RNA–Protein interactions for RNA: ENST00000612399.4

PSMC6-219, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC6, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-219ENST00000612399 AEBP2Q6ZN18 517 aaPredicted RBP23.18■■□□□ 1.3
PSMC6-219ENST00000612399 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
PSMC6-219ENST00000612399 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
PSMC6-219ENST00000612399 PHF23Q9BUL5 403 aaPredicted RBP19.56■□□□□ 0.72
PSMC6-219ENST00000612399 FOXD1Q16676 465 aa18.52■□□□□ 0.56
PSMC6-219ENST00000612399 POTEDQ86YR6 584 aa18.33■□□□□ 0.52
PSMC6-219ENST00000612399 MSH5O43196 834 aa17.52■□□□□ 0.39
PSMC6-219ENST00000612399 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
PSMC6-219ENST00000612399 PIAS4Q8N2W9 510 aaPredicted RBP17.26■□□□□ 0.35
PSMC6-219ENST00000612399 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
PSMC6-219ENST00000612399 ADRA2BP18089 450 aa17.01■□□□□ 0.31
PSMC6-219ENST00000612399 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
PSMC6-219ENST00000612399 MAPK8IP2Q13387 824 aaPredicted RBP15.68■□□□□ 0.1
PSMC6-219ENST00000612399 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
PSMC6-219ENST00000612399 CACNB1Q02641 598 aaPredicted RBP15.17■□□□□ 0.02
PSMC6-219ENST00000612399 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
PSMC6-219ENST00000612399 DCAF8L1A6NGE4 600 aa15.07■□□□□ 0
PSMC6-219ENST00000612399 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
PSMC6-219ENST00000612399 CNKSR2Q8WXI2 1034 aa14.92□□□□□ -0.02
PSMC6-219ENST00000612399 RNF39Q9H2S5 420 aa14.88□□□□□ -0.03
PSMC6-219ENST00000612399 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
PSMC6-219ENST00000612399 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
PSMC6-219ENST00000612399 DNAJC5BQ9UF47 199 aa14.63□□□□□ -0.07
PSMC6-219ENST00000612399 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
PSMC6-219ENST00000612399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.32□□□□□ -0.12
PSMC6-219ENST00000612399 NPM3O75607 178 aaKnown RBP14.22□□□□□ -0.13
PSMC6-219ENST00000612399 POTEHQ6S545 545 aa14.06□□□□□ -0.16
PSMC6-219ENST00000612399 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
PSMC6-219ENST00000612399 CAPN15O75808 1086 aa13.85□□□□□ -0.19
PSMC6-219ENST00000612399 DSG3P32926 999 aa13.83□□□□□ -0.2
PSMC6-219ENST00000612399 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
PSMC6-219ENST00000612399 KCNA4P22459 653 aa13.68□□□□□ -0.22
PSMC6-219ENST00000612399 APLP2Q06481 763 aa13.66□□□□□ -0.22
PSMC6-219ENST00000612399 SLC4A2P04920 1241 aa13.64□□□□□ -0.23
PSMC6-219ENST00000612399 ZNF219Q9P2Y4 722 aaPredicted RBP13.57□□□□□ -0.24
PSMC6-219ENST00000612399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
PSMC6-219ENST00000612399 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
PSMC6-219ENST00000612399 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
PSMC6-219ENST00000612399 ABCB7O75027 752 aa13.48□□□□□ -0.25
PSMC6-219ENST00000612399 SAMD1Q6SPF0 538 aaPredicted RBP13.44□□□□□ -0.26
PSMC6-219ENST00000612399 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
PSMC6-219ENST00000612399 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
PSMC6-219ENST00000612399 POLA2Q14181 598 aa13.11□□□□□ -0.31
PSMC6-219ENST00000612399 CHRDL2Q6WN34 429 aa13.03□□□□□ -0.32
PSMC6-219ENST00000612399 ZBTB12Q9Y330 459 aaPredicted RBP12.92□□□□□ -0.34
PSMC6-219ENST00000612399 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
PSMC6-219ENST00000612399 SLC4A1APQ9BWU0 796 aaKnown RBP12.9□□□□□ -0.35
PSMC6-219ENST00000612399 AKT1S1Q96B36 256 aa12.89□□□□□ -0.35
PSMC6-219ENST00000612399 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
PSMC6-219ENST00000612399 REM2Q8IYK8 340 aaPredicted RBP12.73□□□□□ -0.37
PSMC6-219ENST00000612399 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
PSMC6-219ENST00000612399 SP7Q8TDD2 431 aaPredicted RBP12.7□□□□□ -0.38
PSMC6-219ENST00000612399 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
PSMC6-219ENST00000612399 PITPNM1O00562 1244 aa12.59□□□□□ -0.39
PSMC6-219ENST00000612399 NISCHQ9Y2I1 1504 aa12.58□□□□□ -0.4
PSMC6-219ENST00000612399 ATXN8OSP0DMR3 200 aa12.57□□□□□ -0.4
PSMC6-219ENST00000612399 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.4
PSMC6-219ENST00000612399 ZBTB22O15209 634 aa12.55□□□□□ -0.4
PSMC6-219ENST00000612399 HAX1O00165 279 aa12.51□□□□□ -0.41
PSMC6-219ENST00000612399 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
PSMC6-219ENST00000612399 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
PSMC6-219ENST00000612399 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
PSMC6-219ENST00000612399 FBLN2P98095 1184 aa12.46□□□□□ -0.42
PSMC6-219ENST00000612399 SPDYE1Q8NFV5 336 aaPredicted RBP12.31□□□□□ -0.44
PSMC6-219ENST00000612399 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.44
PSMC6-219ENST00000612399 EVX2Q03828 476 aa12.27□□□□□ -0.44
PSMC6-219ENST00000612399 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.44
PSMC6-219ENST00000612399 MKRN4PQ13434 485 aaPredicted RBP12.26□□□□□ -0.45
PSMC6-219ENST00000612399 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
PSMC6-219ENST00000612399 ZNF692Q9BU19 519 aaPredicted RBP12.24□□□□□ -0.45
PSMC6-219ENST00000612399 C19orf67A6NJJ6 358 aa12.17□□□□□ -0.46
PSMC6-219ENST00000612399 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
PSMC6-219ENST00000612399 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
PSMC6-219ENST00000612399 GABBR2O75899 941 aa12.04□□□□□ -0.48
PSMC6-219ENST00000612399 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
PSMC6-219ENST00000612399 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
PSMC6-219ENST00000612399 LHX8Q68G74 356 aa11.9□□□□□ -0.5
PSMC6-219ENST00000612399 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
PSMC6-219ENST00000612399 FARP1Q9Y4F1 1045 aaPredicted RBP11.87□□□□□ -0.51
PSMC6-219ENST00000612399 CLCN6P51797 869 aa11.84□□□□□ -0.51
PSMC6-219ENST00000612399 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
PSMC6-219ENST00000612399 CSRNP3Q8WYN3 585 aa11.73□□□□□ -0.53
PSMC6-219ENST00000612399 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
PSMC6-219ENST00000612399 ZNF579Q8NAF0 562 aaKnown RBP11.69□□□□□ -0.54
PSMC6-219ENST00000612399 DCBLD2Q96PD2 775 aa11.68□□□□□ -0.54
PSMC6-219ENST00000612399 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
PSMC6-219ENST00000612399 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
PSMC6-219ENST00000612399 SPDYE4A6NLX3 237 aa11.57□□□□□ -0.56
PSMC6-219ENST00000612399 PAK3O75914 559 aaPredicted RBP11.55□□□□□ -0.56
PSMC6-219ENST00000612399 GALR2O43603 387 aaPredicted RBP11.52□□□□□ -0.57
PSMC6-219ENST00000612399 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
PSMC6-219ENST00000612399 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
PSMC6-219ENST00000612399 EHMT2Q96KQ7 1210 aa11.42□□□□□ -0.58
PSMC6-219ENST00000612399 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
PSMC6-219ENST00000612399 OTUD5Q96G74 571 aa11.38□□□□□ -0.59
PSMC6-219ENST00000612399 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
PSMC6-219ENST00000612399 PELP1Q8IZL8 1130 aaKnown RBP11.3□□□□□ -0.6
PSMC6-219ENST00000612399 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
PSMC6-219ENST00000612399 ASTLQ6HA08 431 aaPredicted RBP11.29□□□□□ -0.6
PSMC6-219ENST00000612399 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms