RNA–Protein interactions for RNA: ENST00000458317.6

TNS3-209, Transcript of tensin 3, humanhuman

TSL 5 BASIC

Gene TNS3, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-209ENST00000458317 AEBP2Q6ZN18 517 aaPredicted RBP16.71■□□□□ 0.27
TNS3-209ENST00000458317 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
TNS3-209ENST00000458317 NISCHQ9Y2I1 1504 aa16.17■□□□□ 0.18
TNS3-209ENST00000458317 ABCC9O60706 1549 aa15.02■□□□□ -0
TNS3-209ENST00000458317 CCDC180Q9P1Z9 1646 aa14.7□□□□□ -0.06
TNS3-209ENST00000458317 PHF23Q9BUL5 403 aaPredicted RBP14.41□□□□□ -0.1
TNS3-209ENST00000458317 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
TNS3-209ENST00000458317 RB1CC1Q8TDY2 1594 aa14.15□□□□□ -0.14
TNS3-209ENST00000458317 SENP3Q9H4L4 574 aaPredicted RBP14.03□□□□□ -0.16
TNS3-209ENST00000458317 NACADO15069 1562 aa13.95□□□□□ -0.18
TNS3-209ENST00000458317 PABPN1Q86U42 306 aaKnown RBP eCLIP13.91□□□□□ -0.18
TNS3-209ENST00000458317 DCAF8L2P0C7V8 631 aa13.85□□□□□ -0.19
TNS3-209ENST00000458317 UNC13AQ9UPW8 1703 aa13.84□□□□□ -0.19
TNS3-209ENST00000458317 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.22
TNS3-209ENST00000458317 MYO15BQ96JP2 1530 aa13.6□□□□□ -0.23
TNS3-209ENST00000458317 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
TNS3-209ENST00000458317 CC2D2AQ9P2K1 1620 aa13.55□□□□□ -0.24
TNS3-209ENST00000458317 SHROOM4Q9ULL8 1493 aa13.49□□□□□ -0.25
TNS3-209ENST00000458317 EIF4G1Q04637 1599 aaKnown RBP13.43□□□□□ -0.26
TNS3-209ENST00000458317 SCRIBQ14160 1630 aa13.4□□□□□ -0.26
TNS3-209ENST00000458317 DNAJC5Q9H3Z4 198 aa13.39□□□□□ -0.27
TNS3-209ENST00000458317 ZCCHC6Q5VYS8 1495 aaKnown RBP13.34□□□□□ -0.27
TNS3-209ENST00000458317 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
TNS3-209ENST00000458317 PLPPR3Q6T4P5 718 aa13.2□□□□□ -0.3
TNS3-209ENST00000458317 FOXD1Q16676 465 aa13.1□□□□□ -0.31
TNS3-209ENST00000458317 CUX2O14529 1486 aa13.06□□□□□ -0.32
TNS3-209ENST00000458317 ERCC6Q03468 1493 aa13.02□□□□□ -0.33
TNS3-209ENST00000458317 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
TNS3-209ENST00000458317 NESP48681 1621 aa12.79□□□□□ -0.36
TNS3-209ENST00000458317 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
TNS3-209ENST00000458317 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
TNS3-209ENST00000458317 SMARCA2P51531 1590 aa12.75□□□□□ -0.37
TNS3-209ENST00000458317 TRIM41Q8WV44 630 aa12.75□□□□□ -0.37
TNS3-209ENST00000458317 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
TNS3-209ENST00000458317 SMARCA4P51532 1647 aa12.71□□□□□ -0.37
TNS3-209ENST00000458317 PPP6R1Q9UPN7 881 aa12.69□□□□□ -0.38
TNS3-209ENST00000458317 BAZ1BQ9UIG0 1483 aaKnown RBP12.68□□□□□ -0.38
TNS3-209ENST00000458317 KIF21AQ7Z4S6 1674 aa12.66□□□□□ -0.38
TNS3-209ENST00000458317 LAMC3Q9Y6N6 1575 aa12.65□□□□□ -0.38
TNS3-209ENST00000458317 ADRA2BP18089 450 aa12.64□□□□□ -0.39
TNS3-209ENST00000458317 BAZ1AQ9NRL2 1556 aaPredicted RBP12.6□□□□□ -0.39
TNS3-209ENST00000458317 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
TNS3-209ENST00000458317 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
TNS3-209ENST00000458317 MRC2Q9UBG0 1479 aa12.51□□□□□ -0.41
TNS3-209ENST00000458317 WDR62O43379 1518 aa12.47□□□□□ -0.41
TNS3-209ENST00000458317 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.42
TNS3-209ENST00000458317 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
TNS3-209ENST00000458317 CEP164Q9UPV0 1460 aa12.4□□□□□ -0.42
TNS3-209ENST00000458317 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
TNS3-209ENST00000458317 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
TNS3-209ENST00000458317 WIZO95785 1651 aa12.33□□□□□ -0.44
TNS3-209ENST00000458317 RIMBP3CA6NJZ7 1639 aa12.31□□□□□ -0.44
TNS3-209ENST00000458317 RIMBP3BA6NNM3 1639 aa12.31□□□□□ -0.44
TNS3-209ENST00000458317 RIMBP3Q9UFD9 1639 aa12.31□□□□□ -0.44
TNS3-209ENST00000458317 PIAS4Q8N2W9 510 aaPredicted RBP12.3□□□□□ -0.44
TNS3-209ENST00000458317 URB2Q14146 1524 aaKnown RBP12.25□□□□□ -0.45
TNS3-209ENST00000458317 CFTRP13569 1480 aa12.24□□□□□ -0.45
TNS3-209ENST00000458317 ARHGEF11O15085 1522 aa12.22□□□□□ -0.45
TNS3-209ENST00000458317 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
TNS3-209ENST00000458317 ZNF608Q9ULD9 1512 aaPredicted RBP12.16□□□□□ -0.46
TNS3-209ENST00000458317 TRHP20396 242 aaPredicted RBP12.16□□□□□ -0.46
TNS3-209ENST00000458317 CYB5RLQ6IPT4 315 aa12.15□□□□□ -0.46
TNS3-209ENST00000458317 IFT140Q96RY7 1462 aa12.14□□□□□ -0.47
TNS3-209ENST00000458317 TOP2AP11388 1531 aaKnown RBP12.14□□□□□ -0.47
TNS3-209ENST00000458317 EIF4G3O43432 1585 aaKnown RBP12.11□□□□□ -0.47
TNS3-209ENST00000458317 CHD1O14646 1710 aa12.1□□□□□ -0.47
TNS3-209ENST00000458317 TOPBP1Q92547 1522 aa12.07□□□□□ -0.48
TNS3-209ENST00000458317 ARAP1Q96P48 1450 aa12.07□□□□□ -0.48
TNS3-209ENST00000458317 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
TNS3-209ENST00000458317 FBLN2P98095 1184 aa12.04□□□□□ -0.48
TNS3-209ENST00000458317 ABCC8Q09428 1581 aa12.01□□□□□ -0.49
TNS3-209ENST00000458317 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
TNS3-209ENST00000458317 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.491e-6■■□□□ 12
TNS3-209ENST00000458317 TARBP1Q13395 1621 aaKnown RBP11.98□□□□□ -0.49
TNS3-209ENST00000458317 CCDC88BA6NC98 1476 aa11.98□□□□□ -0.49
TNS3-209ENST00000458317 MSH5O43196 834 aa11.95□□□□□ -0.5
TNS3-209ENST00000458317 POLA1P09884 1462 aaPredicted RBP11.92□□□□□ -0.5
TNS3-209ENST00000458317 CLASP1Q7Z460 1538 aa11.91□□□□□ -0.5
TNS3-209ENST00000458317 SYNJ1O43426 1573 aa11.9□□□□□ -0.5
TNS3-209ENST00000458317 SNAPC4Q5SXM2 1469 aa11.89□□□□□ -0.51
TNS3-209ENST00000458317 RAD54L2Q9Y4B4 1467 aa11.89□□□□□ -0.51
TNS3-209ENST00000458317 TDRD9Q8NDG6 1382 aaKnown RBP11.88□□□□□ -0.51
TNS3-209ENST00000458317 CHMP7Q8WUX9 453 aaPredicted RBP11.86□□□□□ -0.51
TNS3-209ENST00000458317 SOGA1O94964 1423 aa11.86□□□□□ -0.51
TNS3-209ENST00000458317 WDR97A6NE52 1622 aa11.84□□□□□ -0.51
TNS3-209ENST00000458317 MAGI1Q96QZ7 1491 aaPredicted RBP11.83□□□□□ -0.52
TNS3-209ENST00000458317 GAPVD1Q14C86 1478 aa11.82□□□□□ -0.52
TNS3-209ENST00000458317 FGD5Q6ZNL6 1462 aa11.82□□□□□ -0.52
TNS3-209ENST00000458317 SYNJ2O15056 1496 aa11.81□□□□□ -0.52
TNS3-209ENST00000458317 GRIN2BQ13224 1484 aa11.79□□□□□ -0.52
TNS3-209ENST00000458317 PBRM1Q86U86 1689 aa11.78□□□□□ -0.52
TNS3-209ENST00000458317 CUX1P39880 1505 aa11.74□□□□□ -0.53
TNS3-209ENST00000458317 ERCC6L2Q5T890 1561 aa11.7□□□□□ -0.54
TNS3-209ENST00000458317 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
TNS3-209ENST00000458317 ABCA5Q8WWZ7 1642 aa11.68□□□□□ -0.54
TNS3-209ENST00000458317 KIF13AQ9H1H9 1805 aa11.67□□□□□ -0.54
TNS3-209ENST00000458317 CEP170Q5SW79 1584 aa11.66□□□□□ -0.54
TNS3-209ENST00000458317 GRIN2AQ12879 1464 aa11.65□□□□□ -0.54
TNS3-209ENST00000458317 ABCA10Q8WWZ4 1543 aa11.64□□□□□ -0.55
TNS3-209ENST00000458317 ADAMTS12P58397 1594 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms