RNA–Protein interactions for RNA: ENST00000482419.1

FAM208B-208, Transcript of family with sequence similarity 208 member B, humanhuman

TSL 2

Gene FAM208B, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208B-208ENST00000482419 AEBP2Q6ZN18 517 aaPredicted RBP23■■□□□ 1.27
FAM208B-208ENST00000482419 CHIC1Q5VXU3 224 aa21.66■■□□□ 1.06
FAM208B-208ENST00000482419 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
FAM208B-208ENST00000482419 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
FAM208B-208ENST00000482419 FOXD1Q16676 465 aa18.27■□□□□ 0.52
FAM208B-208ENST00000482419 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
FAM208B-208ENST00000482419 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
FAM208B-208ENST00000482419 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
FAM208B-208ENST00000482419 MSH5O43196 834 aa16.99■□□□□ 0.31
FAM208B-208ENST00000482419 ADRA2BP18089 450 aa16.96■□□□□ 0.31
FAM208B-208ENST00000482419 PIAS4Q8N2W9 510 aaPredicted RBP16.94■□□□□ 0.3
FAM208B-208ENST00000482419 MAPK8IP2Q13387 824 aaPredicted RBP15.64■□□□□ 0.09
FAM208B-208ENST00000482419 DMRT2Q9Y5R5 561 aa15.48■□□□□ 0.07
FAM208B-208ENST00000482419 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
FAM208B-208ENST00000482419 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
FAM208B-208ENST00000482419 HOXD11P31277 338 aaPredicted RBP14.91□□□□□ -0.02
FAM208B-208ENST00000482419 KCNA4P22459 653 aa14.86□□□□□ -0.03
FAM208B-208ENST00000482419 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
FAM208B-208ENST00000482419 CNKSR2Q8WXI2 1034 aa14.81□□□□□ -0.04
FAM208B-208ENST00000482419 RNF216Q9NWF9 866 aaPredicted RBP14.72□□□□□ -0.05
FAM208B-208ENST00000482419 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
FAM208B-208ENST00000482419 CACNB1Q02641 598 aaPredicted RBP14.7□□□□□ -0.06
FAM208B-208ENST00000482419 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
FAM208B-208ENST00000482419 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
FAM208B-208ENST00000482419 DNAJC5BQ9UF47 199 aa14.38□□□□□ -0.11
FAM208B-208ENST00000482419 C1QBPQ07021 282 aaKnown RBP14.31□□□□□ -0.12
FAM208B-208ENST00000482419 SLC4A1APQ9BWU0 796 aaKnown RBP14.15□□□□□ -0.14
FAM208B-208ENST00000482419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.07□□□□□ -0.16
FAM208B-208ENST00000482419 U3KPZ7 1027 aaPredicted RBP13.89□□□□□ -0.19
FAM208B-208ENST00000482419 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
FAM208B-208ENST00000482419 EHMT2Q96KQ7 1210 aa13.76□□□□□ -0.21
FAM208B-208ENST00000482419 SPINK5Q9NQ38 1064 aaPredicted RBP13.72□□□□□ -0.21
FAM208B-208ENST00000482419 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
FAM208B-208ENST00000482419 ZBTB22O15209 634 aa13.66□□□□□ -0.22
FAM208B-208ENST00000482419 DSG3P32926 999 aa13.63□□□□□ -0.23
FAM208B-208ENST00000482419 CSRNP3Q8WYN3 585 aa13.62□□□□□ -0.23
FAM208B-208ENST00000482419 CAPN15O75808 1086 aa13.58□□□□□ -0.24
FAM208B-208ENST00000482419 POTEHQ6S545 545 aa13.56□□□□□ -0.24
FAM208B-208ENST00000482419 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
FAM208B-208ENST00000482419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
FAM208B-208ENST00000482419 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
FAM208B-208ENST00000482419 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
FAM208B-208ENST00000482419 ABCB7O75027 752 aa13.31□□□□□ -0.28
FAM208B-208ENST00000482419 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
FAM208B-208ENST00000482419 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
FAM208B-208ENST00000482419 APLP2Q06481 763 aa13.27□□□□□ -0.29
FAM208B-208ENST00000482419 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
FAM208B-208ENST00000482419 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
FAM208B-208ENST00000482419 POLA2Q14181 598 aa13.04□□□□□ -0.32
FAM208B-208ENST00000482419 RBM42Q9BTD8 480 aaKnown RBP12.86□□□□□ -0.35
FAM208B-208ENST00000482419 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
FAM208B-208ENST00000482419 AKT1S1Q96B36 256 aa12.63□□□□□ -0.39
FAM208B-208ENST00000482419 ZBTB12Q9Y330 459 aaPredicted RBP12.63□□□□□ -0.39
FAM208B-208ENST00000482419 OSCARQ8IYS5 282 aa12.59□□□□□ -0.39
FAM208B-208ENST00000482419 FBLN2P98095 1184 aa12.57□□□□□ -0.4
FAM208B-208ENST00000482419 MKRN4PQ13434 485 aaPredicted RBP12.55□□□□□ -0.4
FAM208B-208ENST00000482419 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
FAM208B-208ENST00000482419 PIP4P2Q8N4L2 257 aa12.42□□□□□ -0.42
FAM208B-208ENST00000482419 PITPNM1O00562 1244 aa12.41□□□□□ -0.42
FAM208B-208ENST00000482419 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
FAM208B-208ENST00000482419 FXR2P51116 673 aaKnown RBP eCLIP12.35□□□□□ -0.43
FAM208B-208ENST00000482419 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
FAM208B-208ENST00000482419 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
FAM208B-208ENST00000482419 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
FAM208B-208ENST00000482419 FKBP8Q14318 412 aa12.3□□□□□ -0.44
FAM208B-208ENST00000482419 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
FAM208B-208ENST00000482419 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
FAM208B-208ENST00000482419 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
FAM208B-208ENST00000482419 EVX2Q03828 476 aa12.17□□□□□ -0.46
FAM208B-208ENST00000482419 HAX1O00165 279 aa12.15□□□□□ -0.46
FAM208B-208ENST00000482419 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
FAM208B-208ENST00000482419 PROM2Q8N271 834 aa12.08□□□□□ -0.48
FAM208B-208ENST00000482419 CLEC11AQ9Y240 323 aa12.08□□□□□ -0.48
FAM208B-208ENST00000482419 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
FAM208B-208ENST00000482419 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
FAM208B-208ENST00000482419 C19orf67A6NJJ6 358 aa11.95□□□□□ -0.5
FAM208B-208ENST00000482419 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
FAM208B-208ENST00000482419 STAG3Q9UJ98 1225 aa11.88□□□□□ -0.51
FAM208B-208ENST00000482419 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
FAM208B-208ENST00000482419 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
FAM208B-208ENST00000482419 GABBR2O75899 941 aa11.79□□□□□ -0.52
FAM208B-208ENST00000482419 FARP1Q9Y4F1 1045 aaPredicted RBP11.74□□□□□ -0.53
FAM208B-208ENST00000482419 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
FAM208B-208ENST00000482419 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
FAM208B-208ENST00000482419 MIER1Q8N108 512 aa11.65□□□□□ -0.54
FAM208B-208ENST00000482419 CD44P16070 742 aaKnown RBP11.64□□□□□ -0.55
FAM208B-208ENST00000482419 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
FAM208B-208ENST00000482419 PLCD3Q8N3E9 789 aa11.62□□□□□ -0.55
FAM208B-208ENST00000482419 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
FAM208B-208ENST00000482419 LHX8Q68G74 356 aa11.57□□□□□ -0.56
FAM208B-208ENST00000482419 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
FAM208B-208ENST00000482419 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
FAM208B-208ENST00000482419 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
FAM208B-208ENST00000482419 KLHL34Q8N239 644 aa11.5□□□□□ -0.57
FAM208B-208ENST00000482419 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
FAM208B-208ENST00000482419 CLCN6P51797 869 aa11.47□□□□□ -0.57
FAM208B-208ENST00000482419 ZRANB1Q9UGI0 708 aa11.47□□□□□ -0.57
FAM208B-208ENST00000482419 PLSCR2Q9NRY7 297 aa11.43□□□□□ -0.58
FAM208B-208ENST00000482419 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
FAM208B-208ENST00000482419 SPOCK2Q92563 424 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms