RNA–Protein interactions for RNA: ENST00000458604.6

PSMC6-202, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-202ENST00000458604 AEBP2Q6ZN18 517 aaPredicted RBP29.21■■■□□ 2.27
PSMC6-202ENST00000458604 CHIC1Q5VXU3 224 aa29■■■□□ 2.23
PSMC6-202ENST00000458604 PHF23Q9BUL5 403 aaPredicted RBP25.74■■□□□ 1.71
PSMC6-202ENST00000458604 SENP3Q9H4L4 574 aaPredicted RBP25.06■■□□□ 1.6
PSMC6-202ENST00000458604 PLPPR3Q6T4P5 718 aa24.03■■□□□ 1.44
PSMC6-202ENST00000458604 FOXD1Q16676 465 aa23.38■■□□□ 1.33
PSMC6-202ENST00000458604 ADRA2BP18089 450 aa22.62■■□□□ 1.21
PSMC6-202ENST00000458604 POTEDQ86YR6 584 aa22.39■■□□□ 1.17
PSMC6-202ENST00000458604 KCNA4P22459 653 aa22.37■■□□□ 1.17
PSMC6-202ENST00000458604 PPP6R1Q9UPN7 881 aa22.3■■□□□ 1.16
PSMC6-202ENST00000458604 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
PSMC6-202ENST00000458604 MSH5O43196 834 aa22.11■■□□□ 1.13
PSMC6-202ENST00000458604 PIAS4Q8N2W9 510 aaPredicted RBP21.74■■□□□ 1.07
PSMC6-202ENST00000458604 CSRNP3Q8WYN3 585 aa21.54■■□□□ 1.04
PSMC6-202ENST00000458604 SLC4A1APQ9BWU0 796 aaKnown RBP21.44■■□□□ 1.02
PSMC6-202ENST00000458604 PPP4R3CPQ6ZMV5 832 aa21.38■■□□□ 1.01
PSMC6-202ENST00000458604 NCBP3Q53F19 620 aaKnown RBP21.07■□□□□ 0.96
PSMC6-202ENST00000458604 NPM3O75607 178 aaKnown RBP20.91■□□□□ 0.94
PSMC6-202ENST00000458604 ZBTB22O15209 634 aa20.68■□□□□ 0.9
PSMC6-202ENST00000458604 CNKSR2Q8WXI2 1034 aa20.46■□□□□ 0.87
PSMC6-202ENST00000458604 SCAF1Q9H7N4 1312 aaKnown RBP20.2■□□□□ 0.82
PSMC6-202ENST00000458604 FOXD4L1Q9NU39 408 aa20.15■□□□□ 0.82
PSMC6-202ENST00000458604 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
PSMC6-202ENST00000458604 SLC24A1O60721 1099 aa19.91■□□□□ 0.78
PSMC6-202ENST00000458604 MAPK8IP2Q13387 824 aaPredicted RBP19.88■□□□□ 0.77
PSMC6-202ENST00000458604 RTN4Q9NQC3 1192 aaKnown RBP19.87■□□□□ 0.77
PSMC6-202ENST00000458604 RNF216Q9NWF9 866 aaPredicted RBP19.77■□□□□ 0.76
PSMC6-202ENST00000458604 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
PSMC6-202ENST00000458604 AMER1Q5JTC6 1135 aaPredicted RBP19.75■□□□□ 0.75
PSMC6-202ENST00000458604 SLC4A2P04920 1241 aa19.5■□□□□ 0.71
PSMC6-202ENST00000458604 HOXD11P31277 338 aaPredicted RBP19.4■□□□□ 0.7
PSMC6-202ENST00000458604 FKBP8Q14318 412 aa19.31■□□□□ 0.68
PSMC6-202ENST00000458604 ATXN8OSP0DMR3 200 aa19.3■□□□□ 0.68
PSMC6-202ENST00000458604 CACNB1Q02641 598 aaPredicted RBP19.27■□□□□ 0.68
PSMC6-202ENST00000458604 MYCNP04198 464 aaPredicted RBP19.22■□□□□ 0.67
PSMC6-202ENST00000458604 DCAF8L1A6NGE4 600 aa18.99■□□□□ 0.63
PSMC6-202ENST00000458604 RNF39Q9H2S5 420 aa18.8■□□□□ 0.6
PSMC6-202ENST00000458604 ATF5Q9Y2D1 282 aaPredicted RBP18.75■□□□□ 0.59
PSMC6-202ENST00000458604 C1QBPQ07021 282 aaKnown RBP18.52■□□□□ 0.56
PSMC6-202ENST00000458604 SAMD1Q6SPF0 538 aaPredicted RBP18.41■□□□□ 0.54
PSMC6-202ENST00000458604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.39■□□□□ 0.53
PSMC6-202ENST00000458604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
PSMC6-202ENST00000458604 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
PSMC6-202ENST00000458604 U3KPZ7 1027 aaPredicted RBP18.35■□□□□ 0.53
PSMC6-202ENST00000458604 PLCB2Q00722 1185 aa18.23■□□□□ 0.51
PSMC6-202ENST00000458604 ZNF219Q9P2Y4 722 aaPredicted RBP18.19■□□□□ 0.5
PSMC6-202ENST00000458604 FBXO3Q9UK99 471 aa18.17■□□□□ 0.5
PSMC6-202ENST00000458604 SPDYE4A6NLX3 237 aa18.08■□□□□ 0.48
PSMC6-202ENST00000458604 PROM2Q8N271 834 aa18.07■□□□□ 0.48
PSMC6-202ENST00000458604 VASPP50552 380 aaPredicted RBP18■□□□□ 0.47
PSMC6-202ENST00000458604 MKRN4PQ13434 485 aaPredicted RBP18■□□□□ 0.47
PSMC6-202ENST00000458604 HAP1P54257 671 aaPredicted RBP17.92■□□□□ 0.46
PSMC6-202ENST00000458604 IFNLR1Q8IU57 520 aaPredicted RBP17.91■□□□□ 0.46
PSMC6-202ENST00000458604 APLP2Q06481 763 aa17.83■□□□□ 0.44
PSMC6-202ENST00000458604 PKD2Q13563 968 aa17.81■□□□□ 0.44
PSMC6-202ENST00000458604 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
PSMC6-202ENST00000458604 BCANQ96GW7 911 aa17.75■□□□□ 0.43
PSMC6-202ENST00000458604 PRKCSHP14314 528 aaPredicted RBP17.72■□□□□ 0.43
PSMC6-202ENST00000458604 VSIG10Q8N0Z9 540 aa17.7■□□□□ 0.42
PSMC6-202ENST00000458604 FBLN2P98095 1184 aa17.67■□□□□ 0.42
PSMC6-202ENST00000458604 TAOK2Q9UL54 1235 aa17.62■□□□□ 0.41
PSMC6-202ENST00000458604 KDM2AQ9Y2K7 1162 aa17.51■□□□□ 0.39
PSMC6-202ENST00000458604 POLA2Q14181 598 aa17.5■□□□□ 0.39
PSMC6-202ENST00000458604 SPINK5Q9NQ38 1064 aaPredicted RBP17.48■□□□□ 0.39
PSMC6-202ENST00000458604 TRHP20396 242 aaPredicted RBP17.47■□□□□ 0.39
PSMC6-202ENST00000458604 BBXQ8WY36 941 aaPredicted RBP17.47■□□□□ 0.39
PSMC6-202ENST00000458604 POTEHQ6S545 545 aa17.46■□□□□ 0.39
PSMC6-202ENST00000458604 NPM1P06748 294 aaKnown RBP eCLIP17.45■□□□□ 0.38
PSMC6-202ENST00000458604 CAPN15O75808 1086 aa17.43■□□□□ 0.38
PSMC6-202ENST00000458604 DSG3P32926 999 aa17.43■□□□□ 0.38
PSMC6-202ENST00000458604 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.4■□□□□ 0.38
PSMC6-202ENST00000458604 SPOCK2Q92563 424 aa17.39■□□□□ 0.37
PSMC6-202ENST00000458604 ECM2O94769 699 aaPredicted RBP17.36■□□□□ 0.37
PSMC6-202ENST00000458604 PAXIP1Q6ZW49 1069 aaPredicted RBP17.35■□□□□ 0.37
PSMC6-202ENST00000458604 TPRNQ4KMQ1 711 aa17.34■□□□□ 0.37
PSMC6-202ENST00000458604 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
PSMC6-202ENST00000458604 CFAP44Q96MT7 982 aa17.28■□□□□ 0.36
PSMC6-202ENST00000458604 RGL2O15211 777 aa17.24■□□□□ 0.35
PSMC6-202ENST00000458604 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
PSMC6-202ENST00000458604 TSHZ2Q9NRE2 1034 aa17.16■□□□□ 0.34
PSMC6-202ENST00000458604 STAG3Q9UJ98 1225 aa17.15■□□□□ 0.34
PSMC6-202ENST00000458604 SPRYD3Q8NCJ5 442 aa17.14■□□□□ 0.33
PSMC6-202ENST00000458604 ABCB7O75027 752 aa17.08■□□□□ 0.32
PSMC6-202ENST00000458604 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
PSMC6-202ENST00000458604 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
PSMC6-202ENST00000458604 DNAJC5Q9H3Z4 198 aa16.99■□□□□ 0.31
PSMC6-202ENST00000458604 SSUH2Q9Y2M2 353 aa16.99■□□□□ 0.31
PSMC6-202ENST00000458604 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.31
PSMC6-202ENST00000458604 MIER1Q8N108 512 aa16.96■□□□□ 0.31
PSMC6-202ENST00000458604 SPDYE2BA6NHP3 402 aa16.91■□□□□ 0.3
PSMC6-202ENST00000458604 SPDYE6P0CI01 402 aa16.91■□□□□ 0.3
PSMC6-202ENST00000458604 SPDYE2Q495Y8 402 aa16.91■□□□□ 0.3
PSMC6-202ENST00000458604 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
PSMC6-202ENST00000458604 CIZ1Q9ULV3 898 aaPredicted RBP16.88■□□□□ 0.29
PSMC6-202ENST00000458604 PABPN1Q86U42 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
PSMC6-202ENST00000458604 HS6ST3Q8IZP7 471 aa16.81■□□□□ 0.28
PSMC6-202ENST00000458604 NBR1Q14596 966 aa16.78■□□□□ 0.28
PSMC6-202ENST00000458604 TRIM41Q8WV44 630 aa16.75■□□□□ 0.27
PSMC6-202ENST00000458604 ZBTB47Q9UFB7 747 aaPredicted RBP16.74■□□□□ 0.27
PSMC6-202ENST00000458604 RNF25Q96BH1 459 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms