RNA–Protein interactions for RNA: ENST00000315579.9

NCAPD2-201, Transcript of non-SMC condensin I complex subunit D2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCAPD2, Length 5,548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-201ENST00000315579 NISCHQ9Y2I1 1504 aa30.11■■■□□ 2.41
NCAPD2-201ENST00000315579 DCAF8L2P0C7V8 631 aa28.91■■■□□ 2.22
NCAPD2-201ENST00000315579 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
NCAPD2-201ENST00000315579 SHROOM4Q9ULL8 1493 aa28.22■■■□□ 2.11
NCAPD2-201ENST00000315579 EHMT2Q96KQ7 1210 aa27.01■■□□□ 1.91
NCAPD2-201ENST00000315579 PCGF6Q9BYE7 350 aa26.83■■□□□ 1.89
NCAPD2-201ENST00000315579 FAM9AQ8IZU1 332 aaPredicted RBP26.57■■□□□ 1.84
NCAPD2-201ENST00000315579 TRIM41Q8WV44 630 aa26.24■■□□□ 1.79
NCAPD2-201ENST00000315579 TTBK1Q5TCY1 1321 aaPredicted RBP26.16■■□□□ 1.78
NCAPD2-201ENST00000315579 ZEB1P37275 1124 aaPredicted RBP26.07■■□□□ 1.76
NCAPD2-201ENST00000315579 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
NCAPD2-201ENST00000315579 HRCP23327 699 aa26.01■■□□□ 1.75
NCAPD2-201ENST00000315579 APLP2Q06481 763 aa25.98■■□□□ 1.75
NCAPD2-201ENST00000315579 CCER1Q8TC90 406 aaPredicted RBP25.84■■□□□ 1.73
NCAPD2-201ENST00000315579 LOC105371045A0A1W2PR82 267 aa25.84■■□□□ 1.73
NCAPD2-201ENST00000315579 TRIM26Q12899 539 aaPredicted RBP25.83■■□□□ 1.73
NCAPD2-201ENST00000315579 PPARGC1BQ86YN6 1023 aaKnown RBP25.7■■□□□ 1.7
NCAPD2-201ENST00000315579 RANGAP1P46060 587 aaPredicted RBP25.65■■□□□ 1.7
NCAPD2-201ENST00000315579 PELP1Q8IZL8 1130 aaKnown RBP25.65■■□□□ 1.7
NCAPD2-201ENST00000315579 CENPBP07199 599 aaPredicted RBP25.61■■□□□ 1.69
NCAPD2-201ENST00000315579 UBTFP17480 764 aaKnown RBP25.58■■□□□ 1.68
NCAPD2-201ENST00000315579 YTHDC1Q96MU7 727 aaKnown RBP25.28■■□□□ 1.64
NCAPD2-201ENST00000315579 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
NCAPD2-201ENST00000315579 ATP1B4Q9UN42 357 aaPredicted RBP25.08■■□□□ 1.61
NCAPD2-201ENST00000315579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.02■■□□□ 1.6
NCAPD2-201ENST00000315579 HNRNPUL2Q1KMD3 747 aaKnown RBP24.9■■□□□ 1.58
NCAPD2-201ENST00000315579 ABCC9O60706 1549 aa24.9■■□□□ 1.58
NCAPD2-201ENST00000315579 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
NCAPD2-201ENST00000315579 DIEXFQ68CQ4 756 aaKnown RBP24.78■■□□□ 1.56
NCAPD2-201ENST00000315579 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
NCAPD2-201ENST00000315579 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
NCAPD2-201ENST00000315579 ITGAEP38570 1179 aa24.72■■□□□ 1.55
NCAPD2-201ENST00000315579 ERICH6Q7L0X2 663 aa24.7■■□□□ 1.54
NCAPD2-201ENST00000315579 SCRIBQ14160 1630 aa24.68■■□□□ 1.54
NCAPD2-201ENST00000315579 NEFLP07196 543 aa24.64■■□□□ 1.54
NCAPD2-201ENST00000315579 MYT1Q01538 1121 aa24.6■■□□□ 1.53
NCAPD2-201ENST00000315579 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.52
NCAPD2-201ENST00000315579 GTF3C3Q9Y5Q9 886 aa24.4■■□□□ 1.5
NCAPD2-201ENST00000315579 ZNF316A6NFI3 1004 aaPredicted RBP24.29■■□□□ 1.48
NCAPD2-201ENST00000315579 CSRNP3Q8WYN3 585 aa24.27■■□□□ 1.48
NCAPD2-201ENST00000315579 ACIN1Q9UKV3 1341 aaKnown RBP24.25■■□□□ 1.47
NCAPD2-201ENST00000315579 FAM50AQ14320 339 aaKnown RBP24.18■■□□□ 1.46
NCAPD2-201ENST00000315579 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
NCAPD2-201ENST00000315579 NEUROD1Q13562 356 aa24.08■■□□□ 1.45
NCAPD2-201ENST00000315579 POLR3GLQ9BT43 218 aa24.06■■□□□ 1.44
NCAPD2-201ENST00000315579 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.43
NCAPD2-201ENST00000315579 BCANQ96GW7 911 aa23.91■■□□□ 1.42
NCAPD2-201ENST00000315579 SCAF1Q9H7N4 1312 aaKnown RBP23.91■■□□□ 1.42
NCAPD2-201ENST00000315579 RB1CC1Q8TDY2 1594 aa23.83■■□□□ 1.41
NCAPD2-201ENST00000315579 TRIM52Q96A61 297 aa23.83■■□□□ 1.4
NCAPD2-201ENST00000315579 P3H3Q8IVL6 736 aa23.79■■□□□ 1.4
NCAPD2-201ENST00000315579 ANP32CO43423 234 aa23.78■■□□□ 1.4
NCAPD2-201ENST00000315579 CEP162Q5TB80 1403 aa23.75■■□□□ 1.39
NCAPD2-201ENST00000315579 NACADO15069 1562 aa23.7■■□□□ 1.38
NCAPD2-201ENST00000315579 CLIP1P30622 1438 aa23.65■■□□□ 1.38
NCAPD2-201ENST00000315579 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.37
NCAPD2-201ENST00000315579 GOLGA3Q08378 1498 aa23.63■■□□□ 1.37
NCAPD2-201ENST00000315579 MIER1Q8N108 512 aa23.61■■□□□ 1.37
NCAPD2-201ENST00000315579 EEA1Q15075 1411 aa23.58■■□□□ 1.37
NCAPD2-201ENST00000315579 TNIKQ9UKE5 1360 aa23.54■■□□□ 1.36
NCAPD2-201ENST00000315579 DAXXQ9UER7 740 aaPredicted RBP23.54■■□□□ 1.36
NCAPD2-201ENST00000315579 MYT1LQ9UL68 1186 aa23.53■■□□□ 1.36
NCAPD2-201ENST00000315579 ZNF326Q5BKZ1 582 aaKnown RBP23.49■■□□□ 1.35
NCAPD2-201ENST00000315579 WRNQ14191 1432 aaPredicted RBP eCLIP23.49■■□□□ 1.35
NCAPD2-201ENST00000315579 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
NCAPD2-201ENST00000315579 ARID3CA6NKF2 412 aa23.46■■□□□ 1.35
NCAPD2-201ENST00000315579 CLSPNQ9HAW4 1339 aa23.46■■□□□ 1.35
NCAPD2-201ENST00000315579 CDK11AQ9UQ88 783 aaPredicted RBP23.46■■□□□ 1.35
NCAPD2-201ENST00000315579 DDX10Q13206 875 aaKnown RBP23.44■■□□□ 1.34
NCAPD2-201ENST00000315579 MROH2BQ7Z745 1585 aa23.44■■□□□ 1.34
NCAPD2-201ENST00000315579 FKBP8Q14318 412 aa23.42■■□□□ 1.34
NCAPD2-201ENST00000315579 TONSLQ96HA7 1378 aa23.39■■□□□ 1.33
NCAPD2-201ENST00000315579 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
NCAPD2-201ENST00000315579 SOGA1O94964 1423 aa23.37■■□□□ 1.33
NCAPD2-201ENST00000315579 RTL5Q5HYW3 569 aaPredicted RBP23.33■■□□□ 1.33
NCAPD2-201ENST00000315579 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
NCAPD2-201ENST00000315579 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
NCAPD2-201ENST00000315579 WIZO95785 1651 aa23.25■■□□□ 1.31
NCAPD2-201ENST00000315579 FBLN2P98095 1184 aa23.25■■□□□ 1.31
NCAPD2-201ENST00000315579 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
NCAPD2-201ENST00000315579 SLC4A1APQ9BWU0 796 aaKnown RBP23.22■■□□□ 1.31
NCAPD2-201ENST00000315579 HNRNPUQ00839 825 aaKnown RBP eCLIP23.22■■□□□ 1.31
NCAPD2-201ENST00000315579 HIRIP3Q9BW71 556 aaPredicted RBP23.21■■□□□ 1.31
NCAPD2-201ENST00000315579 ZNF777Q9ULD5 760 aaPredicted RBP23.19■■□□□ 1.3
NCAPD2-201ENST00000315579 CHIC2Q9UKJ5 165 aa23.17■■□□□ 1.3
NCAPD2-201ENST00000315579 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
NCAPD2-201ENST00000315579 FAM9BQ8IZU0 186 aa23.11■■□□□ 1.29
NCAPD2-201ENST00000315579 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
NCAPD2-201ENST00000315579 TOP2AP11388 1531 aaKnown RBP23.05■■□□□ 1.28
NCAPD2-201ENST00000315579 VPS8Q8N3P4 1428 aa23.01■■□□□ 1.27
NCAPD2-201ENST00000315579 IRX6P78412 446 aaPredicted RBP22.97■■□□□ 1.27
NCAPD2-201ENST00000315579 ANP32AP39687 249 aaKnown RBP22.97■■□□□ 1.27
NCAPD2-201ENST00000315579 RRP7BPQ9NSQ0 103 aa22.95■■□□□ 1.27
NCAPD2-201ENST00000315579 SIN3AQ96ST3 1273 aa22.94■■□□□ 1.26
NCAPD2-201ENST00000315579 CCNB3Q8WWL7 1395 aa22.93■■□□□ 1.26
NCAPD2-201ENST00000315579 MRS2Q9HD23 443 aa22.91■■□□□ 1.26
NCAPD2-201ENST00000315579 NPM2Q86SE8 214 aaKnown RBP22.9■■□□□ 1.26
NCAPD2-201ENST00000315579 SUPT16HQ9Y5B9 1047 aaKnown RBP22.88■■□□□ 1.25
NCAPD2-201ENST00000315579 KANK4Q5T7N3 995 aaPredicted RBP22.87■■□□□ 1.25
NCAPD2-201ENST00000315579 EIF4G2P78344 907 aaKnown RBP eCLIP22.86■■□□□ 1.251e-11■□□□□ 10
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms