RNA–Protein interactions for RNA: ENST00000573035.5

GTF2I-212, Transcript of general transcription factor IIi, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene GTF2I, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-212ENST00000573035 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
GTF2I-212ENST00000573035 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
GTF2I-212ENST00000573035 SUPT5HO00267 1087 aaKnown RBP24.07■■□□□ 1.44
GTF2I-212ENST00000573035 SHROOM4Q9ULL8 1493 aa23.98■■□□□ 1.43
GTF2I-212ENST00000573035 PELP1Q8IZL8 1130 aaKnown RBP23.51■■□□□ 1.35
GTF2I-212ENST00000573035 EHMT2Q96KQ7 1210 aa23.35■■□□□ 1.33
GTF2I-212ENST00000573035 MYT1Q01538 1121 aa23.23■■□□□ 1.31
GTF2I-212ENST00000573035 PCGF6Q9BYE7 350 aa22.87■■□□□ 1.25
GTF2I-212ENST00000573035 FAM9AQ8IZU1 332 aaPredicted RBP22.73■■□□□ 1.23
GTF2I-212ENST00000573035 ZEB1P37275 1124 aaPredicted RBP22.72■■□□□ 1.23
GTF2I-212ENST00000573035 CENPBP07199 599 aaPredicted RBP22.7■■□□□ 1.22
GTF2I-212ENST00000573035 HRCP23327 699 aa22.49■■□□□ 1.19
GTF2I-212ENST00000573035 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
GTF2I-212ENST00000573035 TTBK1Q5TCY1 1321 aaPredicted RBP22.37■■□□□ 1.17
GTF2I-212ENST00000573035 APLP2Q06481 763 aa22.29■■□□□ 1.16
GTF2I-212ENST00000573035 TRIM41Q8WV44 630 aa22.17■■□□□ 1.14
GTF2I-212ENST00000573035 ABCC9O60706 1549 aa22.11■■□□□ 1.13
GTF2I-212ENST00000573035 ATP1B4Q9UN42 357 aaPredicted RBP22.07■■□□□ 1.12
GTF2I-212ENST00000573035 ERICH6Q7L0X2 663 aa22.07■■□□□ 1.12
GTF2I-212ENST00000573035 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
GTF2I-212ENST00000573035 PABPN1Q86U42 306 aaKnown RBP eCLIP21.98■■□□□ 1.11
GTF2I-212ENST00000573035 TRIM26Q12899 539 aaPredicted RBP21.97■■□□□ 1.11
GTF2I-212ENST00000573035 UBTFP17480 764 aaKnown RBP21.92■■□□□ 1.1
GTF2I-212ENST00000573035 YTHDC1Q96MU7 727 aaKnown RBP21.74■■□□□ 1.07
GTF2I-212ENST00000573035 PPARGC1BQ86YN6 1023 aaKnown RBP21.74■■□□□ 1.07
GTF2I-212ENST00000573035 NEFLP07196 543 aa21.7■■□□□ 1.06
GTF2I-212ENST00000573035 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
GTF2I-212ENST00000573035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
GTF2I-212ENST00000573035 HNRNPUL2Q1KMD3 747 aaKnown RBP21.43■■□□□ 1.02
GTF2I-212ENST00000573035 DIEXFQ68CQ4 756 aaKnown RBP21.33■■□□□ 1.01
GTF2I-212ENST00000573035 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
GTF2I-212ENST00000573035 GTF3C3Q9Y5Q9 886 aa21.31■■□□□ 1
GTF2I-212ENST00000573035 MYT1LQ9UL68 1186 aa21.26■□□□□ 0.99
GTF2I-212ENST00000573035 ITGAEP38570 1179 aa21.24■□□□□ 0.99
GTF2I-212ENST00000573035 ACIN1Q9UKV3 1341 aaKnown RBP21.18■□□□□ 0.98
GTF2I-212ENST00000573035 FBLN2P98095 1184 aa21.07■□□□□ 0.96
GTF2I-212ENST00000573035 RTL5Q5HYW3 569 aaPredicted RBP20.9■□□□□ 0.94
GTF2I-212ENST00000573035 DAXXQ9UER7 740 aaPredicted RBP20.83■□□□□ 0.93
GTF2I-212ENST00000573035 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
GTF2I-212ENST00000573035 SCAF1Q9H7N4 1312 aaKnown RBP20.81■□□□□ 0.92
GTF2I-212ENST00000573035 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
GTF2I-212ENST00000573035 ZNF316A6NFI3 1004 aaPredicted RBP20.77■□□□□ 0.92
GTF2I-212ENST00000573035 ARID3CA6NKF2 412 aa20.74■□□□□ 0.91
GTF2I-212ENST00000573035 POLR3GLQ9BT43 218 aa20.74■□□□□ 0.91
GTF2I-212ENST00000573035 P3H3Q8IVL6 736 aa20.7■□□□□ 0.9
GTF2I-212ENST00000573035 CNGB1Q14028 1251 aaPredicted RBP20.68■□□□□ 0.9
GTF2I-212ENST00000573035 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
GTF2I-212ENST00000573035 FAM50AQ14320 339 aaKnown RBP20.65■□□□□ 0.9
GTF2I-212ENST00000573035 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
GTF2I-212ENST00000573035 CDK11AQ9UQ88 783 aaPredicted RBP20.6■□□□□ 0.89
GTF2I-212ENST00000573035 BCANQ96GW7 911 aa20.59■□□□□ 0.89
GTF2I-212ENST00000573035 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
GTF2I-212ENST00000573035 CSRNP3Q8WYN3 585 aa20.45■□□□□ 0.86
GTF2I-212ENST00000573035 TRIM52Q96A61 297 aa20.45■□□□□ 0.86
GTF2I-212ENST00000573035 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
GTF2I-212ENST00000573035 ANP32CO43423 234 aa20.35■□□□□ 0.85
GTF2I-212ENST00000573035 CCDC180Q9P1Z9 1646 aa20.32■□□□□ 0.84
GTF2I-212ENST00000573035 ZNF777Q9ULD5 760 aaPredicted RBP20.32■□□□□ 0.84
GTF2I-212ENST00000573035 ZNF326Q5BKZ1 582 aaKnown RBP20.26■□□□□ 0.83
GTF2I-212ENST00000573035 ANP32EQ9BTT0 268 aa20.26■□□□□ 0.83
GTF2I-212ENST00000573035 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
GTF2I-212ENST00000573035 ANP32AP39687 249 aaKnown RBP20.24■□□□□ 0.83
GTF2I-212ENST00000573035 FKBP8Q14318 412 aa20.22■□□□□ 0.83
GTF2I-212ENST00000573035 PLPPR3Q6T4P5 718 aa20.18■□□□□ 0.82
GTF2I-212ENST00000573035 CHMP7Q8WUX9 453 aaPredicted RBP20.12■□□□□ 0.81
GTF2I-212ENST00000573035 EIF5BO60841 1220 aaKnown RBP20.11■□□□□ 0.81
GTF2I-212ENST00000573035 NPM1P06748 294 aaKnown RBP eCLIP20.11■□□□□ 0.81
GTF2I-212ENST00000573035 GLIPR1L2Q4G1C9 344 aa20.08■□□□□ 0.8
GTF2I-212ENST00000573035 MIER1Q8N108 512 aa20.06■□□□□ 0.8
GTF2I-212ENST00000573035 BCL11AQ9H165 835 aa20■□□□□ 0.79
GTF2I-212ENST00000573035 NACADO15069 1562 aa19.98■□□□□ 0.79
GTF2I-212ENST00000573035 RSF1Q96T23 1441 aaPredicted RBP19.98■□□□□ 0.79
GTF2I-212ENST00000573035 ESF1Q9H501 851 aaKnown RBP19.94■□□□□ 0.78
GTF2I-212ENST00000573035 MYO15BQ96JP2 1530 aa19.94■□□□□ 0.78
GTF2I-212ENST00000573035 CHIC2Q9UKJ5 165 aa19.91■□□□□ 0.78
GTF2I-212ENST00000573035 CHGAP10645 457 aaKnown RBP19.9■□□□□ 0.78
GTF2I-212ENST00000573035 BAZ1BQ9UIG0 1483 aaKnown RBP19.9■□□□□ 0.78
GTF2I-212ENST00000573035 ZBTB47Q9UFB7 747 aaPredicted RBP19.89■□□□□ 0.77
GTF2I-212ENST00000573035 KCNH8Q96L42 1107 aa19.87■□□□□ 0.77
GTF2I-212ENST00000573035 CECR2Q9BXF3 1484 aa19.87■□□□□ 0.77
GTF2I-212ENST00000573035 NBR1Q14596 966 aa19.86■□□□□ 0.77
GTF2I-212ENST00000573035 NPM2Q86SE8 214 aaKnown RBP19.83■□□□□ 0.77
GTF2I-212ENST00000573035 HNRNPUQ00839 825 aaKnown RBP eCLIP19.83■□□□□ 0.77
GTF2I-212ENST00000573035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.83■□□□□ 0.772e-7■■■□□ 15.9
GTF2I-212ENST00000573035 ERCC6Q03468 1493 aa19.79■□□□□ 0.76
GTF2I-212ENST00000573035 STAG3Q9UJ98 1225 aa19.79■□□□□ 0.76
GTF2I-212ENST00000573035 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
GTF2I-212ENST00000573035 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
GTF2I-212ENST00000573035 SUPT16HQ9Y5B9 1047 aaKnown RBP19.74■□□□□ 0.75
GTF2I-212ENST00000573035 CCDC136Q96JN2 1154 aa19.7■□□□□ 0.74
GTF2I-212ENST00000573035 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
GTF2I-212ENST00000573035 WRNQ14191 1432 aaPredicted RBP eCLIP19.69■□□□□ 0.74
GTF2I-212ENST00000573035 TSPY4P0CV99 314 aa19.69■□□□□ 0.74
GTF2I-212ENST00000573035 TSPY10P0CW01 314 aa19.69■□□□□ 0.74
GTF2I-212ENST00000573035 SLC24A1O60721 1099 aa19.68■□□□□ 0.74
GTF2I-212ENST00000573035 ANP32BQ92688 251 aaKnown RBP19.61■□□□□ 0.73
GTF2I-212ENST00000573035 PLEKHD1A6NEE1 506 aa19.6■□□□□ 0.73
GTF2I-212ENST00000573035 CLIP1P30622 1438 aa19.6■□□□□ 0.73
GTF2I-212ENST00000573035 TONSLQ96HA7 1378 aa19.6■□□□□ 0.73
GTF2I-212ENST00000573035 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms