RNA–Protein interactions for RNA: ENST00000541399.1

NCAPD2-210, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 5

Gene NCAPD2, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-210ENST00000541399 AEBP2Q6ZN18 517 aaPredicted RBP18.98■□□□□ 0.63
NCAPD2-210ENST00000541399 CHIC1Q5VXU3 224 aa18.65■□□□□ 0.58
NCAPD2-210ENST00000541399 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.21
NCAPD2-210ENST00000541399 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
NCAPD2-210ENST00000541399 SENP3Q9H4L4 574 aaPredicted RBP16.12■□□□□ 0.17
NCAPD2-210ENST00000541399 PLPPR3Q6T4P5 718 aa15.17■□□□□ 0.02
NCAPD2-210ENST00000541399 FOXD1Q16676 465 aa14.92□□□□□ -0.02
NCAPD2-210ENST00000541399 PPP6R1Q9UPN7 881 aa14.41□□□□□ -0.1
NCAPD2-210ENST00000541399 ADRA2BP18089 450 aa14.36□□□□□ -0.11
NCAPD2-210ENST00000541399 CCDC180Q9P1Z9 1646 aa14.24□□□□□ -0.13
NCAPD2-210ENST00000541399 PIAS4Q8N2W9 510 aaPredicted RBP14.04□□□□□ -0.16
NCAPD2-210ENST00000541399 ABCC9O60706 1549 aa13.84□□□□□ -0.19
NCAPD2-210ENST00000541399 MSH5O43196 834 aa13.76□□□□□ -0.21
NCAPD2-210ENST00000541399 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
NCAPD2-210ENST00000541399 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
NCAPD2-210ENST00000541399 DCAF1Q9Y4B6 1507 aa13.47□□□□□ -0.25
NCAPD2-210ENST00000541399 NACADO15069 1562 aa13.45□□□□□ -0.26
NCAPD2-210ENST00000541399 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
NCAPD2-210ENST00000541399 RB1CC1Q8TDY2 1594 aa13.38□□□□□ -0.27
NCAPD2-210ENST00000541399 PPP4R3CPQ6ZMV5 832 aa13.35□□□□□ -0.27
NCAPD2-210ENST00000541399 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
NCAPD2-210ENST00000541399 KCNA4P22459 653 aa13.1□□□□□ -0.31
NCAPD2-210ENST00000541399 POTEDQ86YR6 584 aa13.06□□□□□ -0.32
NCAPD2-210ENST00000541399 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
NCAPD2-210ENST00000541399 BICRAQ9NZM4 1560 aa13□□□□□ -0.33
NCAPD2-210ENST00000541399 MAPK8IP2Q13387 824 aaPredicted RBP13□□□□□ -0.33
NCAPD2-210ENST00000541399 PABPN1Q86U42 306 aaKnown RBP eCLIP13□□□□□ -0.33
NCAPD2-210ENST00000541399 CNKSR2Q8WXI2 1034 aa12.99□□□□□ -0.33
NCAPD2-210ENST00000541399 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
NCAPD2-210ENST00000541399 SCRIBQ14160 1630 aa12.95□□□□□ -0.34
NCAPD2-210ENST00000541399 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
NCAPD2-210ENST00000541399 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
NCAPD2-210ENST00000541399 NPM3O75607 178 aaKnown RBP12.83□□□□□ -0.36
NCAPD2-210ENST00000541399 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
NCAPD2-210ENST00000541399 DNAJC5BQ9UF47 199 aa12.73□□□□□ -0.37
NCAPD2-210ENST00000541399 HOXD11P31277 338 aaPredicted RBP12.69□□□□□ -0.38
NCAPD2-210ENST00000541399 EIF4G1Q04637 1599 aaKnown RBP12.63□□□□□ -0.39
NCAPD2-210ENST00000541399 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
NCAPD2-210ENST00000541399 CC2D2AQ9P2K1 1620 aa12.51□□□□□ -0.41
NCAPD2-210ENST00000541399 BAZ1AQ9NRL2 1556 aaPredicted RBP12.51□□□□□ -0.41
NCAPD2-210ENST00000541399 NCAPD3P42695 1498 aa12.49□□□□□ -0.41
NCAPD2-210ENST00000541399 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
NCAPD2-210ENST00000541399 ATAD2BQ9ULI0 1458 aa12.46□□□□□ -0.41
NCAPD2-210ENST00000541399 SMARCA4P51532 1647 aa12.46□□□□□ -0.41
NCAPD2-210ENST00000541399 MROH2BQ7Z745 1585 aa12.45□□□□□ -0.42
NCAPD2-210ENST00000541399 PEG3Q9GZU2 1588 aa12.43□□□□□ -0.42
NCAPD2-210ENST00000541399 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
NCAPD2-210ENST00000541399 SMARCA2P51531 1590 aa12.4□□□□□ -0.42
NCAPD2-210ENST00000541399 HMGXB3Q12766 1538 aa12.35□□□□□ -0.43
NCAPD2-210ENST00000541399 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
NCAPD2-210ENST00000541399 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
NCAPD2-210ENST00000541399 WIZO95785 1651 aa12.22□□□□□ -0.45
NCAPD2-210ENST00000541399 TOP2AP11388 1531 aaKnown RBP12.18□□□□□ -0.46
NCAPD2-210ENST00000541399 DCAF8L1A6NGE4 600 aa12.15□□□□□ -0.46
NCAPD2-210ENST00000541399 SLC4A2P04920 1241 aa12.12□□□□□ -0.47
NCAPD2-210ENST00000541399 CADPSQ9ULU8 1353 aa12.12□□□□□ -0.47
NCAPD2-210ENST00000541399 CCDC88BA6NC98 1476 aa12.08□□□□□ -0.47
NCAPD2-210ENST00000541399 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
NCAPD2-210ENST00000541399 CSRNP3Q8WYN3 585 aa12.08□□□□□ -0.48
NCAPD2-210ENST00000541399 ZBTB22O15209 634 aa12.07□□□□□ -0.48
NCAPD2-210ENST00000541399 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
NCAPD2-210ENST00000541399 CFTRP13569 1480 aa12.06□□□□□ -0.48
NCAPD2-210ENST00000541399 LAMC3Q9Y6N6 1575 aa12.03□□□□□ -0.48
NCAPD2-210ENST00000541399 NESP48681 1621 aa12.02□□□□□ -0.49
NCAPD2-210ENST00000541399 PDS5BQ9NTI5 1447 aa12.01□□□□□ -0.49
NCAPD2-210ENST00000541399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.97□□□□□ -0.493e-6■□□□□ 8.5
NCAPD2-210ENST00000541399 ERCC6Q03468 1493 aa11.9□□□□□ -0.5
NCAPD2-210ENST00000541399 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
NCAPD2-210ENST00000541399 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
NCAPD2-210ENST00000541399 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
NCAPD2-210ENST00000541399 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
NCAPD2-210ENST00000541399 CUX2O14529 1486 aa11.83□□□□□ -0.52
NCAPD2-210ENST00000541399 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
NCAPD2-210ENST00000541399 RNF39Q9H2S5 420 aa11.81□□□□□ -0.52
NCAPD2-210ENST00000541399 WDR62O43379 1518 aa11.79□□□□□ -0.52
NCAPD2-210ENST00000541399 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
NCAPD2-210ENST00000541399 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
NCAPD2-210ENST00000541399 URB2Q14146 1524 aaKnown RBP11.77□□□□□ -0.52
NCAPD2-210ENST00000541399 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
NCAPD2-210ENST00000541399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
NCAPD2-210ENST00000541399 HNRNPUL2Q1KMD3 747 aaKnown RBP11.75□□□□□ -0.53
NCAPD2-210ENST00000541399 ATXN8OSP0DMR3 200 aa11.72□□□□□ -0.53
NCAPD2-210ENST00000541399 TOPBP1Q92547 1522 aa11.71□□□□□ -0.53
NCAPD2-210ENST00000541399 SAMD1Q6SPF0 538 aaPredicted RBP11.71□□□□□ -0.53
NCAPD2-210ENST00000541399 PRDM2Q13029 1718 aa11.71□□□□□ -0.54
NCAPD2-210ENST00000541399 C1QBPQ07021 282 aaKnown RBP11.69□□□□□ -0.54
NCAPD2-210ENST00000541399 DNMBPQ6XZF7 1577 aa11.68□□□□□ -0.54
NCAPD2-210ENST00000541399 CUX1P39880 1505 aa11.66□□□□□ -0.54
NCAPD2-210ENST00000541399 WRNQ14191 1432 aaPredicted RBP eCLIP11.65□□□□□ -0.54
NCAPD2-210ENST00000541399 IFT140Q96RY7 1462 aa11.64□□□□□ -0.55
NCAPD2-210ENST00000541399 POLA1P09884 1462 aaPredicted RBP11.63□□□□□ -0.55
NCAPD2-210ENST00000541399 SOGA1O94964 1423 aa11.61□□□□□ -0.55
NCAPD2-210ENST00000541399 APLP2Q06481 763 aa11.61□□□□□ -0.55
NCAPD2-210ENST00000541399 FGD5Q6ZNL6 1462 aa11.59□□□□□ -0.55
NCAPD2-210ENST00000541399 TOP2BQ02880 1626 aa11.57□□□□□ -0.56
NCAPD2-210ENST00000541399 RAD54L2Q9Y4B4 1467 aa11.57□□□□□ -0.56
NCAPD2-210ENST00000541399 TARBP1Q13395 1621 aaKnown RBP11.55□□□□□ -0.56
NCAPD2-210ENST00000541399 ABCA10Q8WWZ4 1543 aa11.55□□□□□ -0.56
NCAPD2-210ENST00000541399 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
NCAPD2-210ENST00000541399 SYNJ1O43426 1573 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms