Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 MFSD12-212ENST00000591878 557 ntTSL 515.53■□□□□ 0.082e-8■■■□□ 15.5
RPS3P23396 AP2B1-203ENST00000588116 779 ntTSL 56.28□□□□□ -1.45e-7■■■□□ 15.5
RPS3P23396 CD151-215ENST00000529810 608 ntTSL 316.74■□□□□ 0.273e-7■■■□□ 15.5
RPS3P23396 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC11.49□□□□□ -0.573e-9■■■□□ 15.5
RPS3P23396 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC11.04□□□□□ -0.643e-9■■■□□ 15.5
RPS3P23396 P4HB-209ENST00000474712 390 ntTSL 212.5□□□□□ -0.411e-32■■■□□ 15.5
RPS3P23396 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.99■■□□□ 1.111e-7■■■□□ 15.5
RPS3P23396 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.5■□□□□ 0.871e-7■■■□□ 15.5
RPS3P23396 IDH2-204ENST00000560061 1449 ntTSL 217.38■□□□□ 0.371e-7■■■□□ 15.5
RPS3P23396 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.021e-7■■■□□ 15.5
RPS3P23396 SERPINA5-209ENST00000555681 618 ntTSL 213.06□□□□□ -0.322e-14■■■□□ 15.5
RPS3P23396 TSPAN9-203ENST00000431374 558 ntTSL 414.88□□□□□ -0.032e-6■■■□□ 15.5
RPS3P23396 TSPAN9-202ENST00000407263 956 ntTSL 5 BASIC10.03□□□□□ -0.82e-6■■■□□ 15.5
RPS3P23396 MCM5-209ENST00000493076 4599 ntTSL 211.67□□□□□ -0.545e-7■■■□□ 15.5
RPS3P23396 TNS3-201ENST00000311160 7618 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.732e-6■■■□□ 15.5
RPS3P23396 SNU13-205ENST00000463675 786 ntTSL 314.77□□□□□ -0.052e-9■■■□□ 15.4
RPS3P23396 SNU13-204ENST00000402458 462 ntTSL 3 BASIC13.41□□□□□ -0.262e-9■■■□□ 15.4
RPS3P23396 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.332e-9■■■□□ 15.4
RPS3P23396 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.482e-9■■■□□ 15.4
RPS3P23396 SNU13-202ENST00000355257 1503 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.672e-9■■■□□ 15.4
RPS3P23396 MVD-205ENST00000562981 537 ntTSL 216.52■□□□□ 0.249e-14■■■□□ 15.4
RPS3P23396 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.45□□□□□ -0.423e-7■■■□□ 15.4
RPS3P23396 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC11.57□□□□□ -0.563e-7■■■□□ 15.4
RPS3P23396 BAG6-237ENST00000375976 3644 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.593e-7■■■□□ 15.4
RPS3P23396 BAG6-236ENST00000375964 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.63e-7■■■□□ 15.4
RPS3P23396 BAG6-234ENST00000211379 3779 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.643e-7■■■□□ 15.4
RPS3P23396 ALB-210ENST00000504043 422 ntTSL 22.78□□□□□ -1.961e-323■■■□□ 15.4
RPS3P23396 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.012e-8■■■□□ 15.4
RPS3P23396 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.483e-8■■■□□ 15.4
RPS3P23396 P4HB-206ENST00000471535 579 ntTSL 423.15■■□□□ 1.31e-61■■■□□ 15.4
RPS3P23396 ACADVL-232ENST00000583074 410 ntTSL 518.01■□□□□ 0.471e-7■■■□□ 15.4
RPS3P23396 ACADVL-220ENST00000579546 582 ntTSL 517.25■□□□□ 0.351e-7■■■□□ 15.4
RPS3P23396 ACADVL-218ENST00000579391 341 ntTSL 215.55■□□□□ 0.081e-7■■■□□ 15.4
RPS3P23396 ACADVL-239ENST00000585203 947 ntTSL 514.55□□□□□ -0.081e-7■■■□□ 15.4
RPS3P23396 ACADVL-222ENST00000579894 429 ntTSL 213.53□□□□□ -0.241e-7■■■□□ 15.4
RPS3P23396 PIGT-248ENST00000639783 1691 ntTSL 217.39■□□□□ 0.371e-7■■■□□ 15.4
RPS3P23396 PIGT-255ENST00000640175 1429 ntTSL 212.86□□□□□ -0.351e-7■■■□□ 15.4
RPS3P23396 HPN-208ENST00000600390 564 ntTSL 418.17■□□□□ 0.56e-8■■■□□ 15.4
RPS3P23396 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC13.2□□□□□ -0.34e-7■■■□□ 15.4
RPS3P23396 SLC39A14-205ENST00000517370 839 ntTSL 312.99□□□□□ -0.331e-10■■■□□ 15.4
RPS3P23396 SNAPC3-203ENST00000421710 730 ntTSL 524.38■■□□□ 1.492e-6■■■□□ 15.4
RPS3P23396 SNAPC3-206ENST00000490969 2524 ntTSL 1 (best)18.58■□□□□ 0.562e-6■■■□□ 15.4
RPS3P23396 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.452e-6■■■□□ 15.4
RPS3P23396 SNAPC3-205ENST00000467062 2574 ntTSL 1 (best)17.35■□□□□ 0.372e-6■■■□□ 15.4
RPS3P23396 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.252e-6■■■□□ 15.4
RPS3P23396 ACSS2-220ENST00000491533 933 ntTSL 511.38□□□□□ -0.598e-8■■■□□ 15.4
RPS3P23396 ACSS2-223ENST00000494727 1030 ntTSL 29.58□□□□□ -0.888e-8■■■□□ 15.4
RPS3P23396 ASH2L-210ENST00000524247 575 ntTSL 50.87□□□□□ -2.272e-6■■■□□ 15.4
RPS3P23396 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.399e-8■■■□□ 15.4
RPS3P23396 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.81■■□□□ 1.249e-8■■■□□ 15.4
RPS3P23396 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.579e-8■■■□□ 15.4
RPS3P23396 FKBP8-202ENST00000544835 1292 ntTSL 1 (best)17.02■□□□□ 0.329e-8■■■□□ 15.4
RPS3P23396 FKBP8-211ENST00000601844 1548 ntTSL 517■□□□□ 0.319e-8■■■□□ 15.4
RPS3P23396 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.19e-8■■■□□ 15.4
RPS3P23396 FKBP8-208ENST00000597611 966 ntTSL 314.79□□□□□ -0.049e-8■■■□□ 15.4
RPS3P23396 FKBP8-210ENST00000599540 1140 ntTSL 212.79□□□□□ -0.369e-8■■■□□ 15.4
RPS3P23396 NDRG1-220ENST00000521664 594 ntTSL 216.51■□□□□ 0.235e-8■■■□□ 15.4
RPS3P23396 CFB-272ENST00000452035 1866 ntTSL 215.7■□□□□ 0.14e-10■■■□□ 15.4
RPS3P23396 APLP2-206ENST00000525215 478 ntTSL 24.05□□□□□ -1.762e-13■■■□□ 15.4
RPS3P23396 TKFC-202ENST00000524440 496 ntTSL 218■□□□□ 0.472e-8■■■□□ 15.4
RPS3P23396 TKFC-213ENST00000530329 483 ntTSL 311.53□□□□□ -0.562e-8■■■□□ 15.4
RPS3P23396 ACTB-212ENST00000484841 1032 ntTSL 519.35■□□□□ 0.692e-30■■■□□ 15.4
RPS3P23396 ACTB-209ENST00000473257 556 ntTSL 310.62□□□□□ -0.712e-30■■■□□ 15.4
RPS3P23396 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.112e-6■■■□□ 15.4
RPS3P23396 SPTAN1-201ENST00000358161 7794 ntTSL 1 (best) BASIC9.93□□□□□ -0.823e-7■■■□□ 15.4
RPS3P23396 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.973e-7■■■□□ 15.4
RPS3P23396 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.993e-7■■■□□ 15.4
RPS3P23396 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.16□□□□□ -1.13e-7■■■□□ 15.4
RPS3P23396 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.02□□□□□ -1.133e-7■■■□□ 15.4
RPS3P23396 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.541e-6■■■□□ 15.4
RPS3P23396 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.8■■□□□ 1.721e-7■■■□□ 15.4
RPS3P23396 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.7■■□□□ 1.221e-7■■■□□ 15.4
RPS3P23396 TPI1-202ENST00000396705 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.571e-7■■■□□ 15.4
RPS3P23396 CFL1-205ENST00000526975 567 ntTSL 318.1■□□□□ 0.493e-20■■■□□ 15.4
RPS3P23396 ICAM1-205ENST00000592686 571 ntTSL 214.06□□□□□ -0.166e-12■■■□□ 15.4
RPS3P23396 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.362e-7■■■□□ 15.4
RPS3P23396 HNRNPL-212ENST00000601449 1918 ntTSL 516.99■□□□□ 0.312e-7■■■□□ 15.4
RPS3P23396 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC13.45□□□□□ -0.262e-7■■■□□ 15.4
RPS3P23396 HNRNPL-202ENST00000388749 1952 ntTSL 510.55□□□□□ -0.722e-7■■■□□ 15.4
RPS3P23396 PRCP-207ENST00000528082 491 ntTSL 510.34□□□□□ -0.755e-7■■■□□ 15.4
RPS3P23396 PRCP-208ENST00000529671 611 ntTSL 48.4□□□□□ -1.065e-7■■■□□ 15.4
RPS3P23396 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.577e-7■■■□□ 15.4
RPS3P23396 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.977e-7■■■□□ 15.4
RPS3P23396 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.187e-7■■■□□ 15.4
RPS3P23396 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.287e-7■■■□□ 15.4
RPS3P23396 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.357e-8■■■□□ 15.4
RPS3P23396 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.977e-8■■■□□ 15.4
RPS3P23396 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.187e-8■■■□□ 15.4
RPS3P23396 PTPRF-202ENST00000372405 1962 ntTSL 1 (best)13.67□□□□□ -0.222e-7■■■□□ 15.4
RPS3P23396 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.699e-17■■■□□ 15.4
RPS3P23396 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.92■□□□□ 0.149e-17■■■□□ 15.4
RPS3P23396 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.02■□□□□ 0.483e-8■■■□□ 15.4
RPS3P23396 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.233e-8■■■□□ 15.4
RPS3P23396 ACTN4-211ENST00000589528 441 ntTSL 214.4□□□□□ -0.13e-8■■■□□ 15.4
RPS3P23396 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.75□□□□□ -0.213e-8■■■□□ 15.4
RPS3P23396 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.682e-7■■■□□ 15.4
RPS3P23396 C3-202ENST00000594005 418 ntTSL 311.35□□□□□ -0.592e-27■■■□□ 15.4
RPS3P23396 SQSTM1-206ENST00000466342 808 ntTSL 211.58□□□□□ -0.569e-8■■■□□ 15.4
RPS3P23396 C4A-255ENST00000483974 465 ntTSL 220.33■□□□□ 0.853e-28■■■□□ 15.4
RPS3P23396 C4A-258ENST00000496659 567 ntTSL 29.89□□□□□ -0.833e-28■■■□□ 15.4
Retrieved 100 of 24,271 protein–RNA pairs in 941.5 ms