RNA–Protein interactions for RNA: ENST00000621734.4

GTF2I-221, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF2I, Length 4,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-221ENST00000621734 NISCHQ9Y2I1 1504 aa25.81■■□□□ 1.72
GTF2I-221ENST00000621734 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
GTF2I-221ENST00000621734 SUPT5HO00267 1087 aaKnown RBP24.04■■□□□ 1.44
GTF2I-221ENST00000621734 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
GTF2I-221ENST00000621734 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
GTF2I-221ENST00000621734 FAM9AQ8IZU1 332 aaPredicted RBP22.6■■□□□ 1.21
GTF2I-221ENST00000621734 ABCC9O60706 1549 aa22.49■■□□□ 1.19
GTF2I-221ENST00000621734 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
GTF2I-221ENST00000621734 APLP2Q06481 763 aa22.19■■□□□ 1.14
GTF2I-221ENST00000621734 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
GTF2I-221ENST00000621734 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
GTF2I-221ENST00000621734 TTBK1Q5TCY1 1321 aaPredicted RBP22.05■■□□□ 1.12
GTF2I-221ENST00000621734 UBTFP17480 764 aaKnown RBP21.92■■□□□ 1.1
GTF2I-221ENST00000621734 ATP1B4Q9UN42 357 aaPredicted RBP21.86■■□□□ 1.09
GTF2I-221ENST00000621734 PCGF6Q9BYE7 350 aa21.64■■□□□ 1.06
GTF2I-221ENST00000621734 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
GTF2I-221ENST00000621734 PPARGC1BQ86YN6 1023 aaKnown RBP21.45■■□□□ 1.02
GTF2I-221ENST00000621734 LOC105371045A0A1W2PR82 267 aa21.41■■□□□ 1.02
GTF2I-221ENST00000621734 ZCCHC6Q5VYS8 1495 aaKnown RBP21.33■■□□□ 1.01
GTF2I-221ENST00000621734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.27■■□□□ 1
GTF2I-221ENST00000621734 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■■□□□ 1
GTF2I-221ENST00000621734 CCDC180Q9P1Z9 1646 aa21.26■□□□□ 0.99
GTF2I-221ENST00000621734 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
GTF2I-221ENST00000621734 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.98
GTF2I-221ENST00000621734 ITGAEP38570 1179 aa21.07■□□□□ 0.96
GTF2I-221ENST00000621734 FBLN2P98095 1184 aa21.01■□□□□ 0.95
GTF2I-221ENST00000621734 MYT1LQ9UL68 1186 aa20.99■□□□□ 0.95
GTF2I-221ENST00000621734 RB1CC1Q8TDY2 1594 aa20.9■□□□□ 0.94
GTF2I-221ENST00000621734 TRIM26Q12899 539 aaPredicted RBP20.88■□□□□ 0.93
GTF2I-221ENST00000621734 ZEB1P37275 1124 aaPredicted RBP20.84■□□□□ 0.93
GTF2I-221ENST00000621734 NACADO15069 1562 aa20.75■□□□□ 0.91
GTF2I-221ENST00000621734 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
GTF2I-221ENST00000621734 P3H3Q8IVL6 736 aa20.69■□□□□ 0.9
GTF2I-221ENST00000621734 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
GTF2I-221ENST00000621734 ARID3CA6NKF2 412 aa20.6■□□□□ 0.89
GTF2I-221ENST00000621734 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
GTF2I-221ENST00000621734 POLR3GLQ9BT43 218 aa20.41■□□□□ 0.86
GTF2I-221ENST00000621734 DCAF1Q9Y4B6 1507 aa20.41■□□□□ 0.86
GTF2I-221ENST00000621734 CECR2Q9BXF3 1484 aa20.4■□□□□ 0.86
GTF2I-221ENST00000621734 TRIM52Q96A61 297 aa20.37■□□□□ 0.85
GTF2I-221ENST00000621734 BAZ1BQ9UIG0 1483 aaKnown RBP20.36■□□□□ 0.85
GTF2I-221ENST00000621734 PELP1Q8IZL8 1130 aaKnown RBP20.34■□□□□ 0.85
GTF2I-221ENST00000621734 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
GTF2I-221ENST00000621734 CNGB1Q14028 1251 aaPredicted RBP20.27■□□□□ 0.84
GTF2I-221ENST00000621734 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
GTF2I-221ENST00000621734 CENPBP07199 599 aaPredicted RBP20.26■□□□□ 0.83
GTF2I-221ENST00000621734 HRCP23327 699 aa20.25■□□□□ 0.83
GTF2I-221ENST00000621734 ZNF777Q9ULD5 760 aaPredicted RBP20.25■□□□□ 0.83
GTF2I-221ENST00000621734 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
GTF2I-221ENST00000621734 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
GTF2I-221ENST00000621734 NEUROD1Q13562 356 aa20.2■□□□□ 0.82
GTF2I-221ENST00000621734 NPM1P06748 294 aaKnown RBP eCLIP20.15■□□□□ 0.82
GTF2I-221ENST00000621734 WRNQ14191 1432 aaPredicted RBP eCLIP20.11■□□□□ 0.81
GTF2I-221ENST00000621734 SLC4A1APQ9BWU0 796 aaKnown RBP20.08■□□□□ 0.8
GTF2I-221ENST00000621734 ZNF326Q5BKZ1 582 aaKnown RBP20.07■□□□□ 0.8
GTF2I-221ENST00000621734 MROH2BQ7Z745 1585 aa20.04■□□□□ 0.8
GTF2I-221ENST00000621734 ERCC6Q03468 1493 aa20.03■□□□□ 0.8
GTF2I-221ENST00000621734 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
GTF2I-221ENST00000621734 NEFLP07196 543 aa19.92■□□□□ 0.78
GTF2I-221ENST00000621734 KIF27Q86VH2 1401 aa19.91■□□□□ 0.78
GTF2I-221ENST00000621734 CHIC2Q9UKJ5 165 aa19.9■□□□□ 0.78
GTF2I-221ENST00000621734 CLIP1P30622 1438 aa19.9■□□□□ 0.78
GTF2I-221ENST00000621734 KCNH8Q96L42 1107 aa19.87■□□□□ 0.77
GTF2I-221ENST00000621734 MTUS2Q5JR59 1369 aa19.86■□□□□ 0.77
GTF2I-221ENST00000621734 EEA1Q15075 1411 aa19.85■□□□□ 0.77
GTF2I-221ENST00000621734 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
GTF2I-221ENST00000621734 ESF1Q9H501 851 aaKnown RBP19.84■□□□□ 0.77
GTF2I-221ENST00000621734 BCANQ96GW7 911 aa19.83■□□□□ 0.76
GTF2I-221ENST00000621734 PLPPR3Q6T4P5 718 aa19.82■□□□□ 0.76
GTF2I-221ENST00000621734 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
GTF2I-221ENST00000621734 TSPY4P0CV99 314 aa19.79■□□□□ 0.76
GTF2I-221ENST00000621734 TSPY10P0CW01 314 aa19.79■□□□□ 0.76
GTF2I-221ENST00000621734 DIEXFQ68CQ4 756 aaKnown RBP19.79■□□□□ 0.76
GTF2I-221ENST00000621734 PLEKHD1A6NEE1 506 aa19.77■□□□□ 0.76
GTF2I-221ENST00000621734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.752e-7■■■□□ 15.9
GTF2I-221ENST00000621734 GOLGA3Q08378 1498 aa19.75■□□□□ 0.75
GTF2I-221ENST00000621734 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
GTF2I-221ENST00000621734 PDS5BQ9NTI5 1447 aa19.74■□□□□ 0.75
GTF2I-221ENST00000621734 CUX2O14529 1486 aa19.73■□□□□ 0.75
GTF2I-221ENST00000621734 CEP162Q5TB80 1403 aa19.71■□□□□ 0.75
GTF2I-221ENST00000621734 SOGA1O94964 1423 aa19.71■□□□□ 0.75
GTF2I-221ENST00000621734 ATAD2BQ9ULI0 1458 aa19.71■□□□□ 0.75
GTF2I-221ENST00000621734 TDRD9Q8NDG6 1382 aaKnown RBP19.7■□□□□ 0.74
GTF2I-221ENST00000621734 CARMIL1Q5VZK9 1371 aa19.69■□□□□ 0.74
GTF2I-221ENST00000621734 CADPSQ9ULU8 1353 aa19.69■□□□□ 0.74
GTF2I-221ENST00000621734 STAG3Q9UJ98 1225 aa19.67■□□□□ 0.74
GTF2I-221ENST00000621734 WIZO95785 1651 aa19.66■□□□□ 0.74
GTF2I-221ENST00000621734 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
GTF2I-221ENST00000621734 TNIKQ9UKE5 1360 aa19.63■□□□□ 0.73
GTF2I-221ENST00000621734 RRP7BPQ9NSQ0 103 aa19.62■□□□□ 0.73
GTF2I-221ENST00000621734 ABCC8Q09428 1581 aa19.6■□□□□ 0.73
GTF2I-221ENST00000621734 CFDP1Q9UEE9 299 aaPredicted RBP19.58■□□□□ 0.72
GTF2I-221ENST00000621734 TONSLQ96HA7 1378 aa19.55■□□□□ 0.72
GTF2I-221ENST00000621734 ZNF316A6NFI3 1004 aaPredicted RBP19.54■□□□□ 0.72
GTF2I-221ENST00000621734 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
GTF2I-221ENST00000621734 ANP32CO43423 234 aa19.53■□□□□ 0.72
GTF2I-221ENST00000621734 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
GTF2I-221ENST00000621734 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
GTF2I-221ENST00000621734 EIF4G1Q04637 1599 aaKnown RBP19.47■□□□□ 0.71
GTF2I-221ENST00000621734 ERICH6Q7L0X2 663 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms