RNA–Protein interactions for RNA: ENST00000606149.5

PSMC6-218, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSMC6, Length 1,560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-218ENST00000606149 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
PSMC6-218ENST00000606149 CHIC1Q5VXU3 224 aa26.2■■□□□ 1.78
PSMC6-218ENST00000606149 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
PSMC6-218ENST00000606149 PHF23Q9BUL5 403 aaPredicted RBP23.02■■□□□ 1.28
PSMC6-218ENST00000606149 FOXD1Q16676 465 aa21.66■■□□□ 1.06
PSMC6-218ENST00000606149 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
PSMC6-218ENST00000606149 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
PSMC6-218ENST00000606149 ADRA2BP18089 450 aa20.35■□□□□ 0.85
PSMC6-218ENST00000606149 PIAS4Q8N2W9 510 aaPredicted RBP20.31■□□□□ 0.84
PSMC6-218ENST00000606149 MSH5O43196 834 aa20.26■□□□□ 0.83
PSMC6-218ENST00000606149 POTEDQ86YR6 584 aa19.32■□□□□ 0.68
PSMC6-218ENST00000606149 SCAF1Q9H7N4 1312 aaKnown RBP18.73■□□□□ 0.59
PSMC6-218ENST00000606149 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
PSMC6-218ENST00000606149 DMRT2Q9Y5R5 561 aa18.52■□□□□ 0.56
PSMC6-218ENST00000606149 PPP4R3CPQ6ZMV5 832 aa18.46■□□□□ 0.55
PSMC6-218ENST00000606149 CNKSR2Q8WXI2 1034 aa18.09■□□□□ 0.49
PSMC6-218ENST00000606149 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
PSMC6-218ENST00000606149 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
PSMC6-218ENST00000606149 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
PSMC6-218ENST00000606149 DCAF8L1A6NGE4 600 aa17.71■□□□□ 0.43
PSMC6-218ENST00000606149 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
PSMC6-218ENST00000606149 KCNA4P22459 653 aa17.4■□□□□ 0.38
PSMC6-218ENST00000606149 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
PSMC6-218ENST00000606149 RNF39Q9H2S5 420 aa17.28■□□□□ 0.36
PSMC6-218ENST00000606149 CACNB1Q02641 598 aaPredicted RBP17.2■□□□□ 0.34
PSMC6-218ENST00000606149 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.32
PSMC6-218ENST00000606149 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
PSMC6-218ENST00000606149 U3KPZ7 1027 aaPredicted RBP16.72■□□□□ 0.27
PSMC6-218ENST00000606149 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
PSMC6-218ENST00000606149 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
PSMC6-218ENST00000606149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.43■□□□□ 0.22
PSMC6-218ENST00000606149 HNRNPUL2Q1KMD3 747 aaKnown RBP16.43■□□□□ 0.22
PSMC6-218ENST00000606149 APLP2Q06481 763 aa16.39■□□□□ 0.21
PSMC6-218ENST00000606149 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
PSMC6-218ENST00000606149 CAPN15O75808 1086 aa16.38■□□□□ 0.21
PSMC6-218ENST00000606149 SAMD1Q6SPF0 538 aaPredicted RBP16.32■□□□□ 0.2
PSMC6-218ENST00000606149 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
PSMC6-218ENST00000606149 DSG3P32926 999 aa16.24■□□□□ 0.19
PSMC6-218ENST00000606149 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
PSMC6-218ENST00000606149 ZNF219Q9P2Y4 722 aaPredicted RBP16.21■□□□□ 0.18
PSMC6-218ENST00000606149 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
PSMC6-218ENST00000606149 ABCB7O75027 752 aa15.98■□□□□ 0.15
PSMC6-218ENST00000606149 ZBTB22O15209 634 aa15.97■□□□□ 0.15
PSMC6-218ENST00000606149 POLA2Q14181 598 aa15.79■□□□□ 0.12
PSMC6-218ENST00000606149 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
PSMC6-218ENST00000606149 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
PSMC6-218ENST00000606149 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
PSMC6-218ENST00000606149 RBM42Q9BTD8 480 aaKnown RBP15.56■□□□□ 0.08
PSMC6-218ENST00000606149 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
PSMC6-218ENST00000606149 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
PSMC6-218ENST00000606149 OSCARQ8IYS5 282 aa15.27■□□□□ 0.03
PSMC6-218ENST00000606149 FBLN2P98095 1184 aa15.25■□□□□ 0.03
PSMC6-218ENST00000606149 AKT1S1Q96B36 256 aa15.23■□□□□ 0.03
PSMC6-218ENST00000606149 POTEHQ6S545 545 aa15.2■□□□□ 0.02
PSMC6-218ENST00000606149 MKRN4PQ13434 485 aaPredicted RBP15.1■□□□□ 0.01
PSMC6-218ENST00000606149 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
PSMC6-218ENST00000606149 SPDYE6P0CI01 402 aa15.08■□□□□ 0
PSMC6-218ENST00000606149 SPDYE2Q495Y8 402 aa15.08■□□□□ 0
PSMC6-218ENST00000606149 CHRDL2Q6WN34 429 aa15.07■□□□□ 0
PSMC6-218ENST00000606149 REM2Q8IYK8 340 aaPredicted RBP15.04■□□□□ -0
PSMC6-218ENST00000606149 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
PSMC6-218ENST00000606149 SSUH2Q9Y2M2 353 aa14.88□□□□□ -0.03
PSMC6-218ENST00000606149 PITPNM1O00562 1244 aa14.86□□□□□ -0.03
PSMC6-218ENST00000606149 SPDYE1Q8NFV5 336 aaPredicted RBP14.76□□□□□ -0.05
PSMC6-218ENST00000606149 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
PSMC6-218ENST00000606149 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.05
PSMC6-218ENST00000606149 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
PSMC6-218ENST00000606149 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
PSMC6-218ENST00000606149 SPDYE4A6NLX3 237 aa14.54□□□□□ -0.08
PSMC6-218ENST00000606149 PRR29P0C7W0 189 aa14.5□□□□□ -0.09
PSMC6-218ENST00000606149 PRKAR2AP13861 404 aaKnown RBP14.5□□□□□ -0.09
PSMC6-218ENST00000606149 HAX1O00165 279 aa14.43□□□□□ -0.1
PSMC6-218ENST00000606149 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
PSMC6-218ENST00000606149 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
PSMC6-218ENST00000606149 CHADLQ6NUI6 762 aa14.34□□□□□ -0.11
PSMC6-218ENST00000606149 PROM2Q8N271 834 aa14.24□□□□□ -0.13
PSMC6-218ENST00000606149 C19orf67A6NJJ6 358 aa14.23□□□□□ -0.13
PSMC6-218ENST00000606149 EVX2Q03828 476 aa14.21□□□□□ -0.14
PSMC6-218ENST00000606149 FARP1Q9Y4F1 1045 aaPredicted RBP14.2□□□□□ -0.14
PSMC6-218ENST00000606149 CREBZFQ9NS37 354 aa14.16□□□□□ -0.14
PSMC6-218ENST00000606149 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
PSMC6-218ENST00000606149 FKBP8Q14318 412 aa14.02□□□□□ -0.16
PSMC6-218ENST00000606149 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
PSMC6-218ENST00000606149 GABBR2O75899 941 aa13.96□□□□□ -0.18
PSMC6-218ENST00000606149 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
PSMC6-218ENST00000606149 CLCN6P51797 869 aa13.93□□□□□ -0.18
PSMC6-218ENST00000606149 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
PSMC6-218ENST00000606149 ZRANB1Q9UGI0 708 aa13.88□□□□□ -0.19
PSMC6-218ENST00000606149 PAK3O75914 559 aaPredicted RBP13.88□□□□□ -0.19
PSMC6-218ENST00000606149 ZNF579Q8NAF0 562 aaKnown RBP13.87□□□□□ -0.19
PSMC6-218ENST00000606149 MIER1Q8N108 512 aa13.84□□□□□ -0.19
PSMC6-218ENST00000606149 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.21
PSMC6-218ENST00000606149 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
PSMC6-218ENST00000606149 ZBTB47Q9UFB7 747 aaPredicted RBP13.72□□□□□ -0.21
PSMC6-218ENST00000606149 PHF12Q96QT6 1004 aa13.67□□□□□ -0.22
PSMC6-218ENST00000606149 DCBLD2Q96PD2 775 aa13.66□□□□□ -0.22
PSMC6-218ENST00000606149 TSPYL2Q9H2G4 693 aaPredicted RBP13.66□□□□□ -0.22
PSMC6-218ENST00000606149 GALR2O43603 387 aaPredicted RBP13.63□□□□□ -0.23
PSMC6-218ENST00000606149 POTEIP0CG38 1075 aa13.62□□□□□ -0.23
PSMC6-218ENST00000606149 CCDC61Q9Y6R9 512 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms