■□□□□ 11.2
U2AF2P26368 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.131e-6■□□□□ 11.2
U2AF2P26368 ATP6V1H-207ENST00000520188 1967 ntTSL 2 BASIC13.9□□□□□ -0.187e-6■□□□□ 11.2
U2AF2P26368 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.191e-6■□□□□ 11.2
U2AF2P26368 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.191e-6■□□□□ 11.2
U2AF2P26368 SNX25-205ENST00000512853 1937 ntTSL 1 (best)13.58□□□□□ -0.247e-6■□□□□ 11.2
U2AF2P26368 ATP6V1H-203ENST00000396774 1892 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.247e-6■□□□□ 11.2
U2AF2P26368 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.241e-6■□□□□ 11.2
U2AF2P26368 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.245e-9■□□□□ 11.2
U2AF2P26368 SLC47A1-214ENST00000584348 603 ntTSL 312.19□□□□□ -0.464e-12■□□□□ 11.2
U2AF2P26368 DCUN1D2-205ENST00000460318 435 ntTSL 311.2□□□□□ -0.624e-9■□□□□ 11.2
U2AF2P26368 CTNNBL1-202ENST00000373469 1130 ntTSL 1 (best) BASIC10.97□□□□□ -0.654e-9■□□□□ 11.2
U2AF2P26368 ZNF384-216ENST00000545946 500 ntTSL 310.26□□□□□ -0.774e-9■□□□□ 11.2
U2AF2P26368 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.964e-9■□□□□ 11.2
U2AF2P26368 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.17e-6■□□□□ 11.2
U2AF2P26368 PSMC6-206ENST00000554044 844 ntTSL 58.14□□□□□ -1.114e-9■□□□□ 11.2
U2AF2P26368 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.02□□□□□ -1.137e-6■□□□□ 11.2
U2AF2P26368 PSMC6-202ENST00000458604 1093 ntTSL 27.66□□□□□ -1.184e-9■□□□□ 11.2
U2AF2P26368 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.24e-9■□□□□ 11.2
U2AF2P26368 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.214e-9■□□□□ 11.2
U2AF2P26368 NOL11-210ENST00000584032 612 ntTSL 26.94□□□□□ -1.34e-9■□□□□ 11.2
U2AF2P26368 SNX25-203ENST00000504959 1868 ntTSL 26.41□□□□□ -1.387e-6■□□□□ 11.2
U2AF2P26368 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.434e-9■□□□□ 11.2
U2AF2P26368 GTF2I-209ENST00000484840 574 ntTSL 46.07□□□□□ -1.445e-9■□□□□ 11.2
U2AF2P26368 PSMC6-212ENST00000556813 785 ntTSL 56.07□□□□□ -1.444e-9■□□□□ 11.2
U2AF2P26368 PSMC6-214ENST00000557240 625 ntTSL 55.68□□□□□ -1.54e-9■□□□□ 11.2
U2AF2P26368 SRSF4-207ENST00000622143 614 ntTSL 25.38□□□□□ -1.558e-16■□□□□ 11.2
U2AF2P26368 PSMC6-210ENST00000555339 583 ntTSL 55.26□□□□□ -1.574e-9■□□□□ 11.2
U2AF2P26368 SRSF4-203ENST00000477193 206 ntTSL 23.96□□□□□ -1.788e-16■□□□□ 11.2
U2AF2P26368 NOL11-208ENST00000583021 443 ntTSL 23.25□□□□□ -1.894e-9■□□□□ 11.2
U2AF2P26368 GMNN-204ENST00000378059 688 ntTSL 23.16□□□□□ -1.91e-6■□□□□ 11.2
U2AF2P26368 TOPBP1-206ENST00000508524 618 ntTSL 53.09□□□□□ -1.912e-6■□□□□ 11.2
U2AF2P26368 PSMC6-209ENST00000555175 752 ntTSL 32.35□□□□□ -2.034e-9■□□□□ 11.2
U2AF2P26368 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.665e-7■□□□□ 11.2
U2AF2P26368 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.655e-7■□□□□ 11.2
U2AF2P26368 MRNIP-221ENST00000523267 741 ntTSL 318.49■□□□□ 0.555e-7■□□□□ 11.2
U2AF2P26368 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.525e-7■□□□□ 11.2
U2AF2P26368 MRNIP-215ENST00000521299 868 ntTSL 518.29■□□□□ 0.525e-7■□□□□ 11.2
U2AF2P26368 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18■□□□□ 0.475e-7■□□□□ 11.2
U2AF2P26368 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.63■□□□□ 0.415e-7■□□□□ 11.2
U2AF2P26368 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.325e-7■□□□□ 11.2
U2AF2P26368 MRNIP-219ENST00000522663 2879 ntTSL 1 (best)14.6□□□□□ -0.075e-7■□□□□ 11.2
U2AF2P26368 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.345e-7■□□□□ 11.2
U2AF2P26368 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.695e-7■□□□□ 11.2
U2AF2P26368 FAM208B-208ENST00000482419 424 ntTSL 22.15□□□□□ -2.078e-7■□□□□ 11.2
U2AF2P26368 CLDND1-229ENST00000513988 598 ntTSL 28.49□□□□□ -1.051e-6■□□□□ 11.2
U2AF2P26368 SRRT-205ENST00000449389 448 ntTSL 311.96□□□□□ -0.494e-7■□□□□ 11.2
U2AF2P26368 GBA2-206ENST00000486797 772 ntTSL 515.43■□□□□ 0.064e-8■□□□□ 11.2
U2AF2P26368 TNS3-203ENST00000415929 570 ntTSL 413.74□□□□□ -0.211e-6■□□□□ 11.2
U2AF2P26368 TNS3-206ENST00000442536 1166 ntTSL 1 (best) BASIC11.96□□□□□ -0.491e-6■□□□□ 11.2
U2AF2P26368 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.39□□□□□ -1.231e-6■□□□□ 11.2
U2AF2P26368 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.672e-7■□□□□ 11.2
U2AF2P26368 NCAPD2-202ENST00000382457 2844 ntTSL 512.97□□□□□ -0.332e-7■□□□□ 11.2
U2AF2P26368 NCAPD2-207ENST00000539084 4290 ntTSL 211.97□□□□□ -0.492e-7■□□□□ 11.2
U2AF2P26368 NCAPD2-208ENST00000539714 533 ntTSL 37.99□□□□□ -1.133e-11■□□□□ 11.2
U2AF2P26368 NCAPD2-210ENST00000541399 584 ntTSL 57.69□□□□□ -1.183e-11■□□□□ 11.2
U2AF2P26368 SMC4-216ENST00000485645 583 ntTSL 518.92■□□□□ 0.623e-7■□□□□ 11.2
U2AF2P26368 SMC4-226ENST00000497311 708 ntTSL 518.92■□□□□ 0.623e-7■□□□□ 11.2
U2AF2P26368 NCOR1-225ENST00000584872 865 ntTSL 315.62■□□□□ 0.092e-9■□□□□ 11.2
U2AF2P26368 ST3GAL6-213ENST00000480133 360 ntTSL 419.86■□□□□ 0.771e-14■□□□□ 11.2
U2AF2P26368 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.186e-9■□□□□ 11.2
U2AF2P26368 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.9■□□□□ 0.146e-9■□□□□ 11.2
U2AF2P26368 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.126e-9■□□□□ 11.2
U2AF2P26368 VEGFA-211ENST00000476772 1683 ntTSL 1 (best)33.26■■■□□ 2.922e-48■□□□□ 11.2
U2AF2P26368 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.422e-48■□□□□ 11.2
U2AF2P26368 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.32e-48■□□□□ 11.2
U2AF2P26368 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.26■■■□□ 2.272e-48■□□□□ 11.2
U2AF2P26368 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.082e-48■□□□□ 11.2
U2AF2P26368 VEGFA-220ENST00000519767 970 ntTSL 1 (best)28.06■■■□□ 2.082e-48■□□□□ 11.2
U2AF2P26368 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.05■■■□□ 2.082e-48■□□□□ 11.2
U2AF2P26368 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.05■■■□□ 2.082e-48■□□□□ 11.2
U2AF2P26368 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.05■■■□□ 2.082e-48■□□□□ 11.2
U2AF2P26368 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.05■■■□□ 2.082e-48■□□□□ 11.2
U2AF2P26368 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.05■■■□□ 2.082e-48■□□□□ 11.2
U2AF2P26368 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.082e-48■□□□□ 11.2
U2AF2P26368 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.082e-48■□□□□ 11.2
U2AF2P26368 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.082e-48■□□□□ 11.2
U2AF2P26368 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.042e-48■□□□□ 11.2
U2AF2P26368 VEGFA-217ENST00000518538 535 ntTSL 224.84■■□□□ 1.572e-48■□□□□ 11.2
U2AF2P26368 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.87■■□□□ 1.412e-48■□□□□ 11.2
U2AF2P26368 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.15■□□□□ 0.982e-48■□□□□ 11.2
U2AF2P26368 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.61■□□□□ 0.892e-48■□□□□ 11.2
U2AF2P26368 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.782e-48■□□□□ 11.2
U2AF2P26368 VEGFA-221ENST00000520265 336 ntTSL 515.8■□□□□ 0.122e-48■□□□□ 11.2
U2AF2P26368 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)15.75■□□□□ 0.112e-48■□□□□ 11.2
U2AF2P26368 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.54■□□□□ 0.082e-48■□□□□ 11.2
U2AF2P26368 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.94□□□□□ -0.022e-48■□□□□ 11.2
U2AF2P26368 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC14.52□□□□□ -0.092e-48■□□□□ 11.2
U2AF2P26368 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.142e-48■□□□□ 11.2
U2AF2P26368 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC13.79□□□□□ -0.22e-48■□□□□ 11.2
U2AF2P26368 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC13.79□□□□□ -0.22e-48■□□□□ 11.2
U2AF2P26368 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.22e-48■□□□□ 11.2
U2AF2P26368 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)10.41□□□□□ -0.742e-48■□□□□ 11.2
U2AF2P26368 VEGFA-214ENST00000493786 551 ntTSL 28.64□□□□□ -1.032e-48■□□□□ 11.2
Retrieved 100 of 36,523 protein–RNA pairs in 451.6 ms