RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
SNX25-203ENST00000504959 CHIC1Q5VXU3 224 aa18.16■□□□□ 0.5
SNX25-203ENST00000504959 SENP3Q9H4L4 574 aaPredicted RBP16.28■□□□□ 0.2
SNX25-203ENST00000504959 PHF23Q9BUL5 403 aaPredicted RBP16.07■□□□□ 0.16
SNX25-203ENST00000504959 FOXD1Q16676 465 aa15.17■□□□□ 0.02
SNX25-203ENST00000504959 PLPPR3Q6T4P5 718 aa14.5□□□□□ -0.09
SNX25-203ENST00000504959 PPP6R1Q9UPN7 881 aa14.2□□□□□ -0.14
SNX25-203ENST00000504959 MSH5O43196 834 aa14.19□□□□□ -0.14
SNX25-203ENST00000504959 PIAS4Q8N2W9 510 aaPredicted RBP14.16□□□□□ -0.14
SNX25-203ENST00000504959 ADRA2BP18089 450 aa14.14□□□□□ -0.15
SNX25-203ENST00000504959 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
SNX25-203ENST00000504959 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.29
SNX25-203ENST00000504959 KCNA4P22459 653 aa13.16□□□□□ -0.3
SNX25-203ENST00000504959 MAPK8IP2Q13387 824 aaPredicted RBP12.99□□□□□ -0.33
SNX25-203ENST00000504959 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
SNX25-203ENST00000504959 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
SNX25-203ENST00000504959 PPP4R3CPQ6ZMV5 832 aa12.72□□□□□ -0.37
SNX25-203ENST00000504959 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
SNX25-203ENST00000504959 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
SNX25-203ENST00000504959 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
SNX25-203ENST00000504959 HOXD11P31277 338 aaPredicted RBP12.46□□□□□ -0.42
SNX25-203ENST00000504959 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
SNX25-203ENST00000504959 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
SNX25-203ENST00000504959 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
SNX25-203ENST00000504959 NPM3O75607 178 aaKnown RBP12.27□□□□□ -0.45
SNX25-203ENST00000504959 ZBTB22O15209 634 aa12.17□□□□□ -0.46
SNX25-203ENST00000504959 CACNB1Q02641 598 aaPredicted RBP12.15□□□□□ -0.46
SNX25-203ENST00000504959 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
SNX25-203ENST00000504959 DNAJC5BQ9UF47 199 aa12.04□□□□□ -0.48
SNX25-203ENST00000504959 C1QBPQ07021 282 aaKnown RBP11.93□□□□□ -0.5
SNX25-203ENST00000504959 NISCHQ9Y2I1 1504 aa11.88□□□□□ -0.51
SNX25-203ENST00000504959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNX25-203ENST00000504959 SLC24A1O60721 1099 aa11.82□□□□□ -0.52
SNX25-203ENST00000504959 FOXD4L1Q9NU39 408 aa11.81□□□□□ -0.52
SNX25-203ENST00000504959 RTN4Q9NQC3 1192 aaKnown RBP11.78□□□□□ -0.52
SNX25-203ENST00000504959 AMER1Q5JTC6 1135 aaPredicted RBP11.64□□□□□ -0.55
SNX25-203ENST00000504959 U3KPZ7 1027 aaPredicted RBP11.61□□□□□ -0.55
SNX25-203ENST00000504959 SLC4A2P04920 1241 aa11.52□□□□□ -0.57
SNX25-203ENST00000504959 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
SNX25-203ENST00000504959 CAPN15O75808 1086 aa11.4□□□□□ -0.59
SNX25-203ENST00000504959 FKBP8Q14318 412 aa11.39□□□□□ -0.59
SNX25-203ENST00000504959 DSG3P32926 999 aa11.34□□□□□ -0.59
SNX25-203ENST00000504959 APLP2Q06481 763 aa11.29□□□□□ -0.6
SNX25-203ENST00000504959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.28□□□□□ -0.6
SNX25-203ENST00000504959 HNRNPUL2Q1KMD3 747 aaKnown RBP11.28□□□□□ -0.6
SNX25-203ENST00000504959 ATXN8OSP0DMR3 200 aa11.27□□□□□ -0.61
SNX25-203ENST00000504959 MYCNP04198 464 aaPredicted RBP11.24□□□□□ -0.61
SNX25-203ENST00000504959 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
SNX25-203ENST00000504959 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
SNX25-203ENST00000504959 ZNF219Q9P2Y4 722 aaPredicted RBP11.21□□□□□ -0.61
SNX25-203ENST00000504959 ABCB7O75027 752 aa11.13□□□□□ -0.63
SNX25-203ENST00000504959 ATF5Q9Y2D1 282 aaPredicted RBP11.02□□□□□ -0.64
SNX25-203ENST00000504959 POLA2Q14181 598 aa10.93□□□□□ -0.66
SNX25-203ENST00000504959 RBM42Q9BTD8 480 aaKnown RBP10.83□□□□□ -0.68
SNX25-203ENST00000504959 POTEHQ6S545 545 aa10.82□□□□□ -0.68
SNX25-203ENST00000504959 PLCB2Q00722 1185 aa10.76□□□□□ -0.69
SNX25-203ENST00000504959 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
SNX25-203ENST00000504959 FBXO3Q9UK99 471 aa10.67□□□□□ -0.7
SNX25-203ENST00000504959 SPDYE4A6NLX3 237 aa10.62□□□□□ -0.71
SNX25-203ENST00000504959 HAP1P54257 671 aaPredicted RBP10.61□□□□□ -0.71
SNX25-203ENST00000504959 AKT1S1Q96B36 256 aa10.59□□□□□ -0.71
SNX25-203ENST00000504959 VASPP50552 380 aaPredicted RBP10.58□□□□□ -0.72
SNX25-203ENST00000504959 CHRDL2Q6WN34 429 aa10.57□□□□□ -0.72
SNX25-203ENST00000504959 OSCARQ8IYS5 282 aa10.57□□□□□ -0.72
SNX25-203ENST00000504959 DCAF8L2P0C7V8 631 aa10.56□□□□□ -0.72
SNX25-203ENST00000504959 PRKCSHP14314 528 aaPredicted RBP10.55□□□□□ -0.72
SNX25-203ENST00000504959 MKRN4PQ13434 485 aaPredicted RBP10.55□□□□□ -0.72
SNX25-203ENST00000504959 PROM2Q8N271 834 aa10.55□□□□□ -0.72
SNX25-203ENST00000504959 IFNLR1Q8IU57 520 aaPredicted RBP10.55□□□□□ -0.72
SNX25-203ENST00000504959 BCANQ96GW7 911 aa10.51□□□□□ -0.73
SNX25-203ENST00000504959 PKD2Q13563 968 aa10.49□□□□□ -0.73
SNX25-203ENST00000504959 REM2Q8IYK8 340 aaPredicted RBP10.48□□□□□ -0.73
SNX25-203ENST00000504959 FBLN2P98095 1184 aa10.46□□□□□ -0.74
SNX25-203ENST00000504959 TAOK2Q9UL54 1235 aa10.44□□□□□ -0.74
SNX25-203ENST00000504959 VSIG10Q8N0Z9 540 aa10.42□□□□□ -0.74
SNX25-203ENST00000504959 SPDYE2BA6NHP3 402 aa10.4□□□□□ -0.75
SNX25-203ENST00000504959 SPDYE6P0CI01 402 aa10.4□□□□□ -0.75
SNX25-203ENST00000504959 SPDYE2Q495Y8 402 aa10.4□□□□□ -0.75
SNX25-203ENST00000504959 PITPNM1O00562 1244 aa10.36□□□□□ -0.75
SNX25-203ENST00000504959 KDM2AQ9Y2K7 1162 aa10.35□□□□□ -0.75
SNX25-203ENST00000504959 PIP4P2Q8N4L2 257 aa10.33□□□□□ -0.76
SNX25-203ENST00000504959 NPM1P06748 294 aaKnown RBP eCLIP10.3□□□□□ -0.76
SNX25-203ENST00000504959 TPRNQ4KMQ1 711 aa10.29□□□□□ -0.76
SNX25-203ENST00000504959 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.764e-11■■■■■ 46.9
SNX25-203ENST00000504959 BBXQ8WY36 941 aaPredicted RBP10.27□□□□□ -0.77
SNX25-203ENST00000504959 SSUH2Q9Y2M2 353 aa10.27□□□□□ -0.77
SNX25-203ENST00000504959 CCDC180Q9P1Z9 1646 aa10.26□□□□□ -0.77
SNX25-203ENST00000504959 PAXIP1Q6ZW49 1069 aaPredicted RBP10.25□□□□□ -0.77
SNX25-203ENST00000504959 ZNF692Q9BU19 519 aaPredicted RBP10.25□□□□□ -0.77
SNX25-203ENST00000504959 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
SNX25-203ENST00000504959 CFAP44Q96MT7 982 aa10.23□□□□□ -0.77
SNX25-203ENST00000504959 ECM2O94769 699 aaPredicted RBP10.23□□□□□ -0.77
SNX25-203ENST00000504959 SPDYE1Q8NFV5 336 aaPredicted RBP10.21□□□□□ -0.78
SNX25-203ENST00000504959 SPOCK2Q92563 424 aa10.21□□□□□ -0.78
SNX25-203ENST00000504959 KLHL34Q8N239 644 aa10.2□□□□□ -0.78
SNX25-203ENST00000504959 RGL2O15211 777 aa10.17□□□□□ -0.78
SNX25-203ENST00000504959 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
SNX25-203ENST00000504959 SP7Q8TDD2 431 aaPredicted RBP10.16□□□□□ -0.78
SNX25-203ENST00000504959 TSHZ2Q9NRE2 1034 aa10.14□□□□□ -0.79
SNX25-203ENST00000504959 HAX1O00165 279 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms