RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 NISCHQ9Y2I1 1504 aa34.31■■■■□ 3.08
VAMP2-202ENST00000404970 CCDC180Q9P1Z9 1646 aa30.5■■■□□ 2.47
VAMP2-202ENST00000404970 ABCC9O60706 1549 aa29.72■■■□□ 2.35
VAMP2-202ENST00000404970 ZCCHC6Q5VYS8 1495 aaKnown RBP28.63■■■□□ 2.17
VAMP2-202ENST00000404970 RB1CC1Q8TDY2 1594 aa28.59■■■□□ 2.17
VAMP2-202ENST00000404970 NACADO15069 1562 aa28.57■■■□□ 2.16
VAMP2-202ENST00000404970 DCAF8L2P0C7V8 631 aa28.46■■■□□ 2.15
VAMP2-202ENST00000404970 MYO15BQ96JP2 1530 aa28.42■■■□□ 2.14
VAMP2-202ENST00000404970 DCAF1Q9Y4B6 1507 aa28.36■■■□□ 2.13
VAMP2-202ENST00000404970 UNC13AQ9UPW8 1703 aa28.16■■■□□ 2.1
VAMP2-202ENST00000404970 BICRAQ9NZM4 1560 aa27.86■■■□□ 2.05
VAMP2-202ENST00000404970 SCRIBQ14160 1630 aa27.86■■■□□ 2.05
VAMP2-202ENST00000404970 PABPN1Q86U42 306 aaKnown RBP eCLIP27.75■■■□□ 2.03
VAMP2-202ENST00000404970 SHROOM4Q9ULL8 1493 aa27.41■■□□□ 1.98
VAMP2-202ENST00000404970 DNAJC5BQ9UF47 199 aa27.24■■□□□ 1.95
VAMP2-202ENST00000404970 EIF4G1Q04637 1599 aaKnown RBP27.05■■□□□ 1.92
VAMP2-202ENST00000404970 CC2D2AQ9P2K1 1620 aa26.93■■□□□ 1.9
VAMP2-202ENST00000404970 CECR2Q9BXF3 1484 aa26.77■■□□□ 1.88
VAMP2-202ENST00000404970 SMARCA4P51532 1647 aa26.65■■□□□ 1.86
VAMP2-202ENST00000404970 BAZ1AQ9NRL2 1556 aaPredicted RBP26.55■■□□□ 1.84
VAMP2-202ENST00000404970 MROH2BQ7Z745 1585 aa26.49■■□□□ 1.83
VAMP2-202ENST00000404970 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
VAMP2-202ENST00000404970 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
VAMP2-202ENST00000404970 SMARCA2P51531 1590 aa26.36■■□□□ 1.81
VAMP2-202ENST00000404970 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
VAMP2-202ENST00000404970 HMGXB3Q12766 1538 aa26.28■■□□□ 1.8
VAMP2-202ENST00000404970 WIZO95785 1651 aa26.24■■□□□ 1.79
VAMP2-202ENST00000404970 BAZ1BQ9UIG0 1483 aaKnown RBP26.18■■□□□ 1.78
VAMP2-202ENST00000404970 RSF1Q96T23 1441 aaPredicted RBP26.16■■□□□ 1.78
VAMP2-202ENST00000404970 TOP2AP11388 1531 aaKnown RBP25.9■■□□□ 1.74
VAMP2-202ENST00000404970 NESP48681 1621 aa25.81■■□□□ 1.72
VAMP2-202ENST00000404970 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
VAMP2-202ENST00000404970 CCDC88BA6NC98 1476 aa25.58■■□□□ 1.69
VAMP2-202ENST00000404970 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
VAMP2-202ENST00000404970 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
VAMP2-202ENST00000404970 ERCC6Q03468 1493 aa25.53■■□□□ 1.68
VAMP2-202ENST00000404970 CFTRP13569 1480 aa25.48■■□□□ 1.67
VAMP2-202ENST00000404970 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
VAMP2-202ENST00000404970 THOC2Q8NI27 1593 aaKnown RBP25.43■■□□□ 1.66
VAMP2-202ENST00000404970 PRDM2Q13029 1718 aa25.42■■□□□ 1.66
VAMP2-202ENST00000404970 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
VAMP2-202ENST00000404970 FANCD2Q9BXW9 1451 aa25.32■■□□□ 1.64
VAMP2-202ENST00000404970 CEP164Q9UPV0 1460 aa25.26■■□□□ 1.63
VAMP2-202ENST00000404970 CUX2O14529 1486 aa25.26■■□□□ 1.63
VAMP2-202ENST00000404970 MRC2Q9UBG0 1479 aa25.23■■□□□ 1.63
VAMP2-202ENST00000404970 DNAJC5Q9H3Z4 198 aa25.19■■□□□ 1.62
VAMP2-202ENST00000404970 WDR62O43379 1518 aa25.19■■□□□ 1.62
VAMP2-202ENST00000404970 URB2Q14146 1524 aaKnown RBP25.14■■□□□ 1.61
VAMP2-202ENST00000404970 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
VAMP2-202ENST00000404970 DNMBPQ6XZF7 1577 aa24.94■■□□□ 1.58
VAMP2-202ENST00000404970 CUX1P39880 1505 aa24.85■■□□□ 1.57
VAMP2-202ENST00000404970 ABCC8Q09428 1581 aa24.83■■□□□ 1.57
VAMP2-202ENST00000404970 POLA1P09884 1462 aaPredicted RBP24.75■■□□□ 1.55
VAMP2-202ENST00000404970 TARBP1Q13395 1621 aaKnown RBP24.74■■□□□ 1.55
VAMP2-202ENST00000404970 IFT140Q96RY7 1462 aa24.72■■□□□ 1.55
VAMP2-202ENST00000404970 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
VAMP2-202ENST00000404970 ZNF608Q9ULD9 1512 aaPredicted RBP24.69■■□□□ 1.54
VAMP2-202ENST00000404970 SYNJ1O43426 1573 aa24.69■■□□□ 1.54
VAMP2-202ENST00000404970 BIVM-ERCC5R4GMW8 1640 aa24.67■■□□□ 1.54
VAMP2-202ENST00000404970 RAD54L2Q9Y4B4 1467 aa24.66■■□□□ 1.54
VAMP2-202ENST00000404970 TOP2BQ02880 1626 aa24.63■■□□□ 1.53
VAMP2-202ENST00000404970 EIF4G3O43432 1585 aaKnown RBP24.62■■□□□ 1.53
VAMP2-202ENST00000404970 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
VAMP2-202ENST00000404970 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
VAMP2-202ENST00000404970 SOGA1O94964 1423 aa24.57■■□□□ 1.52
VAMP2-202ENST00000404970 AQRO60306 1485 aaKnown RBP eCLIP24.52■■□□□ 1.522e-9■■■■■ 31
VAMP2-202ENST00000404970 TDRD9Q8NDG6 1382 aaKnown RBP24.46■■□□□ 1.51
VAMP2-202ENST00000404970 ABCA10Q8WWZ4 1543 aa24.45■■□□□ 1.5
VAMP2-202ENST00000404970 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
VAMP2-202ENST00000404970 PBRM1Q86U86 1689 aa24.39■■□□□ 1.5
VAMP2-202ENST00000404970 CHD1O14646 1710 aa24.34■■□□□ 1.49
VAMP2-202ENST00000404970 GAPVD1Q14C86 1478 aa24.32■■□□□ 1.48
VAMP2-202ENST00000404970 SNAPC4Q5SXM2 1469 aa24.31■■□□□ 1.48
VAMP2-202ENST00000404970 GRIN2BQ13224 1484 aa24.29■■□□□ 1.48
VAMP2-202ENST00000404970 MAGI1Q96QZ7 1491 aaPredicted RBP24.22■■□□□ 1.47
VAMP2-202ENST00000404970 ADAMTS12P58397 1594 aa24.18■■□□□ 1.46
VAMP2-202ENST00000404970 ERICH3Q5RHP9 1530 aa24.14■■□□□ 1.45
VAMP2-202ENST00000404970 SYNJ2O15056 1496 aa24.13■■□□□ 1.45
VAMP2-202ENST00000404970 OSCARQ8IYS5 282 aa24.13■■□□□ 1.45
VAMP2-202ENST00000404970 FBLN2P98095 1184 aa24.08■■□□□ 1.45
VAMP2-202ENST00000404970 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
VAMP2-202ENST00000404970 CLASP1Q7Z460 1538 aa24.03■■□□□ 1.44
VAMP2-202ENST00000404970 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
VAMP2-202ENST00000404970 GRIN2AQ12879 1464 aa24.02■■□□□ 1.44
VAMP2-202ENST00000404970 FHAD1B1AJZ9 1412 aa24.02■■□□□ 1.44
VAMP2-202ENST00000404970 CHMP7Q8WUX9 453 aaPredicted RBP24.01■■□□□ 1.43
VAMP2-202ENST00000404970 IGF1RP08069 1367 aa23.99■■□□□ 1.43
VAMP2-202ENST00000404970 TRIM41Q8WV44 630 aa23.99■■□□□ 1.43
VAMP2-202ENST00000404970 CEP170Q5SW79 1584 aa23.97■■□□□ 1.43
VAMP2-202ENST00000404970 CUL7Q14999 1698 aa23.97■■□□□ 1.43
VAMP2-202ENST00000404970 RIMBP3CA6NJZ7 1639 aa23.93■■□□□ 1.42
VAMP2-202ENST00000404970 RIMBP3BA6NNM3 1639 aa23.93■■□□□ 1.42
VAMP2-202ENST00000404970 RIMBP3Q9UFD9 1639 aa23.93■■□□□ 1.42
VAMP2-202ENST00000404970 NUP160Q12769 1436 aa23.91■■□□□ 1.42
VAMP2-202ENST00000404970 ARHGEF11O15085 1522 aa23.89■■□□□ 1.42
VAMP2-202ENST00000404970 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
VAMP2-202ENST00000404970 CARMIL1Q5VZK9 1371 aa23.81■■□□□ 1.4
VAMP2-202ENST00000404970 SHROOM2Q13796 1616 aa23.79■■□□□ 1.4
VAMP2-202ENST00000404970 ERCC6L2Q5T890 1561 aa23.76■■□□□ 1.39
VAMP2-202ENST00000404970 ARAP1Q96P48 1450 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms