RNA–Protein interactions for RNA: ENST00000556813.1

PSMC6-212, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 5

Gene PSMC6, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-212ENST00000556813 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
PSMC6-212ENST00000556813 CHIC1Q5VXU3 224 aa22.5■■□□□ 1.19
PSMC6-212ENST00000556813 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
PSMC6-212ENST00000556813 PHF23Q9BUL5 403 aaPredicted RBP20.03■□□□□ 0.8
PSMC6-212ENST00000556813 FOXD1Q16676 465 aa18.95■□□□□ 0.62
PSMC6-212ENST00000556813 PLPPR3Q6T4P5 718 aa17.91■□□□□ 0.46
PSMC6-212ENST00000556813 MSH5O43196 834 aa17.7■□□□□ 0.42
PSMC6-212ENST00000556813 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
PSMC6-212ENST00000556813 PIAS4Q8N2W9 510 aaPredicted RBP17.66■□□□□ 0.42
PSMC6-212ENST00000556813 ADRA2BP18089 450 aa17.62■□□□□ 0.41
PSMC6-212ENST00000556813 POTEDQ86YR6 584 aa17.48■□□□□ 0.39
PSMC6-212ENST00000556813 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
PSMC6-212ENST00000556813 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
PSMC6-212ENST00000556813 SCAF1Q9H7N4 1312 aaKnown RBP16.02■□□□□ 0.16
PSMC6-212ENST00000556813 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
PSMC6-212ENST00000556813 HOXD11P31277 338 aaPredicted RBP15.45■□□□□ 0.06
PSMC6-212ENST00000556813 DCAF8L1A6NGE4 600 aa15.42■□□□□ 0.06
PSMC6-212ENST00000556813 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
PSMC6-212ENST00000556813 RNF216Q9NWF9 866 aaPredicted RBP15.3■□□□□ 0.04
PSMC6-212ENST00000556813 CACNB1Q02641 598 aaPredicted RBP15.26■□□□□ 0.03
PSMC6-212ENST00000556813 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
PSMC6-212ENST00000556813 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
PSMC6-212ENST00000556813 NPM3O75607 178 aaKnown RBP14.89□□□□□ -0.03
PSMC6-212ENST00000556813 DNAJC5BQ9UF47 199 aa14.89□□□□□ -0.03
PSMC6-212ENST00000556813 C1QBPQ07021 282 aaKnown RBP14.87□□□□□ -0.03
PSMC6-212ENST00000556813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.71□□□□□ -0.05
PSMC6-212ENST00000556813 KCNA4P22459 653 aa14.54□□□□□ -0.08
PSMC6-212ENST00000556813 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
PSMC6-212ENST00000556813 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
PSMC6-212ENST00000556813 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
PSMC6-212ENST00000556813 CAPN15O75808 1086 aa14.19□□□□□ -0.14
PSMC6-212ENST00000556813 DSG3P32926 999 aa14.15□□□□□ -0.14
PSMC6-212ENST00000556813 TRHP20396 242 aaPredicted RBP13.96□□□□□ -0.17
PSMC6-212ENST00000556813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.9□□□□□ -0.18
PSMC6-212ENST00000556813 ABCB7O75027 752 aa13.9□□□□□ -0.18
PSMC6-212ENST00000556813 APLP2Q06481 763 aa13.9□□□□□ -0.18
PSMC6-212ENST00000556813 HNRNPUL2Q1KMD3 747 aaKnown RBP13.9□□□□□ -0.18
PSMC6-212ENST00000556813 ZNF219Q9P2Y4 722 aaPredicted RBP13.88□□□□□ -0.19
PSMC6-212ENST00000556813 SAMD1Q6SPF0 538 aaPredicted RBP13.84□□□□□ -0.19
PSMC6-212ENST00000556813 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
PSMC6-212ENST00000556813 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
PSMC6-212ENST00000556813 POTEHQ6S545 545 aa13.66□□□□□ -0.22
PSMC6-212ENST00000556813 POLA2Q14181 598 aa13.57□□□□□ -0.24
PSMC6-212ENST00000556813 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
PSMC6-212ENST00000556813 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
PSMC6-212ENST00000556813 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
PSMC6-212ENST00000556813 ZBTB22O15209 634 aa13.4□□□□□ -0.26
PSMC6-212ENST00000556813 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
PSMC6-212ENST00000556813 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
PSMC6-212ENST00000556813 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
PSMC6-212ENST00000556813 AKT1S1Q96B36 256 aa13.14□□□□□ -0.31
PSMC6-212ENST00000556813 ATXN8OSP0DMR3 200 aa13.12□□□□□ -0.31
PSMC6-212ENST00000556813 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
PSMC6-212ENST00000556813 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
PSMC6-212ENST00000556813 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
PSMC6-212ENST00000556813 FBLN2P98095 1184 aa12.88□□□□□ -0.35
PSMC6-212ENST00000556813 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
PSMC6-212ENST00000556813 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
PSMC6-212ENST00000556813 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
PSMC6-212ENST00000556813 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
PSMC6-212ENST00000556813 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
PSMC6-212ENST00000556813 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
PSMC6-212ENST00000556813 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
PSMC6-212ENST00000556813 ZNF692Q9BU19 519 aaPredicted RBP12.69□□□□□ -0.38
PSMC6-212ENST00000556813 HAX1O00165 279 aa12.68□□□□□ -0.38
PSMC6-212ENST00000556813 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
PSMC6-212ENST00000556813 CLEC11AQ9Y240 323 aa12.64□□□□□ -0.39
PSMC6-212ENST00000556813 SPDYE1Q8NFV5 336 aaPredicted RBP12.63□□□□□ -0.39
PSMC6-212ENST00000556813 EVX2Q03828 476 aa12.59□□□□□ -0.39
PSMC6-212ENST00000556813 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
PSMC6-212ENST00000556813 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
PSMC6-212ENST00000556813 NISCHQ9Y2I1 1504 aa12.5□□□□□ -0.41
PSMC6-212ENST00000556813 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.41
PSMC6-212ENST00000556813 CHADLQ6NUI6 762 aa12.45□□□□□ -0.42
PSMC6-212ENST00000556813 C19orf67A6NJJ6 358 aa12.41□□□□□ -0.42
PSMC6-212ENST00000556813 PRR29P0C7W0 189 aa12.41□□□□□ -0.42
PSMC6-212ENST00000556813 GABBR2O75899 941 aa12.26□□□□□ -0.45
PSMC6-212ENST00000556813 FARP1Q9Y4F1 1045 aaPredicted RBP12.22□□□□□ -0.45
PSMC6-212ENST00000556813 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
PSMC6-212ENST00000556813 CD44P16070 742 aaKnown RBP12.16□□□□□ -0.46
PSMC6-212ENST00000556813 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
PSMC6-212ENST00000556813 STAG3Q9UJ98 1225 aa12.1□□□□□ -0.47
PSMC6-212ENST00000556813 POTEIP0CG38 1075 aa12.03□□□□□ -0.48
PSMC6-212ENST00000556813 LHX8Q68G74 356 aa11.98□□□□□ -0.49
PSMC6-212ENST00000556813 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
PSMC6-212ENST00000556813 ZNF579Q8NAF0 562 aaKnown RBP11.96□□□□□ -0.49
PSMC6-212ENST00000556813 CLCN6P51797 869 aa11.95□□□□□ -0.5
PSMC6-212ENST00000556813 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
PSMC6-212ENST00000556813 PROM2Q8N271 834 aa11.87□□□□□ -0.51
PSMC6-212ENST00000556813 DCBLD2Q96PD2 775 aa11.87□□□□□ -0.51
PSMC6-212ENST00000556813 GALR2O43603 387 aaPredicted RBP11.86□□□□□ -0.51
PSMC6-212ENST00000556813 PHF12Q96QT6 1004 aa11.84□□□□□ -0.51
PSMC6-212ENST00000556813 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
PSMC6-212ENST00000556813 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
PSMC6-212ENST00000556813 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
PSMC6-212ENST00000556813 TSPYL2Q9H2G4 693 aaPredicted RBP11.67□□□□□ -0.54
PSMC6-212ENST00000556813 MS4A3Q96HJ5 214 aa11.66□□□□□ -0.54
PSMC6-212ENST00000556813 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
PSMC6-212ENST00000556813 MIER1Q8N108 512 aa11.62□□□□□ -0.55
PSMC6-212ENST00000556813 CCDC61Q9Y6R9 512 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms