RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
SRRT-205ENST00000449389 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
SRRT-205ENST00000449389 ABCC9O60706 1549 aa23.89■■□□□ 1.42
SRRT-205ENST00000449389 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
SRRT-205ENST00000449389 NACADO15069 1562 aa22.72■■□□□ 1.23
SRRT-205ENST00000449389 DCAF8L2P0C7V8 631 aa22.59■■□□□ 1.21
SRRT-205ENST00000449389 MYO15BQ96JP2 1530 aa22.48■■□□□ 1.19
SRRT-205ENST00000449389 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
SRRT-205ENST00000449389 PABPN1Q86U42 306 aaKnown RBP eCLIP22.26■■□□□ 1.156e-11■□□□□ 8.2
SRRT-205ENST00000449389 DNAJC5BQ9UF47 199 aa22.26■■□□□ 1.15
SRRT-205ENST00000449389 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
SRRT-205ENST00000449389 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
SRRT-205ENST00000449389 BICRAQ9NZM4 1560 aa22.13■■□□□ 1.13
SRRT-205ENST00000449389 SHROOM4Q9ULL8 1493 aa21.93■■□□□ 1.1
SRRT-205ENST00000449389 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
SRRT-205ENST00000449389 EIF4G1Q04637 1599 aaKnown RBP21.59■■□□□ 1.05
SRRT-205ENST00000449389 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.05
SRRT-205ENST00000449389 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
SRRT-205ENST00000449389 NCAPD3P42695 1498 aa20.97■□□□□ 0.95
SRRT-205ENST00000449389 ATAD2BQ9ULI0 1458 aa20.92■□□□□ 0.94
SRRT-205ENST00000449389 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
SRRT-205ENST00000449389 SMARCA2P51531 1590 aa20.88■□□□□ 0.93
SRRT-205ENST00000449389 BAZ1AQ9NRL2 1556 aaPredicted RBP20.86■□□□□ 0.93
SRRT-205ENST00000449389 HMGXB3Q12766 1538 aa20.83■□□□□ 0.93
SRRT-205ENST00000449389 PEG3Q9GZU2 1588 aa20.74■□□□□ 0.91
SRRT-205ENST00000449389 BAZ1BQ9UIG0 1483 aaKnown RBP20.73■□□□□ 0.91
SRRT-205ENST00000449389 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
SRRT-205ENST00000449389 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
SRRT-205ENST00000449389 CUX2O14529 1486 aa20.57■□□□□ 0.88
SRRT-205ENST00000449389 NESP48681 1621 aa20.55■□□□□ 0.88
SRRT-205ENST00000449389 LAMC3Q9Y6N6 1575 aa20.47■□□□□ 0.87
SRRT-205ENST00000449389 WIZO95785 1651 aa20.42■□□□□ 0.86
SRRT-205ENST00000449389 DNAJC5Q9H3Z4 198 aa20.37■□□□□ 0.85
SRRT-205ENST00000449389 PDS5BQ9NTI5 1447 aa20.36■□□□□ 0.85
SRRT-205ENST00000449389 CADPSQ9ULU8 1353 aa20.34■□□□□ 0.85
SRRT-205ENST00000449389 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
SRRT-205ENST00000449389 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
SRRT-205ENST00000449389 KIF21AQ7Z4S6 1674 aa20.28■□□□□ 0.84
SRRT-205ENST00000449389 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
SRRT-205ENST00000449389 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
SRRT-205ENST00000449389 CFTRP13569 1480 aa20.14■□□□□ 0.81
SRRT-205ENST00000449389 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
SRRT-205ENST00000449389 WDR62O43379 1518 aa20.11■□□□□ 0.81
SRRT-205ENST00000449389 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
SRRT-205ENST00000449389 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
SRRT-205ENST00000449389 URB2Q14146 1524 aaKnown RBP19.92■□□□□ 0.78
SRRT-205ENST00000449389 PRDM2Q13029 1718 aa19.9■□□□□ 0.78
SRRT-205ENST00000449389 TOPBP1Q92547 1522 aa19.73■□□□□ 0.75
SRRT-205ENST00000449389 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
SRRT-205ENST00000449389 IFT140Q96RY7 1462 aa19.72■□□□□ 0.75
SRRT-205ENST00000449389 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
SRRT-205ENST00000449389 OSCARQ8IYS5 282 aa19.64■□□□□ 0.73
SRRT-205ENST00000449389 ZNF608Q9ULD9 1512 aaPredicted RBP19.64■□□□□ 0.73
SRRT-205ENST00000449389 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
SRRT-205ENST00000449389 EIF4G3O43432 1585 aaKnown RBP19.54■□□□□ 0.72
SRRT-205ENST00000449389 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
SRRT-205ENST00000449389 TRIM41Q8WV44 630 aa19.52■□□□□ 0.72
SRRT-205ENST00000449389 SUPT5HO00267 1087 aaKnown RBP19.51■□□□□ 0.71
SRRT-205ENST00000449389 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.712e-11■■■■□ 24.1
SRRT-205ENST00000449389 SOGA1O94964 1423 aa19.46■□□□□ 0.71
SRRT-205ENST00000449389 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
SRRT-205ENST00000449389 FGD5Q6ZNL6 1462 aa19.44■□□□□ 0.7
SRRT-205ENST00000449389 CUX1P39880 1505 aa19.43■□□□□ 0.7
SRRT-205ENST00000449389 TDRD9Q8NDG6 1382 aaKnown RBP19.39■□□□□ 0.69
SRRT-205ENST00000449389 WDR97A6NE52 1622 aa19.39■□□□□ 0.69
SRRT-205ENST00000449389 CHD1O14646 1710 aa19.34■□□□□ 0.69
SRRT-205ENST00000449389 RIMBP3CA6NJZ7 1639 aa19.34■□□□□ 0.69
SRRT-205ENST00000449389 RIMBP3BA6NNM3 1639 aa19.34■□□□□ 0.69
SRRT-205ENST00000449389 RIMBP3Q9UFD9 1639 aa19.34■□□□□ 0.69
SRRT-205ENST00000449389 FBLN2P98095 1184 aa19.33■□□□□ 0.68
SRRT-205ENST00000449389 ARHGEF11O15085 1522 aa19.32■□□□□ 0.68
SRRT-205ENST00000449389 SNAPC4Q5SXM2 1469 aa19.3■□□□□ 0.68
SRRT-205ENST00000449389 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
SRRT-205ENST00000449389 MAGI1Q96QZ7 1491 aaPredicted RBP19.28■□□□□ 0.68
SRRT-205ENST00000449389 ABCA10Q8WWZ4 1543 aa19.24■□□□□ 0.67
SRRT-205ENST00000449389 CHMP7Q8WUX9 453 aaPredicted RBP19.23■□□□□ 0.67
SRRT-205ENST00000449389 GAPVD1Q14C86 1478 aa19.22■□□□□ 0.67
SRRT-205ENST00000449389 SYNJ2O15056 1496 aa19.21■□□□□ 0.67
SRRT-205ENST00000449389 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
SRRT-205ENST00000449389 ABCA5Q8WWZ7 1642 aa19.18■□□□□ 0.66
SRRT-205ENST00000449389 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
SRRT-205ENST00000449389 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
SRRT-205ENST00000449389 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
SRRT-205ENST00000449389 CLASP1Q7Z460 1538 aa19.16■□□□□ 0.66
SRRT-205ENST00000449389 BIVM-ERCC5R4GMW8 1640 aa19.16■□□□□ 0.66
SRRT-205ENST00000449389 CYB5RLQ6IPT4 315 aa19.15■□□□□ 0.66
SRRT-205ENST00000449389 ARAP1Q96P48 1450 aa19.14■□□□□ 0.65
SRRT-205ENST00000449389 GRIN2AQ12879 1464 aa19.03■□□□□ 0.64
SRRT-205ENST00000449389 ADAMTS12P58397 1594 aa19.03■□□□□ 0.64
SRRT-205ENST00000449389 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
SRRT-205ENST00000449389 ERICH3Q5RHP9 1530 aa19■□□□□ 0.63
SRRT-205ENST00000449389 NUP160Q12769 1436 aa18.97■□□□□ 0.63
SRRT-205ENST00000449389 CEP170Q5SW79 1584 aa18.93■□□□□ 0.62
SRRT-205ENST00000449389 TRHP20396 242 aaPredicted RBP18.9■□□□□ 0.62
SRRT-205ENST00000449389 SHROOM2Q13796 1616 aa18.85■□□□□ 0.61
SRRT-205ENST00000449389 ERCC6L2Q5T890 1561 aa18.84■□□□□ 0.61
SRRT-205ENST00000449389 KIF27Q86VH2 1401 aa18.83■□□□□ 0.6
SRRT-205ENST00000449389 IGF1RP08069 1367 aa18.78■□□□□ 0.6
SRRT-205ENST00000449389 PRG4Q92954 1404 aaPredicted RBP18.76■□□□□ 0.59
SRRT-205ENST00000449389 RUSC2Q8N2Y8 1516 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms