RNA–Protein interactions for RNA: ENST00000264694.12

SNX25-201, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX25, Length 3,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-201ENST00000264694 NISCHQ9Y2I1 1504 aa25.7■■□□□ 1.7
SNX25-201ENST00000264694 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
SNX25-201ENST00000264694 SUPT5HO00267 1087 aaKnown RBP22.6■■□□□ 1.21
SNX25-201ENST00000264694 HRCP23327 699 aa22.29■■□□□ 1.16
SNX25-201ENST00000264694 MYO15BQ96JP2 1530 aa22.13■■□□□ 1.13
SNX25-201ENST00000264694 PCGF6Q9BYE7 350 aa22.09■■□□□ 1.13
SNX25-201ENST00000264694 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
SNX25-201ENST00000264694 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
SNX25-201ENST00000264694 ZCCHC6Q5VYS8 1495 aaKnown RBP21.81■■□□□ 1.08
SNX25-201ENST00000264694 DCAF8L2P0C7V8 631 aa21.72■■□□□ 1.07
SNX25-201ENST00000264694 LOC105371045A0A1W2PR82 267 aa21.6■■□□□ 1.05
SNX25-201ENST00000264694 DCAF1Q9Y4B6 1507 aa21.45■■□□□ 1.02
SNX25-201ENST00000264694 CCDC180Q9P1Z9 1646 aa21.35■■□□□ 1.01
SNX25-201ENST00000264694 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1
SNX25-201ENST00000264694 ZEB1P37275 1124 aaPredicted RBP20.99■□□□□ 0.95
SNX25-201ENST00000264694 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
SNX25-201ENST00000264694 PELP1Q8IZL8 1130 aaKnown RBP20.96■□□□□ 0.95
SNX25-201ENST00000264694 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
SNX25-201ENST00000264694 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
SNX25-201ENST00000264694 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
SNX25-201ENST00000264694 ABCC9O60706 1549 aa20.67■□□□□ 0.9
SNX25-201ENST00000264694 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
SNX25-201ENST00000264694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.58■□□□□ 0.88
SNX25-201ENST00000264694 RB1CC1Q8TDY2 1594 aa20.54■□□□□ 0.88
SNX25-201ENST00000264694 NEUROD1Q13562 356 aa20.53■□□□□ 0.88
SNX25-201ENST00000264694 ACIN1Q9UKV3 1341 aaKnown RBP20.52■□□□□ 0.88
SNX25-201ENST00000264694 CCER1Q8TC90 406 aaPredicted RBP20.49■□□□□ 0.87
SNX25-201ENST00000264694 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
SNX25-201ENST00000264694 GTF3C3Q9Y5Q9 886 aa20.4■□□□□ 0.86
SNX25-201ENST00000264694 TTBK1Q5TCY1 1321 aaPredicted RBP20.38■□□□□ 0.85
SNX25-201ENST00000264694 DIEXFQ68CQ4 756 aaKnown RBP20.35■□□□□ 0.85
SNX25-201ENST00000264694 CENPBP07199 599 aaPredicted RBP20.28■□□□□ 0.84
SNX25-201ENST00000264694 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
SNX25-201ENST00000264694 MYT1Q01538 1121 aa20.13■□□□□ 0.81
SNX25-201ENST00000264694 MROH2BQ7Z745 1585 aa20.12■□□□□ 0.81
SNX25-201ENST00000264694 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
SNX25-201ENST00000264694 WIZO95785 1651 aa20.04■□□□□ 0.8
SNX25-201ENST00000264694 ZNF316A6NFI3 1004 aaPredicted RBP19.99■□□□□ 0.79
SNX25-201ENST00000264694 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
SNX25-201ENST00000264694 ABCC8Q09428 1581 aa19.89■□□□□ 0.77
SNX25-201ENST00000264694 WRNQ14191 1432 aaPredicted RBP eCLIP19.89■□□□□ 0.77
SNX25-201ENST00000264694 MIER1Q8N108 512 aa19.89■□□□□ 0.77
SNX25-201ENST00000264694 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
SNX25-201ENST00000264694 UBTFP17480 764 aaKnown RBP19.86■□□□□ 0.77
SNX25-201ENST00000264694 SOGA1O94964 1423 aa19.83■□□□□ 0.77
SNX25-201ENST00000264694 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.76
SNX25-201ENST00000264694 HNRNPUL2Q1KMD3 747 aaKnown RBP19.82■□□□□ 0.76
SNX25-201ENST00000264694 BAZ1AQ9NRL2 1556 aaPredicted RBP19.8■□□□□ 0.76
SNX25-201ENST00000264694 TNIKQ9UKE5 1360 aa19.77■□□□□ 0.76
SNX25-201ENST00000264694 CSRNP3Q8WYN3 585 aa19.73■□□□□ 0.75
SNX25-201ENST00000264694 RUSC2Q8N2Y8 1516 aa19.72■□□□□ 0.75
SNX25-201ENST00000264694 NACADO15069 1562 aa19.71■□□□□ 0.75
SNX25-201ENST00000264694 TOP2AP11388 1531 aaKnown RBP19.59■□□□□ 0.73
SNX25-201ENST00000264694 RANGAP1P46060 587 aaPredicted RBP19.57■□□□□ 0.72
SNX25-201ENST00000264694 GOLGA3Q08378 1498 aa19.56■□□□□ 0.72
SNX25-201ENST00000264694 SMARCA2P51531 1590 aa19.55■□□□□ 0.72
SNX25-201ENST00000264694 EEA1Q15075 1411 aa19.53■□□□□ 0.72
SNX25-201ENST00000264694 APLP2Q06481 763 aa19.47■□□□□ 0.71
SNX25-201ENST00000264694 CLIP1P30622 1438 aa19.45■□□□□ 0.7
SNX25-201ENST00000264694 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
SNX25-201ENST00000264694 SUPT16HQ9Y5B9 1047 aaKnown RBP19.44■□□□□ 0.7
SNX25-201ENST00000264694 CEP164Q9UPV0 1460 aa19.37■□□□□ 0.69
SNX25-201ENST00000264694 VPS8Q8N3P4 1428 aa19.36■□□□□ 0.69
SNX25-201ENST00000264694 TSHZ2Q9NRE2 1034 aa19.29■□□□□ 0.68
SNX25-201ENST00000264694 DHX57Q6P158 1386 aaKnown RBP19.28■□□□□ 0.68
SNX25-201ENST00000264694 RAPGEF2Q9Y4G8 1499 aa19.27■□□□□ 0.68
SNX25-201ENST00000264694 SYNJ1O43426 1573 aa19.26■□□□□ 0.67
SNX25-201ENST00000264694 KIF21BO75037 1637 aa19.24■□□□□ 0.67
SNX25-201ENST00000264694 CLSPNQ9HAW4 1339 aa19.23■□□□□ 0.67
SNX25-201ENST00000264694 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNX25-201ENST00000264694 KCNH8Q96L42 1107 aa19.22■□□□□ 0.67
SNX25-201ENST00000264694 BCANQ96GW7 911 aa19.21■□□□□ 0.67
SNX25-201ENST00000264694 BCL11AQ9H165 835 aa19.2■□□□□ 0.66
SNX25-201ENST00000264694 KANK4Q5T7N3 995 aaPredicted RBP19.18■□□□□ 0.66
SNX25-201ENST00000264694 ITGAEP38570 1179 aa19.16■□□□□ 0.66
SNX25-201ENST00000264694 ANP32EQ9BTT0 268 aa19.15■□□□□ 0.66
SNX25-201ENST00000264694 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
SNX25-201ENST00000264694 UNC13AQ9UPW8 1703 aa19.07■□□□□ 0.64
SNX25-201ENST00000264694 FKBP8Q14318 412 aa19.05■□□□□ 0.64
SNX25-201ENST00000264694 ARAP1Q96P48 1450 aa19.02■□□□□ 0.63
SNX25-201ENST00000264694 DDX10Q13206 875 aaKnown RBP18.98■□□□□ 0.63
SNX25-201ENST00000264694 RRBP1Q9P2E9 1410 aaKnown RBP18.94■□□□□ 0.62
SNX25-201ENST00000264694 CCNB3Q8WWL7 1395 aa18.94■□□□□ 0.62
SNX25-201ENST00000264694 HIRIP3Q9BW71 556 aaPredicted RBP18.91■□□□□ 0.62
SNX25-201ENST00000264694 RAB3GAP2Q9H2M9 1393 aa18.9■□□□□ 0.62
SNX25-201ENST00000264694 SIN3AQ96ST3 1273 aa18.89■□□□□ 0.61
SNX25-201ENST00000264694 TRIM52Q96A61 297 aa18.88■□□□□ 0.61
SNX25-201ENST00000264694 PEG3Q9GZU2 1588 aa18.88■□□□□ 0.61
SNX25-201ENST00000264694 PRXQ9BXM0 1461 aa18.88■□□□□ 0.61
SNX25-201ENST00000264694 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
SNX25-201ENST00000264694 RBM19Q9Y4C8 960 aaKnown RBP18.86■□□□□ 0.61
SNX25-201ENST00000264694 BICRAQ9NZM4 1560 aa18.86■□□□□ 0.61
SNX25-201ENST00000264694 NEFLP07196 543 aa18.85■□□□□ 0.61
SNX25-201ENST00000264694 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
SNX25-201ENST00000264694 CUX2O14529 1486 aa18.85■□□□□ 0.61
SNX25-201ENST00000264694 MAPKBP1O60336 1514 aa18.83■□□□□ 0.6
SNX25-201ENST00000264694 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
SNX25-201ENST00000264694 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
SNX25-201ENST00000264694 ARHGAP35Q9NRY4 1499 aa18.77■□□□□ 0.6
SNX25-201ENST00000264694 FAM50AQ14320 339 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms