RNA–Protein interactions for RNA: ENST00000442536.6

TNS3-206, Transcript of tensin 3, humanhuman

TSL 1 (best) BASIC

Gene TNS3, Length 1,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-206ENST00000442536 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
TNS3-206ENST00000442536 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
TNS3-206ENST00000442536 ABCC9O60706 1549 aa22.42■■□□□ 1.18
TNS3-206ENST00000442536 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
TNS3-206ENST00000442536 NACADO15069 1562 aa21.55■■□□□ 1.04
TNS3-206ENST00000442536 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
TNS3-206ENST00000442536 ZCCHC6Q5VYS8 1495 aaKnown RBP21.48■■□□□ 1.03
TNS3-206ENST00000442536 MYO15BQ96JP2 1530 aa21.4■■□□□ 1.02
TNS3-206ENST00000442536 DCAF1Q9Y4B6 1507 aa21.33■■□□□ 1
TNS3-206ENST00000442536 UNC13AQ9UPW8 1703 aa21.16■□□□□ 0.98
TNS3-206ENST00000442536 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
TNS3-206ENST00000442536 PABPN1Q86U42 306 aaKnown RBP eCLIP20.94■□□□□ 0.94
TNS3-206ENST00000442536 BICRAQ9NZM4 1560 aa20.93■□□□□ 0.94
TNS3-206ENST00000442536 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
TNS3-206ENST00000442536 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
TNS3-206ENST00000442536 EIF4G1Q04637 1599 aaKnown RBP20.37■□□□□ 0.85
TNS3-206ENST00000442536 CC2D2AQ9P2K1 1620 aa20.3■□□□□ 0.84
TNS3-206ENST00000442536 CECR2Q9BXF3 1484 aa20.13■□□□□ 0.81
TNS3-206ENST00000442536 SMARCA4P51532 1647 aa20.03■□□□□ 0.8
TNS3-206ENST00000442536 BAZ1AQ9NRL2 1556 aaPredicted RBP19.99■□□□□ 0.79
TNS3-206ENST00000442536 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
TNS3-206ENST00000442536 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.77
TNS3-206ENST00000442536 SMARCA2P51531 1590 aa19.88■□□□□ 0.77
TNS3-206ENST00000442536 NCAPD3P42695 1498 aa19.86■□□□□ 0.77
TNS3-206ENST00000442536 PEG3Q9GZU2 1588 aa19.81■□□□□ 0.76
TNS3-206ENST00000442536 HMGXB3Q12766 1538 aa19.79■□□□□ 0.76
TNS3-206ENST00000442536 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
TNS3-206ENST00000442536 WIZO95785 1651 aa19.69■□□□□ 0.74
TNS3-206ENST00000442536 RSF1Q96T23 1441 aaPredicted RBP19.64■□□□□ 0.73
TNS3-206ENST00000442536 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
TNS3-206ENST00000442536 NESP48681 1621 aa19.41■□□□□ 0.7
TNS3-206ENST00000442536 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
TNS3-206ENST00000442536 ERCC6Q03468 1493 aa19.32■□□□□ 0.68
TNS3-206ENST00000442536 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
TNS3-206ENST00000442536 KIF21AQ7Z4S6 1674 aa19.23■□□□□ 0.67
TNS3-206ENST00000442536 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
TNS3-206ENST00000442536 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
TNS3-206ENST00000442536 CFTRP13569 1480 aa19.18■□□□□ 0.66
TNS3-206ENST00000442536 SUPT5HO00267 1087 aaKnown RBP19.17■□□□□ 0.66
TNS3-206ENST00000442536 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
TNS3-206ENST00000442536 THOC2Q8NI27 1593 aaKnown RBP19.12■□□□□ 0.65
TNS3-206ENST00000442536 CUX2O14529 1486 aa19.09■□□□□ 0.65
TNS3-206ENST00000442536 FANCD2Q9BXW9 1451 aa19.08■□□□□ 0.64
TNS3-206ENST00000442536 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
TNS3-206ENST00000442536 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
TNS3-206ENST00000442536 WDR62O43379 1518 aa18.97■□□□□ 0.63
TNS3-206ENST00000442536 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
TNS3-206ENST00000442536 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
TNS3-206ENST00000442536 DNMBPQ6XZF7 1577 aa18.78■□□□□ 0.6
TNS3-206ENST00000442536 ABCC8Q09428 1581 aa18.76■□□□□ 0.59
TNS3-206ENST00000442536 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
TNS3-206ENST00000442536 CUX1P39880 1505 aa18.65■□□□□ 0.58
TNS3-206ENST00000442536 POLA1P09884 1462 aaPredicted RBP18.62■□□□□ 0.57
TNS3-206ENST00000442536 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
TNS3-206ENST00000442536 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.57
TNS3-206ENST00000442536 ZNF608Q9ULD9 1512 aaPredicted RBP18.58■□□□□ 0.56
TNS3-206ENST00000442536 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
TNS3-206ENST00000442536 SOGA1O94964 1423 aa18.54■□□□□ 0.56
TNS3-206ENST00000442536 EIF4G3O43432 1585 aaKnown RBP18.52■□□□□ 0.56
TNS3-206ENST00000442536 WRNQ14191 1432 aaPredicted RBP eCLIP18.52■□□□□ 0.56
TNS3-206ENST00000442536 BIVM-ERCC5R4GMW8 1640 aa18.52■□□□□ 0.55
TNS3-206ENST00000442536 SYNJ1O43426 1573 aa18.51■□□□□ 0.55
TNS3-206ENST00000442536 TOP2BQ02880 1626 aa18.5■□□□□ 0.55
TNS3-206ENST00000442536 DNAJC5Q9H3Z4 198 aa18.48■□□□□ 0.55
TNS3-206ENST00000442536 AQRO60306 1485 aaKnown RBP eCLIP18.47■□□□□ 0.551e-6■■□□□ 12
TNS3-206ENST00000442536 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
TNS3-206ENST00000442536 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
TNS3-206ENST00000442536 ABCA10Q8WWZ4 1543 aa18.4■□□□□ 0.54
TNS3-206ENST00000442536 PBRM1Q86U86 1689 aa18.34■□□□□ 0.53
TNS3-206ENST00000442536 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
TNS3-206ENST00000442536 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.53
TNS3-206ENST00000442536 GRIN2BQ13224 1484 aa18.33■□□□□ 0.52
TNS3-206ENST00000442536 CHD1O14646 1710 aa18.32■□□□□ 0.52
TNS3-206ENST00000442536 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
TNS3-206ENST00000442536 OSCARQ8IYS5 282 aa18.3■□□□□ 0.52
TNS3-206ENST00000442536 MAGI1Q96QZ7 1491 aaPredicted RBP18.27■□□□□ 0.52
TNS3-206ENST00000442536 FBLN2P98095 1184 aa18.24■□□□□ 0.51
TNS3-206ENST00000442536 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
TNS3-206ENST00000442536 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
TNS3-206ENST00000442536 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
TNS3-206ENST00000442536 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
TNS3-206ENST00000442536 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
TNS3-206ENST00000442536 FHAD1B1AJZ9 1412 aa18.11■□□□□ 0.49
TNS3-206ENST00000442536 GRIN2AQ12879 1464 aa18.09■□□□□ 0.49
TNS3-206ENST00000442536 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
TNS3-206ENST00000442536 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.48
TNS3-206ENST00000442536 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
TNS3-206ENST00000442536 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
TNS3-206ENST00000442536 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
TNS3-206ENST00000442536 IGF1RP08069 1367 aa18.04■□□□□ 0.48
TNS3-206ENST00000442536 CUL7Q14999 1698 aa18.04■□□□□ 0.48
TNS3-206ENST00000442536 ARHGEF11O15085 1522 aa18.03■□□□□ 0.48
TNS3-206ENST00000442536 CEP170Q5SW79 1584 aa18.01■□□□□ 0.47
TNS3-206ENST00000442536 NUP160Q12769 1436 aa18■□□□□ 0.47
TNS3-206ENST00000442536 RUSC2Q8N2Y8 1516 aa17.99■□□□□ 0.47
TNS3-206ENST00000442536 CARMIL1Q5VZK9 1371 aa17.95■□□□□ 0.46
TNS3-206ENST00000442536 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
TNS3-206ENST00000442536 SHROOM2Q13796 1616 aa17.89■□□□□ 0.45
TNS3-206ENST00000442536 ARAP1Q96P48 1450 aa17.88■□□□□ 0.45
TNS3-206ENST00000442536 RAPGEF2Q9Y4G8 1499 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms