RNA–Protein interactions for RNA: ENST00000539714.5

NCAPD2-208, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 3

Gene NCAPD2, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-208ENST00000539714 AEBP2Q6ZN18 517 aaPredicted RBP20.75■□□□□ 0.91
NCAPD2-208ENST00000539714 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
NCAPD2-208ENST00000539714 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
NCAPD2-208ENST00000539714 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
NCAPD2-208ENST00000539714 PLPPR3Q6T4P5 718 aa16.64■□□□□ 0.25
NCAPD2-208ENST00000539714 FOXD1Q16676 465 aa16.34■□□□□ 0.21
NCAPD2-208ENST00000539714 NISCHQ9Y2I1 1504 aa16.02■□□□□ 0.15
NCAPD2-208ENST00000539714 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
NCAPD2-208ENST00000539714 ADRA2BP18089 450 aa15.81■□□□□ 0.12
NCAPD2-208ENST00000539714 PIAS4Q8N2W9 510 aaPredicted RBP15.43■□□□□ 0.06
NCAPD2-208ENST00000539714 MSH5O43196 834 aa15.04■□□□□ -0
NCAPD2-208ENST00000539714 PPP4R3CPQ6ZMV5 832 aa14.68□□□□□ -0.06
NCAPD2-208ENST00000539714 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
NCAPD2-208ENST00000539714 KCNA4P22459 653 aa14.44□□□□□ -0.1
NCAPD2-208ENST00000539714 NCBP3Q53F19 620 aaKnown RBP14.35□□□□□ -0.11
NCAPD2-208ENST00000539714 MAPK8IP2Q13387 824 aaPredicted RBP14.31□□□□□ -0.12
NCAPD2-208ENST00000539714 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
NCAPD2-208ENST00000539714 CCDC180Q9P1Z9 1646 aa14.22□□□□□ -0.13
NCAPD2-208ENST00000539714 NPM3O75607 178 aaKnown RBP14.1□□□□□ -0.15
NCAPD2-208ENST00000539714 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
NCAPD2-208ENST00000539714 POTEDQ86YR6 584 aa14.07□□□□□ -0.16
NCAPD2-208ENST00000539714 RNF216Q9NWF9 866 aaPredicted RBP13.94□□□□□ -0.18
NCAPD2-208ENST00000539714 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
NCAPD2-208ENST00000539714 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
NCAPD2-208ENST00000539714 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
NCAPD2-208ENST00000539714 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
NCAPD2-208ENST00000539714 EHMT2Q96KQ7 1210 aa13.49□□□□□ -0.25
NCAPD2-208ENST00000539714 DCAF8L1A6NGE4 600 aa13.46□□□□□ -0.25
NCAPD2-208ENST00000539714 DCAF1Q9Y4B6 1507 aa13.35□□□□□ -0.27
NCAPD2-208ENST00000539714 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
NCAPD2-208ENST00000539714 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
NCAPD2-208ENST00000539714 ZBTB22O15209 634 aa13.26□□□□□ -0.29
NCAPD2-208ENST00000539714 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
NCAPD2-208ENST00000539714 MYO15BQ96JP2 1530 aa13.23□□□□□ -0.29
NCAPD2-208ENST00000539714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.2□□□□□ -0.33e-6■□□□□ 8.5
NCAPD2-208ENST00000539714 ABCC9O60706 1549 aa13.18□□□□□ -0.3
NCAPD2-208ENST00000539714 NACADO15069 1562 aa13.12□□□□□ -0.31
NCAPD2-208ENST00000539714 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
NCAPD2-208ENST00000539714 RB1CC1Q8TDY2 1594 aa13.03□□□□□ -0.32
NCAPD2-208ENST00000539714 U3KPZ7 1027 aaPredicted RBP12.97□□□□□ -0.33
NCAPD2-208ENST00000539714 DCAF8L2P0C7V8 631 aa12.93□□□□□ -0.34
NCAPD2-208ENST00000539714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.9□□□□□ -0.34
NCAPD2-208ENST00000539714 HNRNPUL2Q1KMD3 747 aaKnown RBP12.9□□□□□ -0.34
NCAPD2-208ENST00000539714 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
NCAPD2-208ENST00000539714 SCRIBQ14160 1630 aa12.88□□□□□ -0.35
NCAPD2-208ENST00000539714 UNC13AQ9UPW8 1703 aa12.88□□□□□ -0.35
NCAPD2-208ENST00000539714 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
NCAPD2-208ENST00000539714 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
NCAPD2-208ENST00000539714 SHROOM4Q9ULL8 1493 aa12.81□□□□□ -0.36
NCAPD2-208ENST00000539714 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.37
NCAPD2-208ENST00000539714 APLP2Q06481 763 aa12.73□□□□□ -0.37
NCAPD2-208ENST00000539714 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
NCAPD2-208ENST00000539714 BICRAQ9NZM4 1560 aa12.6□□□□□ -0.39
NCAPD2-208ENST00000539714 SPINK5Q9NQ38 1064 aaPredicted RBP12.57□□□□□ -0.4
NCAPD2-208ENST00000539714 CAPN15O75808 1086 aa12.54□□□□□ -0.4
NCAPD2-208ENST00000539714 TRHP20396 242 aaPredicted RBP12.51□□□□□ -0.41
NCAPD2-208ENST00000539714 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
NCAPD2-208ENST00000539714 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
NCAPD2-208ENST00000539714 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
NCAPD2-208ENST00000539714 SMARCA4P51532 1647 aa12.4□□□□□ -0.42
NCAPD2-208ENST00000539714 POLA2Q14181 598 aa12.36□□□□□ -0.43
NCAPD2-208ENST00000539714 CECR2Q9BXF3 1484 aa12.35□□□□□ -0.43
NCAPD2-208ENST00000539714 MROH2BQ7Z745 1585 aa12.33□□□□□ -0.44
NCAPD2-208ENST00000539714 RSF1Q96T23 1441 aaPredicted RBP12.32□□□□□ -0.44
NCAPD2-208ENST00000539714 DSG3P32926 999 aa12.3□□□□□ -0.44
NCAPD2-208ENST00000539714 WIZO95785 1651 aa12.29□□□□□ -0.44
NCAPD2-208ENST00000539714 PEG3Q9GZU2 1588 aa12.29□□□□□ -0.44
NCAPD2-208ENST00000539714 ABCB7O75027 752 aa12.28□□□□□ -0.44
NCAPD2-208ENST00000539714 PABPN1Q86U42 306 aaKnown RBP eCLIP12.27□□□□□ -0.45
NCAPD2-208ENST00000539714 SUPT5HO00267 1087 aaKnown RBP12.25□□□□□ -0.45
NCAPD2-208ENST00000539714 EIF4G1Q04637 1599 aaKnown RBP12.22□□□□□ -0.45
NCAPD2-208ENST00000539714 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.46
NCAPD2-208ENST00000539714 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
NCAPD2-208ENST00000539714 FBLN2P98095 1184 aa12.15□□□□□ -0.46
NCAPD2-208ENST00000539714 ZBTB12Q9Y330 459 aaPredicted RBP12.15□□□□□ -0.46
NCAPD2-208ENST00000539714 HMGXB3Q12766 1538 aa12.12□□□□□ -0.47
NCAPD2-208ENST00000539714 MKRN4PQ13434 485 aaPredicted RBP12.12□□□□□ -0.47
NCAPD2-208ENST00000539714 ATAD2BQ9ULI0 1458 aa12.1□□□□□ -0.47
NCAPD2-208ENST00000539714 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
NCAPD2-208ENST00000539714 CC2D2AQ9P2K1 1620 aa12.04□□□□□ -0.48
NCAPD2-208ENST00000539714 FKBP8Q14318 412 aa12.02□□□□□ -0.49
NCAPD2-208ENST00000539714 NCAPD3P42695 1498 aa12.02□□□□□ -0.49
NCAPD2-208ENST00000539714 PRDM2Q13029 1718 aa11.99□□□□□ -0.49
NCAPD2-208ENST00000539714 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
NCAPD2-208ENST00000539714 SPDYE4A6NLX3 237 aa11.92□□□□□ -0.5
NCAPD2-208ENST00000539714 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
NCAPD2-208ENST00000539714 SPDYE2BA6NHP3 402 aa11.83□□□□□ -0.52
NCAPD2-208ENST00000539714 SPDYE6P0CI01 402 aa11.83□□□□□ -0.52
NCAPD2-208ENST00000539714 SPDYE2Q495Y8 402 aa11.83□□□□□ -0.52
NCAPD2-208ENST00000539714 ZNF692Q9BU19 519 aaPredicted RBP11.81□□□□□ -0.52
NCAPD2-208ENST00000539714 CFTRP13569 1480 aa11.74□□□□□ -0.53
NCAPD2-208ENST00000539714 PROM2Q8N271 834 aa11.73□□□□□ -0.53
NCAPD2-208ENST00000539714 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
NCAPD2-208ENST00000539714 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
NCAPD2-208ENST00000539714 LAMC3Q9Y6N6 1575 aa11.72□□□□□ -0.53
NCAPD2-208ENST00000539714 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.53
NCAPD2-208ENST00000539714 ABCC8Q09428 1581 aa11.71□□□□□ -0.53
NCAPD2-208ENST00000539714 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
NCAPD2-208ENST00000539714 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
NCAPD2-208ENST00000539714 CADPSQ9ULU8 1353 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms