RNA–Protein interactions for RNA: ENST00000554044.5

PSMC6-206, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 5

Gene PSMC6, Length 844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-206ENST00000554044 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
PSMC6-206ENST00000554044 CHIC1Q5VXU3 224 aa27.48■■□□□ 1.99
PSMC6-206ENST00000554044 PHF23Q9BUL5 403 aaPredicted RBP24.19■■□□□ 1.46
PSMC6-206ENST00000554044 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
PSMC6-206ENST00000554044 PLPPR3Q6T4P5 718 aa22.29■■□□□ 1.16
PSMC6-206ENST00000554044 FOXD1Q16676 465 aa22.23■■□□□ 1.15
PSMC6-206ENST00000554044 PPP6R1Q9UPN7 881 aa21.38■■□□□ 1.01
PSMC6-206ENST00000554044 ADRA2BP18089 450 aa21.37■■□□□ 1.01
PSMC6-206ENST00000554044 PIAS4Q8N2W9 510 aaPredicted RBP20.98■□□□□ 0.95
PSMC6-206ENST00000554044 MSH5O43196 834 aa20.48■□□□□ 0.87
PSMC6-206ENST00000554044 PPP4R3CPQ6ZMV5 832 aa19.66■□□□□ 0.74
PSMC6-206ENST00000554044 SCAF1Q9H7N4 1312 aaKnown RBP19.48■□□□□ 0.71
PSMC6-206ENST00000554044 MAPK8IP2Q13387 824 aaPredicted RBP19.41■□□□□ 0.7
PSMC6-206ENST00000554044 KCNA4P22459 653 aa19.19■□□□□ 0.66
PSMC6-206ENST00000554044 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
PSMC6-206ENST00000554044 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
PSMC6-206ENST00000554044 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.64
PSMC6-206ENST00000554044 NPM3O75607 178 aaKnown RBP18.86■□□□□ 0.61
PSMC6-206ENST00000554044 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
PSMC6-206ENST00000554044 RNF216Q9NWF9 866 aaPredicted RBP18.72■□□□□ 0.59
PSMC6-206ENST00000554044 HOXD11P31277 338 aaPredicted RBP18.64■□□□□ 0.57
PSMC6-206ENST00000554044 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
PSMC6-206ENST00000554044 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
PSMC6-206ENST00000554044 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
PSMC6-206ENST00000554044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.84■□□□□ 0.45
PSMC6-206ENST00000554044 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
PSMC6-206ENST00000554044 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
PSMC6-206ENST00000554044 ZBTB22O15209 634 aa17.66■□□□□ 0.42
PSMC6-206ENST00000554044 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
PSMC6-206ENST00000554044 RNF39Q9H2S5 420 aa17.56■□□□□ 0.4
PSMC6-206ENST00000554044 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
PSMC6-206ENST00000554044 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
PSMC6-206ENST00000554044 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
PSMC6-206ENST00000554044 C1QBPQ07021 282 aaKnown RBP17.33■□□□□ 0.36
PSMC6-206ENST00000554044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.24■□□□□ 0.35
PSMC6-206ENST00000554044 HNRNPUL2Q1KMD3 747 aaKnown RBP17.24■□□□□ 0.35
PSMC6-206ENST00000554044 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
PSMC6-206ENST00000554044 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
PSMC6-206ENST00000554044 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
PSMC6-206ENST00000554044 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
PSMC6-206ENST00000554044 APLP2Q06481 763 aa17.06■□□□□ 0.32
PSMC6-206ENST00000554044 CAPN15O75808 1086 aa17.03■□□□□ 0.32
PSMC6-206ENST00000554044 ATF5Q9Y2D1 282 aaPredicted RBP17■□□□□ 0.31
PSMC6-206ENST00000554044 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
PSMC6-206ENST00000554044 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
PSMC6-206ENST00000554044 ZNF219Q9P2Y4 722 aaPredicted RBP16.87■□□□□ 0.29
PSMC6-206ENST00000554044 ABCB7O75027 752 aa16.72■□□□□ 0.27
PSMC6-206ENST00000554044 DSG3P32926 999 aa16.71■□□□□ 0.27
PSMC6-206ENST00000554044 POLA2Q14181 598 aa16.63■□□□□ 0.25
PSMC6-206ENST00000554044 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
PSMC6-206ENST00000554044 FBLN2P98095 1184 aa16.25■□□□□ 0.19
PSMC6-206ENST00000554044 MKRN4PQ13434 485 aaPredicted RBP16.23■□□□□ 0.19
PSMC6-206ENST00000554044 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
PSMC6-206ENST00000554044 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
PSMC6-206ENST00000554044 SPDYE2BA6NHP3 402 aa15.86■□□□□ 0.13
PSMC6-206ENST00000554044 SPDYE6P0CI01 402 aa15.86■□□□□ 0.13
PSMC6-206ENST00000554044 FKBP8Q14318 412 aa15.86■□□□□ 0.13
PSMC6-206ENST00000554044 SPDYE2Q495Y8 402 aa15.86■□□□□ 0.13
PSMC6-206ENST00000554044 SPDYE4A6NLX3 237 aa15.85■□□□□ 0.13
PSMC6-206ENST00000554044 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.12
PSMC6-206ENST00000554044 SSUH2Q9Y2M2 353 aa15.73■□□□□ 0.11
PSMC6-206ENST00000554044 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
PSMC6-206ENST00000554044 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
PSMC6-206ENST00000554044 REM2Q8IYK8 340 aaPredicted RBP15.57■□□□□ 0.08
PSMC6-206ENST00000554044 PROM2Q8N271 834 aa15.51■□□□□ 0.07
PSMC6-206ENST00000554044 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
PSMC6-206ENST00000554044 PITPNM1O00562 1244 aa15.41■□□□□ 0.06
PSMC6-206ENST00000554044 SPDYE1Q8NFV5 336 aaPredicted RBP15.41■□□□□ 0.06
PSMC6-206ENST00000554044 STAG3Q9UJ98 1225 aa15.3■□□□□ 0.04
PSMC6-206ENST00000554044 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
PSMC6-206ENST00000554044 CCDC180Q9P1Z9 1646 aa15.26■□□□□ 0.03
PSMC6-206ENST00000554044 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
PSMC6-206ENST00000554044 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
PSMC6-206ENST00000554044 FXR2P51116 673 aaKnown RBP eCLIP15.09■□□□□ 0.01
PSMC6-206ENST00000554044 PIP4P2Q8N4L2 257 aa15.09■□□□□ 0.01
PSMC6-206ENST00000554044 VASPP50552 380 aaPredicted RBP15.07■□□□□ 0
PSMC6-206ENST00000554044 CHADLQ6NUI6 762 aa15.06■□□□□ 0
PSMC6-206ENST00000554044 MIER1Q8N108 512 aa15.04■□□□□ -0
PSMC6-206ENST00000554044 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
PSMC6-206ENST00000554044 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
PSMC6-206ENST00000554044 CREBZFQ9NS37 354 aa15.02■□□□□ -0
PSMC6-206ENST00000554044 PLEKHG5O94827 1062 aa14.95□□□□□ -0.02
PSMC6-206ENST00000554044 POTEHQ6S545 545 aa14.86□□□□□ -0.03
PSMC6-206ENST00000554044 IFNLR1Q8IU57 520 aaPredicted RBP14.86□□□□□ -0.03
PSMC6-206ENST00000554044 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
PSMC6-206ENST00000554044 FARP1Q9Y4F1 1045 aaPredicted RBP14.85□□□□□ -0.03
PSMC6-206ENST00000554044 MNX1P50219 401 aaPredicted RBP14.84□□□□□ -0.03
PSMC6-206ENST00000554044 ABCC9O60706 1549 aa14.81□□□□□ -0.04
PSMC6-206ENST00000554044 ZBTB47Q9UFB7 747 aaPredicted RBP14.8□□□□□ -0.04
PSMC6-206ENST00000554044 NPM1P06748 294 aaKnown RBP eCLIP14.75□□□□□ -0.05
PSMC6-206ENST00000554044 SPOCK2Q92563 424 aa14.67□□□□□ -0.06
PSMC6-206ENST00000554044 HAX1O00165 279 aa14.64□□□□□ -0.07
PSMC6-206ENST00000554044 NUBP1P53384 320 aa14.63□□□□□ -0.07
PSMC6-206ENST00000554044 RASEFQ8IZ41 740 aa14.62□□□□□ -0.07
PSMC6-206ENST00000554044 CD44P16070 742 aaKnown RBP14.6□□□□□ -0.07
PSMC6-206ENST00000554044 TSPYL2Q9H2G4 693 aaPredicted RBP14.58□□□□□ -0.08
PSMC6-206ENST00000554044 C19orf67A6NJJ6 358 aa14.57□□□□□ -0.08
PSMC6-206ENST00000554044 PAK3O75914 559 aaPredicted RBP14.53□□□□□ -0.08
PSMC6-206ENST00000554044 FAM212AQ96EL1 285 aa14.53□□□□□ -0.08
PSMC6-206ENST00000554044 EVX2Q03828 476 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms