RNA–Protein interactions for RNA: ENST00000476555.5

GMNN-206, Transcript of geminin, DNA replication inhibitor, humanhuman

TSL 3

Gene GMNN, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMNN-206ENST00000476555 NISCHQ9Y2I1 1504 aa36.96■■■■□ 3.51
GMNN-206ENST00000476555 CCDC180Q9P1Z9 1646 aa33■■■□□ 2.87
GMNN-206ENST00000476555 ABCC9O60706 1549 aa32.37■■■□□ 2.77
GMNN-206ENST00000476555 RB1CC1Q8TDY2 1594 aa31.08■■■□□ 2.57
GMNN-206ENST00000476555 NACADO15069 1562 aa31.01■■■□□ 2.56
GMNN-206ENST00000476555 MYO15BQ96JP2 1530 aa30.81■■■□□ 2.52
GMNN-206ENST00000476555 ZCCHC6Q5VYS8 1495 aaKnown RBP30.76■■■□□ 2.52
GMNN-206ENST00000476555 DCAF8L2P0C7V8 631 aa30.74■■■□□ 2.51
GMNN-206ENST00000476555 DCAF1Q9Y4B6 1507 aa30.61■■■□□ 2.49
GMNN-206ENST00000476555 UNC13AQ9UPW8 1703 aa30.56■■■□□ 2.48
GMNN-206ENST00000476555 BICRAQ9NZM4 1560 aa30.27■■■□□ 2.44
GMNN-206ENST00000476555 PABPN1Q86U42 306 aaKnown RBP eCLIP30.18■■■□□ 2.42
GMNN-206ENST00000476555 SCRIBQ14160 1630 aa30.03■■■□□ 2.4
GMNN-206ENST00000476555 DNAJC5BQ9UF47 199 aa29.97■■■□□ 2.39
GMNN-206ENST00000476555 SHROOM4Q9ULL8 1493 aa29.83■■■□□ 2.37
GMNN-206ENST00000476555 EIF4G1Q04637 1599 aaKnown RBP29.4■■■□□ 2.3
GMNN-206ENST00000476555 CC2D2AQ9P2K1 1620 aa29.34■■■□□ 2.29
GMNN-206ENST00000476555 CECR2Q9BXF3 1484 aa29.1■■■□□ 2.25
GMNN-206ENST00000476555 SMARCA4P51532 1647 aa28.75■■■□□ 2.19
GMNN-206ENST00000476555 BAZ1AQ9NRL2 1556 aaPredicted RBP28.63■■■□□ 2.17
GMNN-206ENST00000476555 NCAPD3P42695 1498 aa28.63■■■□□ 2.17
GMNN-206ENST00000476555 ATAD2BQ9ULI0 1458 aa28.61■■■□□ 2.17
GMNN-206ENST00000476555 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
GMNN-206ENST00000476555 PEG3Q9GZU2 1588 aa28.51■■■□□ 2.15
GMNN-206ENST00000476555 MROH2BQ7Z745 1585 aa28.5■■■□□ 2.15
GMNN-206ENST00000476555 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
GMNN-206ENST00000476555 BAZ1BQ9UIG0 1483 aaKnown RBP28.31■■■□□ 2.12
GMNN-206ENST00000476555 WIZO95785 1651 aa28.2■■■□□ 2.11
GMNN-206ENST00000476555 RSF1Q96T23 1441 aaPredicted RBP28.08■■■□□ 2.09
GMNN-206ENST00000476555 NESP48681 1621 aa28.01■■■□□ 2.07
GMNN-206ENST00000476555 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
GMNN-206ENST00000476555 TOP2AP11388 1531 aaKnown RBP27.85■■■□□ 2.05
GMNN-206ENST00000476555 ERCC6Q03468 1493 aa27.83■■■□□ 2.05
GMNN-206ENST00000476555 CADPSQ9ULU8 1353 aa27.73■■■□□ 2.03
GMNN-206ENST00000476555 KIF21AQ7Z4S6 1674 aa27.73■■■□□ 2.03
GMNN-206ENST00000476555 CUX2O14529 1486 aa27.7■■■□□ 2.03
GMNN-206ENST00000476555 THOC2Q8NI27 1593 aaKnown RBP27.68■■■□□ 2.02
GMNN-206ENST00000476555 PDS5BQ9NTI5 1447 aa27.63■■■□□ 2.01
GMNN-206ENST00000476555 CFTRP13569 1480 aa27.57■■■□□ 2
GMNN-206ENST00000476555 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
GMNN-206ENST00000476555 PRDM2Q13029 1718 aa27.46■■□□□ 1.99
GMNN-206ENST00000476555 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
GMNN-206ENST00000476555 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
GMNN-206ENST00000476555 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
GMNN-206ENST00000476555 WDR62O43379 1518 aa27.38■■□□□ 1.97
GMNN-206ENST00000476555 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
GMNN-206ENST00000476555 DNAJC5Q9H3Z4 198 aa27.08■■□□□ 1.93
GMNN-206ENST00000476555 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
GMNN-206ENST00000476555 TOPBP1Q92547 1522 aa27■■□□□ 1.91
GMNN-206ENST00000476555 DNMBPQ6XZF7 1577 aa26.95■■□□□ 1.9
GMNN-206ENST00000476555 ABCC8Q09428 1581 aa26.92■■□□□ 1.9
GMNN-206ENST00000476555 IFT140Q96RY7 1462 aa26.83■■□□□ 1.89
GMNN-206ENST00000476555 ZNF608Q9ULD9 1512 aaPredicted RBP26.79■■□□□ 1.88
GMNN-206ENST00000476555 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
GMNN-206ENST00000476555 POLA1P09884 1462 aaPredicted RBP26.75■■□□□ 1.87
GMNN-206ENST00000476555 CUX1P39880 1505 aa26.75■■□□□ 1.87
GMNN-206ENST00000476555 EIF4G3O43432 1585 aaKnown RBP26.67■■□□□ 1.86
GMNN-206ENST00000476555 FGD5Q6ZNL6 1462 aa26.64■■□□□ 1.86
GMNN-206ENST00000476555 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
GMNN-206ENST00000476555 SOGA1O94964 1423 aa26.58■■□□□ 1.85
GMNN-206ENST00000476555 AQRO60306 1485 aaKnown RBP eCLIP26.57■■□□□ 1.843e-6■□□□□ 8.3
GMNN-206ENST00000476555 WDR97A6NE52 1622 aa26.55■■□□□ 1.84
GMNN-206ENST00000476555 BIVM-ERCC5R4GMW8 1640 aa26.5■■□□□ 1.83
GMNN-206ENST00000476555 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
GMNN-206ENST00000476555 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
GMNN-206ENST00000476555 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
GMNN-206ENST00000476555 OSCARQ8IYS5 282 aa26.44■■□□□ 1.82
GMNN-206ENST00000476555 CHD1O14646 1710 aa26.42■■□□□ 1.82
GMNN-206ENST00000476555 WRNQ14191 1432 aaPredicted RBP eCLIP26.42■■□□□ 1.82
GMNN-206ENST00000476555 ABCA10Q8WWZ4 1543 aa26.39■■□□□ 1.82
GMNN-206ENST00000476555 ABCA5Q8WWZ7 1642 aa26.36■■□□□ 1.81
GMNN-206ENST00000476555 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
GMNN-206ENST00000476555 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
GMNN-206ENST00000476555 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
GMNN-206ENST00000476555 GAPVD1Q14C86 1478 aa26.29■■□□□ 1.8
GMNN-206ENST00000476555 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
GMNN-206ENST00000476555 RIMBP3CA6NJZ7 1639 aa26.17■■□□□ 1.78
GMNN-206ENST00000476555 RIMBP3BA6NNM3 1639 aa26.17■■□□□ 1.78
GMNN-206ENST00000476555 RIMBP3Q9UFD9 1639 aa26.17■■□□□ 1.78
GMNN-206ENST00000476555 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
GMNN-206ENST00000476555 FBLN2P98095 1184 aa26.14■■□□□ 1.78
GMNN-206ENST00000476555 CLASP1Q7Z460 1538 aa26.12■■□□□ 1.77
GMNN-206ENST00000476555 ARHGEF11O15085 1522 aa26.11■■□□□ 1.77
GMNN-206ENST00000476555 ADAMTS12P58397 1594 aa26.09■■□□□ 1.77
GMNN-206ENST00000476555 CHMP7Q8WUX9 453 aaPredicted RBP26.07■■□□□ 1.76
GMNN-206ENST00000476555 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
GMNN-206ENST00000476555 GRIN2AQ12879 1464 aa25.99■■□□□ 1.75
GMNN-206ENST00000476555 TRIM41Q8WV44 630 aa25.98■■□□□ 1.75
GMNN-206ENST00000476555 FHAD1B1AJZ9 1412 aa25.97■■□□□ 1.75
GMNN-206ENST00000476555 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
GMNN-206ENST00000476555 NUP160Q12769 1436 aa25.92■■□□□ 1.74
GMNN-206ENST00000476555 ARAP1Q96P48 1450 aa25.91■■□□□ 1.74
GMNN-206ENST00000476555 KIF27Q86VH2 1401 aa25.85■■□□□ 1.73
GMNN-206ENST00000476555 IGF1RP08069 1367 aa25.84■■□□□ 1.73
GMNN-206ENST00000476555 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
GMNN-206ENST00000476555 CUL7Q14999 1698 aa25.8■■□□□ 1.72
GMNN-206ENST00000476555 CYB5RLQ6IPT4 315 aa25.77■■□□□ 1.72
GMNN-206ENST00000476555 ERCC6L2Q5T890 1561 aa25.75■■□□□ 1.71
GMNN-206ENST00000476555 RUSC2Q8N2Y8 1516 aa25.72■■□□□ 1.71
GMNN-206ENST00000476555 CARMIL1Q5VZK9 1371 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms