RNA–Protein interactions for RNA: ENST00000557240.5

PSMC6-214, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 5

Gene PSMC6, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-214ENST00000557240 AEBP2Q6ZN18 517 aaPredicted RBP22.21■■□□□ 1.15
PSMC6-214ENST00000557240 CHIC1Q5VXU3 224 aa21.46■■□□□ 1.03
PSMC6-214ENST00000557240 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
PSMC6-214ENST00000557240 PHF23Q9BUL5 403 aaPredicted RBP18.8■□□□□ 0.6
PSMC6-214ENST00000557240 FOXD1Q16676 465 aa17.59■□□□□ 0.41
PSMC6-214ENST00000557240 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
PSMC6-214ENST00000557240 ADRA2BP18089 450 aa16.68■□□□□ 0.26
PSMC6-214ENST00000557240 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
PSMC6-214ENST00000557240 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
PSMC6-214ENST00000557240 MSH5O43196 834 aa16.39■□□□□ 0.21
PSMC6-214ENST00000557240 POTEDQ86YR6 584 aa15.36■□□□□ 0.05
PSMC6-214ENST00000557240 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
PSMC6-214ENST00000557240 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
PSMC6-214ENST00000557240 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
PSMC6-214ENST00000557240 DMRT2Q9Y5R5 561 aa15.07■□□□□ 0
PSMC6-214ENST00000557240 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
PSMC6-214ENST00000557240 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
PSMC6-214ENST00000557240 RNF216Q9NWF9 866 aaPredicted RBP14.64□□□□□ -0.07
PSMC6-214ENST00000557240 HOXD11P31277 338 aaPredicted RBP14.62□□□□□ -0.07
PSMC6-214ENST00000557240 KCNA4P22459 653 aa14.56□□□□□ -0.08
PSMC6-214ENST00000557240 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
PSMC6-214ENST00000557240 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
PSMC6-214ENST00000557240 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
PSMC6-214ENST00000557240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
PSMC6-214ENST00000557240 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
PSMC6-214ENST00000557240 CACNB1Q02641 598 aaPredicted RBP13.86□□□□□ -0.19
PSMC6-214ENST00000557240 SLC4A1APQ9BWU0 796 aaKnown RBP13.85□□□□□ -0.19
PSMC6-214ENST00000557240 C1QBPQ07021 282 aaKnown RBP13.81□□□□□ -0.2
PSMC6-214ENST00000557240 SLC4A2P04920 1241 aa13.75□□□□□ -0.21
PSMC6-214ENST00000557240 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
PSMC6-214ENST00000557240 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
PSMC6-214ENST00000557240 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
PSMC6-214ENST00000557240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.5□□□□□ -0.25
PSMC6-214ENST00000557240 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
PSMC6-214ENST00000557240 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
PSMC6-214ENST00000557240 APLP2Q06481 763 aa13.45□□□□□ -0.26
PSMC6-214ENST00000557240 CAPN15O75808 1086 aa13.43□□□□□ -0.26
PSMC6-214ENST00000557240 SAMD1Q6SPF0 538 aaPredicted RBP13.43□□□□□ -0.26
PSMC6-214ENST00000557240 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
PSMC6-214ENST00000557240 ZBTB22O15209 634 aa13.37□□□□□ -0.27
PSMC6-214ENST00000557240 TRHP20396 242 aaPredicted RBP13.29□□□□□ -0.28
PSMC6-214ENST00000557240 ZNF219Q9P2Y4 722 aaPredicted RBP13.28□□□□□ -0.28
PSMC6-214ENST00000557240 DSG3P32926 999 aa13.2□□□□□ -0.3
PSMC6-214ENST00000557240 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
PSMC6-214ENST00000557240 ABCB7O75027 752 aa13.14□□□□□ -0.31
PSMC6-214ENST00000557240 ATF5Q9Y2D1 282 aaPredicted RBP13.06□□□□□ -0.32
PSMC6-214ENST00000557240 ATXN8OSP0DMR3 200 aa13.03□□□□□ -0.32
PSMC6-214ENST00000557240 POLA2Q14181 598 aa12.97□□□□□ -0.33
PSMC6-214ENST00000557240 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
PSMC6-214ENST00000557240 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
PSMC6-214ENST00000557240 FBLN2P98095 1184 aa12.64□□□□□ -0.39
PSMC6-214ENST00000557240 OSCARQ8IYS5 282 aa12.59□□□□□ -0.39
PSMC6-214ENST00000557240 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
PSMC6-214ENST00000557240 AKT1S1Q96B36 256 aa12.4□□□□□ -0.42
PSMC6-214ENST00000557240 SPDYE2BA6NHP3 402 aa12.39□□□□□ -0.43
PSMC6-214ENST00000557240 SPDYE6P0CI01 402 aa12.39□□□□□ -0.43
PSMC6-214ENST00000557240 SPDYE2Q495Y8 402 aa12.39□□□□□ -0.43
PSMC6-214ENST00000557240 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
PSMC6-214ENST00000557240 REM2Q8IYK8 340 aaPredicted RBP12.27□□□□□ -0.45
PSMC6-214ENST00000557240 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
PSMC6-214ENST00000557240 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
PSMC6-214ENST00000557240 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.45
PSMC6-214ENST00000557240 AMER1Q5JTC6 1135 aaPredicted RBP12.18□□□□□ -0.46
PSMC6-214ENST00000557240 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
PSMC6-214ENST00000557240 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
PSMC6-214ENST00000557240 POTEHQ6S545 545 aa12.14□□□□□ -0.47
PSMC6-214ENST00000557240 PABPN1Q86U42 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
PSMC6-214ENST00000557240 SPDYE1Q8NFV5 336 aaPredicted RBP12.11□□□□□ -0.47
PSMC6-214ENST00000557240 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
PSMC6-214ENST00000557240 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
PSMC6-214ENST00000557240 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
PSMC6-214ENST00000557240 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.5
PSMC6-214ENST00000557240 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
PSMC6-214ENST00000557240 FKBP8Q14318 412 aa11.9□□□□□ -0.5
PSMC6-214ENST00000557240 STAG3Q9UJ98 1225 aa11.88□□□□□ -0.51
PSMC6-214ENST00000557240 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
PSMC6-214ENST00000557240 PROM2Q8N271 834 aa11.82□□□□□ -0.52
PSMC6-214ENST00000557240 CHADLQ6NUI6 762 aa11.78□□□□□ -0.52
PSMC6-214ENST00000557240 HAX1O00165 279 aa11.7□□□□□ -0.54
PSMC6-214ENST00000557240 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
PSMC6-214ENST00000557240 FARP1Q9Y4F1 1045 aaPredicted RBP11.64□□□□□ -0.55
PSMC6-214ENST00000557240 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
PSMC6-214ENST00000557240 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
PSMC6-214ENST00000557240 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
PSMC6-214ENST00000557240 MIER1Q8N108 512 aa11.54□□□□□ -0.56
PSMC6-214ENST00000557240 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
PSMC6-214ENST00000557240 PLCD3Q8N3E9 789 aa11.53□□□□□ -0.56
PSMC6-214ENST00000557240 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.57
PSMC6-214ENST00000557240 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
PSMC6-214ENST00000557240 EVX2Q03828 476 aa11.49□□□□□ -0.57
PSMC6-214ENST00000557240 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.57
PSMC6-214ENST00000557240 PAK3O75914 559 aaPredicted RBP11.44□□□□□ -0.58
PSMC6-214ENST00000557240 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
PSMC6-214ENST00000557240 VASPP50552 380 aaPredicted RBP11.4□□□□□ -0.58
PSMC6-214ENST00000557240 ZRANB1Q9UGI0 708 aa11.4□□□□□ -0.58
PSMC6-214ENST00000557240 ZNF579Q8NAF0 562 aaKnown RBP11.33□□□□□ -0.6
PSMC6-214ENST00000557240 TSPYL2Q9H2G4 693 aaPredicted RBP11.32□□□□□ -0.6
PSMC6-214ENST00000557240 NISCHQ9Y2I1 1504 aa11.3□□□□□ -0.6
PSMC6-214ENST00000557240 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
PSMC6-214ENST00000557240 GABBR2O75899 941 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms