RNA–Protein interactions for RNA: ENST00000539084.5

NCAPD2-207, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 2

Gene NCAPD2, Length 4,290 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-207ENST00000539084 NISCHQ9Y2I1 1504 aa21.45■■□□□ 1.02
NCAPD2-207ENST00000539084 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
NCAPD2-207ENST00000539084 SHROOM4Q9ULL8 1493 aa18.83■□□□□ 0.6
NCAPD2-207ENST00000539084 SUPT5HO00267 1087 aaKnown RBP18.63■□□□□ 0.57
NCAPD2-207ENST00000539084 ABCC9O60706 1549 aa18.5■□□□□ 0.55
NCAPD2-207ENST00000539084 CCDC180Q9P1Z9 1646 aa18.3■□□□□ 0.52
NCAPD2-207ENST00000539084 PABPN1Q86U42 306 aaKnown RBP eCLIP17.84■□□□□ 0.45
NCAPD2-207ENST00000539084 ZCCHC6Q5VYS8 1495 aaKnown RBP17.8■□□□□ 0.44
NCAPD2-207ENST00000539084 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
NCAPD2-207ENST00000539084 FAM9AQ8IZU1 332 aaPredicted RBP17.6■□□□□ 0.41
NCAPD2-207ENST00000539084 NACADO15069 1562 aa17.59■□□□□ 0.41
NCAPD2-207ENST00000539084 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
NCAPD2-207ENST00000539084 SCRIBQ14160 1630 aa17.49■□□□□ 0.39
NCAPD2-207ENST00000539084 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
NCAPD2-207ENST00000539084 DCAF1Q9Y4B6 1507 aa17.38■□□□□ 0.37
NCAPD2-207ENST00000539084 APLP2Q06481 763 aa17.37■□□□□ 0.37
NCAPD2-207ENST00000539084 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
NCAPD2-207ENST00000539084 UBTFP17480 764 aaKnown RBP17.15■□□□□ 0.34
NCAPD2-207ENST00000539084 RANGAP1P46060 587 aaPredicted RBP17.04■□□□□ 0.32
NCAPD2-207ENST00000539084 ATP1B4Q9UN42 357 aaPredicted RBP16.96■□□□□ 0.31
NCAPD2-207ENST00000539084 CHIC1Q5VXU3 224 aa16.91■□□□□ 0.3
NCAPD2-207ENST00000539084 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
NCAPD2-207ENST00000539084 BAZ1BQ9UIG0 1483 aaKnown RBP16.83■□□□□ 0.28
NCAPD2-207ENST00000539084 RSF1Q96T23 1441 aaPredicted RBP16.78■□□□□ 0.28
NCAPD2-207ENST00000539084 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.27
NCAPD2-207ENST00000539084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
NCAPD2-207ENST00000539084 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
NCAPD2-207ENST00000539084 FBLN2P98095 1184 aa16.66■□□□□ 0.26
NCAPD2-207ENST00000539084 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
NCAPD2-207ENST00000539084 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
NCAPD2-207ENST00000539084 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
NCAPD2-207ENST00000539084 ERCC6Q03468 1493 aa16.52■□□□□ 0.24
NCAPD2-207ENST00000539084 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
NCAPD2-207ENST00000539084 LOC105371045A0A1W2PR82 267 aa16.46■□□□□ 0.23
NCAPD2-207ENST00000539084 MYT1LQ9UL68 1186 aa16.44■□□□□ 0.22
NCAPD2-207ENST00000539084 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
NCAPD2-207ENST00000539084 ATAD2BQ9ULI0 1458 aa16.39■□□□□ 0.21
NCAPD2-207ENST00000539084 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
NCAPD2-207ENST00000539084 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
NCAPD2-207ENST00000539084 SMARCA4P51532 1647 aa16.36■□□□□ 0.21
NCAPD2-207ENST00000539084 CHMP7Q8WUX9 453 aaPredicted RBP16.34■□□□□ 0.21
NCAPD2-207ENST00000539084 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
NCAPD2-207ENST00000539084 EEA1Q15075 1411 aa16.29■□□□□ 0.2
NCAPD2-207ENST00000539084 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.19
NCAPD2-207ENST00000539084 PPARGC1BQ86YN6 1023 aaKnown RBP16.27■□□□□ 0.19
NCAPD2-207ENST00000539084 CCDC88BA6NC98 1476 aa16.27■□□□□ 0.19
NCAPD2-207ENST00000539084 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
NCAPD2-207ENST00000539084 CDK11AQ9UQ88 783 aaPredicted RBP16.25■□□□□ 0.19
NCAPD2-207ENST00000539084 NPM1P06748 294 aaKnown RBP eCLIP16.24■□□□□ 0.19
NCAPD2-207ENST00000539084 CCER1Q8TC90 406 aaPredicted RBP16.24■□□□□ 0.19
NCAPD2-207ENST00000539084 KIF27Q86VH2 1401 aa16.24■□□□□ 0.19
NCAPD2-207ENST00000539084 WIZO95785 1651 aa16.21■□□□□ 0.19
NCAPD2-207ENST00000539084 ITGAEP38570 1179 aa16.21■□□□□ 0.19
NCAPD2-207ENST00000539084 NCAPD3P42695 1498 aa16.21■□□□□ 0.18
NCAPD2-207ENST00000539084 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
NCAPD2-207ENST00000539084 TRIM26Q12899 539 aaPredicted RBP16.2■□□□□ 0.18
NCAPD2-207ENST00000539084 ZEB1P37275 1124 aaPredicted RBP16.19■□□□□ 0.18
NCAPD2-207ENST00000539084 FAM50AQ14320 339 aaKnown RBP16.11■□□□□ 0.17
NCAPD2-207ENST00000539084 CEP164Q9UPV0 1460 aa16.11■□□□□ 0.17
NCAPD2-207ENST00000539084 CUX2O14529 1486 aa16.05■□□□□ 0.16
NCAPD2-207ENST00000539084 ABCC8Q09428 1581 aa16.05■□□□□ 0.16
NCAPD2-207ENST00000539084 BICRAQ9NZM4 1560 aa16.05■□□□□ 0.16
NCAPD2-207ENST00000539084 ARID3CA6NKF2 412 aa16.04■□□□□ 0.16
NCAPD2-207ENST00000539084 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
NCAPD2-207ENST00000539084 SOGA1O94964 1423 aa16.02■□□□□ 0.16
NCAPD2-207ENST00000539084 CC2D2AQ9P2K1 1620 aa16.02■□□□□ 0.16
NCAPD2-207ENST00000539084 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.16
NCAPD2-207ENST00000539084 HMGXB3Q12766 1538 aa16■□□□□ 0.15
NCAPD2-207ENST00000539084 CARMIL1Q5VZK9 1371 aa15.96■□□□□ 0.15
NCAPD2-207ENST00000539084 CLIP1P30622 1438 aa15.95■□□□□ 0.14
NCAPD2-207ENST00000539084 ZNF777Q9ULD5 760 aaPredicted RBP15.91■□□□□ 0.14
NCAPD2-207ENST00000539084 TDRD9Q8NDG6 1382 aaKnown RBP15.9■□□□□ 0.14
NCAPD2-207ENST00000539084 TRIM52Q96A61 297 aa15.9■□□□□ 0.14
NCAPD2-207ENST00000539084 MTUS2Q5JR59 1369 aa15.87■□□□□ 0.13
NCAPD2-207ENST00000539084 PLEKHD1A6NEE1 506 aa15.85■□□□□ 0.13
NCAPD2-207ENST00000539084 TNIKQ9UKE5 1360 aa15.85■□□□□ 0.13
NCAPD2-207ENST00000539084 ESF1Q9H501 851 aaKnown RBP15.82■□□□□ 0.12
NCAPD2-207ENST00000539084 CFTRP13569 1480 aa15.81■□□□□ 0.12
NCAPD2-207ENST00000539084 CARMIL2Q6F5E8 1435 aa15.81■□□□□ 0.12
NCAPD2-207ENST00000539084 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
NCAPD2-207ENST00000539084 CEP162Q5TB80 1403 aa15.78■□□□□ 0.12
NCAPD2-207ENST00000539084 FHAD1B1AJZ9 1412 aa15.75■□□□□ 0.11
NCAPD2-207ENST00000539084 TSPY4P0CV99 314 aa15.74■□□□□ 0.11
NCAPD2-207ENST00000539084 TSPY10P0CW01 314 aa15.74■□□□□ 0.11
NCAPD2-207ENST00000539084 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
NCAPD2-207ENST00000539084 MRC2Q9UBG0 1479 aa15.73■□□□□ 0.11
NCAPD2-207ENST00000539084 KCNH8Q96L42 1107 aa15.72■□□□□ 0.11
NCAPD2-207ENST00000539084 FGD5Q6ZNL6 1462 aa15.72■□□□□ 0.11
NCAPD2-207ENST00000539084 RAPGEF2Q9Y4G8 1499 aa15.7■□□□□ 0.1
NCAPD2-207ENST00000539084 NESP48681 1621 aa15.68■□□□□ 0.1
NCAPD2-207ENST00000539084 PEG3Q9GZU2 1588 aa15.68■□□□□ 0.1
NCAPD2-207ENST00000539084 LAMC3Q9Y6N6 1575 aa15.67■□□□□ 0.1
NCAPD2-207ENST00000539084 GAPVD1Q14C86 1478 aa15.66■□□□□ 0.1
NCAPD2-207ENST00000539084 OSCARQ8IYS5 282 aa15.65■□□□□ 0.1
NCAPD2-207ENST00000539084 IFT140Q96RY7 1462 aa15.61■□□□□ 0.09
NCAPD2-207ENST00000539084 JPH4Q96JJ6 628 aa15.6■□□□□ 0.09
NCAPD2-207ENST00000539084 ACIN1Q9UKV3 1341 aaKnown RBP15.6■□□□□ 0.09
NCAPD2-207ENST00000539084 CFDP1Q9UEE9 299 aaPredicted RBP15.6■□□□□ 0.09
NCAPD2-207ENST00000539084 FMN1Q68DA7 1419 aa15.6■□□□□ 0.09
NCAPD2-207ENST00000539084 POLR3GLQ9BT43 218 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms