RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
SPTAN1-201ENST00000358161 NISCHQ9Y2I1 1504 aa17.85■□□□□ 0.45
SPTAN1-201ENST00000358161 SUPT5HO00267 1087 aaKnown RBP17.08■□□□□ 0.33
SPTAN1-201ENST00000358161 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
SPTAN1-201ENST00000358161 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
SPTAN1-201ENST00000358161 FAM9AQ8IZU1 332 aaPredicted RBP16.38■□□□□ 0.21
SPTAN1-201ENST00000358161 APLP2Q06481 763 aa16.38■□□□□ 0.21
SPTAN1-201ENST00000358161 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
SPTAN1-201ENST00000358161 PELP1Q8IZL8 1130 aaKnown RBP15.93■□□□□ 0.14
SPTAN1-201ENST00000358161 RANGAP1P46060 587 aaPredicted RBP15.84■□□□□ 0.13
SPTAN1-201ENST00000358161 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.12
SPTAN1-201ENST00000358161 ATP1B4Q9UN42 357 aaPredicted RBP15.81■□□□□ 0.12
SPTAN1-201ENST00000358161 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.11
SPTAN1-201ENST00000358161 PCGF6Q9BYE7 350 aa15.66■□□□□ 0.1
SPTAN1-201ENST00000358161 ZEB1P37275 1124 aaPredicted RBP15.6■□□□□ 0.09
SPTAN1-201ENST00000358161 CCER1Q8TC90 406 aaPredicted RBP15.56■□□□□ 0.08
SPTAN1-201ENST00000358161 ABCC9O60706 1549 aa15.45■□□□□ 0.06
SPTAN1-201ENST00000358161 CENPBP07199 599 aaPredicted RBP15.37■□□□□ 0.05
SPTAN1-201ENST00000358161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
SPTAN1-201ENST00000358161 HNRNPUL2Q1KMD3 747 aaKnown RBP15.35■□□□□ 0.05
SPTAN1-201ENST00000358161 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
SPTAN1-201ENST00000358161 PABPN1Q86U42 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
SPTAN1-201ENST00000358161 PPARGC1BQ86YN6 1023 aaKnown RBP15.2■□□□□ 0.02
SPTAN1-201ENST00000358161 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
SPTAN1-201ENST00000358161 NEFLP07196 543 aa15.14■□□□□ 0.01
SPTAN1-201ENST00000358161 ITGAEP38570 1179 aa15.14■□□□□ 0.01
SPTAN1-201ENST00000358161 ERICH6Q7L0X2 663 aa15.14■□□□□ 0.01
SPTAN1-201ENST00000358161 CHIC1Q5VXU3 224 aa15.11■□□□□ 0.01
SPTAN1-201ENST00000358161 LOC105371045A0A1W2PR82 267 aa15.02■□□□□ -0
SPTAN1-201ENST00000358161 YTHDC1Q96MU7 727 aaKnown RBP14.97□□□□□ -0.01
SPTAN1-201ENST00000358161 POLR3GLQ9BT43 218 aa14.97□□□□□ -0.01
SPTAN1-201ENST00000358161 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
SPTAN1-201ENST00000358161 FAM50AQ14320 339 aaKnown RBP14.88□□□□□ -0.03
SPTAN1-201ENST00000358161 FBLN2P98095 1184 aa14.86□□□□□ -0.03
SPTAN1-201ENST00000358161 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
SPTAN1-201ENST00000358161 SLC4A1APQ9BWU0 796 aaKnown RBP14.81□□□□□ -0.04
SPTAN1-201ENST00000358161 TRIM52Q96A61 297 aa14.79□□□□□ -0.04
SPTAN1-201ENST00000358161 HRCP23327 699 aa14.77□□□□□ -0.04
SPTAN1-201ENST00000358161 ZCCHC6Q5VYS8 1495 aaKnown RBP14.75□□□□□ -0.05
SPTAN1-201ENST00000358161 CNGB1Q14028 1251 aaPredicted RBP14.69□□□□□ -0.06
SPTAN1-201ENST00000358161 DAXXQ9UER7 740 aaPredicted RBP14.69□□□□□ -0.06
SPTAN1-201ENST00000358161 RB1CC1Q8TDY2 1594 aa14.66□□□□□ -0.06
SPTAN1-201ENST00000358161 CSRNP3Q8WYN3 585 aa14.62□□□□□ -0.07
SPTAN1-201ENST00000358161 CDK11AQ9UQ88 783 aaPredicted RBP14.61□□□□□ -0.07
SPTAN1-201ENST00000358161 NEUROD1Q13562 356 aa14.61□□□□□ -0.07
SPTAN1-201ENST00000358161 P3H3Q8IVL6 736 aa14.57□□□□□ -0.08
SPTAN1-201ENST00000358161 ZNF326Q5BKZ1 582 aaKnown RBP14.53□□□□□ -0.08
SPTAN1-201ENST00000358161 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.08
SPTAN1-201ENST00000358161 ARID3CA6NKF2 412 aa14.5□□□□□ -0.09
SPTAN1-201ENST00000358161 BCANQ96GW7 911 aa14.49□□□□□ -0.09
SPTAN1-201ENST00000358161 NACADO15069 1562 aa14.49□□□□□ -0.09
SPTAN1-201ENST00000358161 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
SPTAN1-201ENST00000358161 ZNF777Q9ULD5 760 aaPredicted RBP14.48□□□□□ -0.09
SPTAN1-201ENST00000358161 ESF1Q9H501 851 aaKnown RBP14.46□□□□□ -0.09
SPTAN1-201ENST00000358161 CLSPNQ9HAW4 1339 aa14.44□□□□□ -0.1
SPTAN1-201ENST00000358161 ANP32CO43423 234 aa14.44□□□□□ -0.1
SPTAN1-201ENST00000358161 NEFMP07197 916 aa14.39□□□□□ -0.11
SPTAN1-201ENST00000358161 MYT1Q01538 1121 aa14.37□□□□□ -0.11
SPTAN1-201ENST00000358161 ZNF316A6NFI3 1004 aaPredicted RBP14.34□□□□□ -0.11
SPTAN1-201ENST00000358161 ZBTB47Q9UFB7 747 aaPredicted RBP14.34□□□□□ -0.11
SPTAN1-201ENST00000358161 CHMP7Q8WUX9 453 aaPredicted RBP14.33□□□□□ -0.12
SPTAN1-201ENST00000358161 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
SPTAN1-201ENST00000358161 SLC24A1O60721 1099 aa14.28□□□□□ -0.12
SPTAN1-201ENST00000358161 BAZ1BQ9UIG0 1483 aaKnown RBP14.28□□□□□ -0.12
SPTAN1-201ENST00000358161 CANXP27824 592 aaKnown RBP14.25□□□□□ -0.13
SPTAN1-201ENST00000358161 CHGAP10645 457 aaKnown RBP14.24□□□□□ -0.13
SPTAN1-201ENST00000358161 TONSLQ96HA7 1378 aa14.24□□□□□ -0.13
SPTAN1-201ENST00000358161 MTUS2Q5JR59 1369 aa14.21□□□□□ -0.13
SPTAN1-201ENST00000358161 TSPY4P0CV99 314 aa14.2□□□□□ -0.14
SPTAN1-201ENST00000358161 TSPY10P0CW01 314 aa14.2□□□□□ -0.14
SPTAN1-201ENST00000358161 RTL5Q5HYW3 569 aaPredicted RBP14.19□□□□□ -0.14
SPTAN1-201ENST00000358161 EEA1Q15075 1411 aa14.19□□□□□ -0.14
SPTAN1-201ENST00000358161 DCAF1Q9Y4B6 1507 aa14.17□□□□□ -0.14
SPTAN1-201ENST00000358161 RSF1Q96T23 1441 aaPredicted RBP14.17□□□□□ -0.14
SPTAN1-201ENST00000358161 PLPPR3Q6T4P5 718 aa14.16□□□□□ -0.14
SPTAN1-201ENST00000358161 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
SPTAN1-201ENST00000358161 BAZ1AQ9NRL2 1556 aaPredicted RBP14.15□□□□□ -0.14
SPTAN1-201ENST00000358161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.15□□□□□ -0.142e-7■■■□□ 15.9
SPTAN1-201ENST00000358161 CLIP1P30622 1438 aa14.14□□□□□ -0.15
SPTAN1-201ENST00000358161 CHIC2Q9UKJ5 165 aa14.12□□□□□ -0.15
SPTAN1-201ENST00000358161 GOLGA3Q08378 1498 aa14.12□□□□□ -0.15
SPTAN1-201ENST00000358161 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
SPTAN1-201ENST00000358161 KIF27Q86VH2 1401 aa14.1□□□□□ -0.15
SPTAN1-201ENST00000358161 ACIN1Q9UKV3 1341 aaKnown RBP14.09□□□□□ -0.15
SPTAN1-201ENST00000358161 PLEKHD1A6NEE1 506 aa14.08□□□□□ -0.16
SPTAN1-201ENST00000358161 KCNH8Q96L42 1107 aa14.03□□□□□ -0.16
SPTAN1-201ENST00000358161 BCL11AQ9H165 835 aa14.02□□□□□ -0.17
SPTAN1-201ENST00000358161 CEP164Q9UPV0 1460 aa14□□□□□ -0.17
SPTAN1-201ENST00000358161 GTF3C3Q9Y5Q9 886 aa13.98□□□□□ -0.17
SPTAN1-201ENST00000358161 KDM2AQ9Y2K7 1162 aa13.97□□□□□ -0.17
SPTAN1-201ENST00000358161 CEP162Q5TB80 1403 aa13.97□□□□□ -0.17
SPTAN1-201ENST00000358161 PPP1R15AO75807 674 aaPredicted RBP13.95□□□□□ -0.18
SPTAN1-201ENST00000358161 SMARCA2P51531 1590 aa13.94□□□□□ -0.18
SPTAN1-201ENST00000358161 TMC1Q8TDI8 760 aa13.93□□□□□ -0.18
SPTAN1-201ENST00000358161 RRP7BPQ9NSQ0 103 aa13.93□□□□□ -0.18
SPTAN1-201ENST00000358161 CFDP1Q9UEE9 299 aaPredicted RBP13.93□□□□□ -0.18
SPTAN1-201ENST00000358161 WDR43Q15061 677 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■■■□□ 18.6
SPTAN1-201ENST00000358161 DDX10Q13206 875 aaKnown RBP13.92□□□□□ -0.18
SPTAN1-201ENST00000358161 ARID4BQ4LE39 1312 aaPredicted RBP13.91□□□□□ -0.18
SPTAN1-201ENST00000358161 TNIKQ9UKE5 1360 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms