RNA–Protein interactions for RNA: ENST00000594005.1

C3-202, Transcript of complement C3, humanhuman

TSL 3

Gene C3, Length 418 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3-202ENST00000594005 NISCHQ9Y2I1 1504 aa29.1■■■□□ 2.25
C3-202ENST00000594005 ABCC9O60706 1549 aa26.7■■□□□ 1.86
C3-202ENST00000594005 CCDC180Q9P1Z9 1646 aa26.44■■□□□ 1.82
C3-202ENST00000594005 DNAJC5BQ9UF47 199 aa25.31■■□□□ 1.64
C3-202ENST00000594005 RB1CC1Q8TDY2 1594 aa25.29■■□□□ 1.64
C3-202ENST00000594005 NACADO15069 1562 aa25.01■■□□□ 1.59
C3-202ENST00000594005 UNC13AQ9UPW8 1703 aa24.84■■□□□ 1.57
C3-202ENST00000594005 PABPN1Q86U42 306 aaKnown RBP eCLIP24.66■■□□□ 1.54
C3-202ENST00000594005 BICRAQ9NZM4 1560 aa24.58■■□□□ 1.52
C3-202ENST00000594005 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
C3-202ENST00000594005 DCAF8L2P0C7V8 631 aa24.51■■□□□ 1.51
C3-202ENST00000594005 SHROOM4Q9ULL8 1493 aa24.25■■□□□ 1.47
C3-202ENST00000594005 CC2D2AQ9P2K1 1620 aa24.16■■□□□ 1.46
C3-202ENST00000594005 CECR2Q9BXF3 1484 aa24.1■■□□□ 1.45
C3-202ENST00000594005 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
C3-202ENST00000594005 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
C3-202ENST00000594005 EIF4G1Q04637 1599 aaKnown RBP24■■□□□ 1.43
C3-202ENST00000594005 SCRIBQ14160 1630 aa23.99■■□□□ 1.43
C3-202ENST00000594005 DNAJC5Q9H3Z4 198 aa23.57■■□□□ 1.36
C3-202ENST00000594005 CUX2O14529 1486 aa23.24■■□□□ 1.31
C3-202ENST00000594005 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
C3-202ENST00000594005 NCAPD3P42695 1498 aa23.02■■□□□ 1.28
C3-202ENST00000594005 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
C3-202ENST00000594005 ATAD2BQ9ULI0 1458 aa22.91■■□□□ 1.26
C3-202ENST00000594005 SMARCA2P51531 1590 aa22.87■■□□□ 1.25
C3-202ENST00000594005 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
C3-202ENST00000594005 NESP48681 1621 aa22.82■■□□□ 1.24
C3-202ENST00000594005 THOC2Q8NI27 1593 aaKnown RBP22.8■■□□□ 1.24
C3-202ENST00000594005 BAZ1BQ9UIG0 1483 aaKnown RBP22.68■■□□□ 1.22
C3-202ENST00000594005 BAZ1AQ9NRL2 1556 aaPredicted RBP22.65■■□□□ 1.22
C3-202ENST00000594005 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
C3-202ENST00000594005 PEG3Q9GZU2 1588 aa22.64■■□□□ 1.22
C3-202ENST00000594005 KIF21AQ7Z4S6 1674 aa22.63■■□□□ 1.21
C3-202ENST00000594005 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
C3-202ENST00000594005 MROH2BQ7Z745 1585 aa22.41■■□□□ 1.18
C3-202ENST00000594005 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
C3-202ENST00000594005 WDR62O43379 1518 aa22.34■■□□□ 1.17
C3-202ENST00000594005 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
C3-202ENST00000594005 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
C3-202ENST00000594005 CEP164Q9UPV0 1460 aa22.16■■□□□ 1.14
C3-202ENST00000594005 WIZO95785 1651 aa22.16■■□□□ 1.14
C3-202ENST00000594005 FANCD2Q9BXW9 1451 aa22.08■■□□□ 1.12
C3-202ENST00000594005 CFTRP13569 1480 aa21.97■■□□□ 1.11
C3-202ENST00000594005 URB2Q14146 1524 aaKnown RBP21.94■■□□□ 1.1
C3-202ENST00000594005 PRDM2Q13029 1718 aa21.93■■□□□ 1.1
C3-202ENST00000594005 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
C3-202ENST00000594005 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
C3-202ENST00000594005 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
C3-202ENST00000594005 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
C3-202ENST00000594005 TOP2AP11388 1531 aaKnown RBP21.86■■□□□ 1.09
C3-202ENST00000594005 ARHGEF11O15085 1522 aa21.75■■□□□ 1.07
C3-202ENST00000594005 RSF1Q96T23 1441 aaPredicted RBP21.73■■□□□ 1.07
C3-202ENST00000594005 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
C3-202ENST00000594005 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
C3-202ENST00000594005 EIF4G3O43432 1585 aaKnown RBP21.68■■□□□ 1.06
C3-202ENST00000594005 TOPBP1Q92547 1522 aa21.63■■□□□ 1.05
C3-202ENST00000594005 CHD1O14646 1710 aa21.63■■□□□ 1.05
C3-202ENST00000594005 DNMBPQ6XZF7 1577 aa21.55■■□□□ 1.04
C3-202ENST00000594005 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
C3-202ENST00000594005 ABCC8Q09428 1581 aa21.52■■□□□ 1.04
C3-202ENST00000594005 ARAP1Q96P48 1450 aa21.51■■□□□ 1.03
C3-202ENST00000594005 TARBP1Q13395 1621 aaKnown RBP21.51■■□□□ 1.03
C3-202ENST00000594005 CYB5RLQ6IPT4 315 aa21.44■■□□□ 1.02
C3-202ENST00000594005 AQRO60306 1485 aaKnown RBP eCLIP21.41■■□□□ 1.022e-27■■■■□ 23.2
C3-202ENST00000594005 POLA1P09884 1462 aaPredicted RBP21.37■■□□□ 1.01
C3-202ENST00000594005 TRHP20396 242 aaPredicted RBP21.34■■□□□ 1.01
C3-202ENST00000594005 CLASP1Q7Z460 1538 aa21.32■■□□□ 1
C3-202ENST00000594005 WDR97A6NE52 1622 aa21.31■■□□□ 1
C3-202ENST00000594005 FBLN2P98095 1184 aa21.27■■□□□ 1
C3-202ENST00000594005 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
C3-202ENST00000594005 RAD54L2Q9Y4B4 1467 aa21.26■□□□□ 0.99
C3-202ENST00000594005 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
C3-202ENST00000594005 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
C3-202ENST00000594005 TDRD9Q8NDG6 1382 aaKnown RBP21.19■□□□□ 0.98
C3-202ENST00000594005 SOGA1O94964 1423 aa21.18■□□□□ 0.98
C3-202ENST00000594005 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
C3-202ENST00000594005 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
C3-202ENST00000594005 GRIN2BQ13224 1484 aa21.12■□□□□ 0.97
C3-202ENST00000594005 SYNJ2O15056 1496 aa21.11■□□□□ 0.97
C3-202ENST00000594005 CUX1P39880 1505 aa21.1■□□□□ 0.97
C3-202ENST00000594005 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
C3-202ENST00000594005 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
C3-202ENST00000594005 GAPVD1Q14C86 1478 aa21.04■□□□□ 0.96
C3-202ENST00000594005 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
C3-202ENST00000594005 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
C3-202ENST00000594005 ERCC6L2Q5T890 1561 aa20.91■□□□□ 0.94
C3-202ENST00000594005 ADAMTS12P58397 1594 aa20.88■□□□□ 0.93
C3-202ENST00000594005 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
C3-202ENST00000594005 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
C3-202ENST00000594005 CEP170Q5SW79 1584 aa20.85■□□□□ 0.93
C3-202ENST00000594005 SHROOM2Q13796 1616 aa20.85■□□□□ 0.93
C3-202ENST00000594005 KIF13AQ9H1H9 1805 aa20.84■□□□□ 0.93
C3-202ENST00000594005 NUP160Q12769 1436 aa20.81■□□□□ 0.92
C3-202ENST00000594005 BIVM-ERCC5R4GMW8 1640 aa20.72■□□□□ 0.91
C3-202ENST00000594005 FHAD1B1AJZ9 1412 aa20.69■□□□□ 0.9
C3-202ENST00000594005 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
C3-202ENST00000594005 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
C3-202ENST00000594005 ERICH3Q5RHP9 1530 aa20.66■□□□□ 0.9
C3-202ENST00000594005 RUSC2Q8N2Y8 1516 aa20.6■□□□□ 0.89
C3-202ENST00000594005 PRG4Q92954 1404 aaPredicted RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms