RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 DCAF8L2P0C7V8 631 aa28.56■■■□□ 2.16
SNAPC3-202ENST00000380821 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
SNAPC3-202ENST00000380821 PELP1Q8IZL8 1130 aaKnown RBP27.5■■□□□ 1.99
SNAPC3-202ENST00000380821 NISCHQ9Y2I1 1504 aa27.33■■□□□ 1.97
SNAPC3-202ENST00000380821 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
SNAPC3-202ENST00000380821 MYT1Q01538 1121 aa26.83■■□□□ 1.89
SNAPC3-202ENST00000380821 EHMT2Q96KQ7 1210 aa26.67■■□□□ 1.86
SNAPC3-202ENST00000380821 APLP2Q06481 763 aa26.59■■□□□ 1.85
SNAPC3-202ENST00000380821 CENPBP07199 599 aaPredicted RBP26.39■■□□□ 1.82
SNAPC3-202ENST00000380821 ZEB1P37275 1124 aaPredicted RBP26.35■■□□□ 1.81
SNAPC3-202ENST00000380821 PCGF6Q9BYE7 350 aa26.33■■□□□ 1.81
SNAPC3-202ENST00000380821 ERICH6Q7L0X2 663 aa26.27■■□□□ 1.8
SNAPC3-202ENST00000380821 CCER1Q8TC90 406 aaPredicted RBP26.22■■□□□ 1.79
SNAPC3-202ENST00000380821 FAM9AQ8IZU1 332 aaPredicted RBP26.04■■□□□ 1.76
SNAPC3-202ENST00000380821 TTBK1Q5TCY1 1321 aaPredicted RBP25.92■■□□□ 1.74
SNAPC3-202ENST00000380821 NEFLP07196 543 aa25.7■■□□□ 1.71
SNAPC3-202ENST00000380821 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
SNAPC3-202ENST00000380821 YTHDC1Q96MU7 727 aaKnown RBP25.49■■□□□ 1.67
SNAPC3-202ENST00000380821 RANGAP1P46060 587 aaPredicted RBP25.44■■□□□ 1.66
SNAPC3-202ENST00000380821 UBTFP17480 764 aaKnown RBP25.35■■□□□ 1.65
SNAPC3-202ENST00000380821 TRIM26Q12899 539 aaPredicted RBP25.31■■□□□ 1.64
SNAPC3-202ENST00000380821 ATP1B4Q9UN42 357 aaPredicted RBP25.29■■□□□ 1.64
SNAPC3-202ENST00000380821 HRCP23327 699 aa25.25■■□□□ 1.63
SNAPC3-202ENST00000380821 DAXXQ9UER7 740 aaPredicted RBP24.99■■□□□ 1.59
SNAPC3-202ENST00000380821 PPARGC1BQ86YN6 1023 aaKnown RBP24.92■■□□□ 1.58
SNAPC3-202ENST00000380821 RTL5Q5HYW3 569 aaPredicted RBP24.57■■□□□ 1.52
SNAPC3-202ENST00000380821 CHIC1Q5VXU3 224 aa24.57■■□□□ 1.52
SNAPC3-202ENST00000380821 ITGAEP38570 1179 aa24.55■■□□□ 1.52
SNAPC3-202ENST00000380821 DIEXFQ68CQ4 756 aaKnown RBP24.54■■□□□ 1.52
SNAPC3-202ENST00000380821 LOC105371045A0A1W2PR82 267 aa24.53■■□□□ 1.52
SNAPC3-202ENST00000380821 POLR3GLQ9BT43 218 aa24.53■■□□□ 1.52
SNAPC3-202ENST00000380821 HNRNPUL2Q1KMD3 747 aaKnown RBP24.51■■□□□ 1.51
SNAPC3-202ENST00000380821 ZNF316A6NFI3 1004 aaPredicted RBP24.44■■□□□ 1.5
SNAPC3-202ENST00000380821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.33■■□□□ 1.49
SNAPC3-202ENST00000380821 CLSPNQ9HAW4 1339 aa24.22■■□□□ 1.47
SNAPC3-202ENST00000380821 MYT1LQ9UL68 1186 aa24.22■■□□□ 1.47
SNAPC3-202ENST00000380821 GTF3C3Q9Y5Q9 886 aa24.19■■□□□ 1.46
SNAPC3-202ENST00000380821 CNGB1Q14028 1251 aaPredicted RBP24.18■■□□□ 1.46
SNAPC3-202ENST00000380821 CDK11AQ9UQ88 783 aaPredicted RBP24.09■■□□□ 1.45
SNAPC3-202ENST00000380821 ANP32CO43423 234 aa24.01■■□□□ 1.43
SNAPC3-202ENST00000380821 BCANQ96GW7 911 aa24.01■■□□□ 1.43
SNAPC3-202ENST00000380821 FAM50AQ14320 339 aaKnown RBP23.99■■□□□ 1.43
SNAPC3-202ENST00000380821 SLC4A1APQ9BWU0 796 aaKnown RBP23.99■■□□□ 1.43
SNAPC3-202ENST00000380821 ACIN1Q9UKV3 1341 aaKnown RBP23.9■■□□□ 1.42
SNAPC3-202ENST00000380821 TRIM52Q96A61 297 aa23.89■■□□□ 1.42
SNAPC3-202ENST00000380821 NEUROD1Q13562 356 aa23.89■■□□□ 1.41
SNAPC3-202ENST00000380821 ANP32AP39687 249 aaKnown RBP23.72■■□□□ 1.39
SNAPC3-202ENST00000380821 ZBTB47Q9UFB7 747 aaPredicted RBP23.72■■□□□ 1.39
SNAPC3-202ENST00000380821 CANXP27824 592 aaKnown RBP23.6■■□□□ 1.37
SNAPC3-202ENST00000380821 EIF5BO60841 1220 aaKnown RBP23.59■■□□□ 1.37
SNAPC3-202ENST00000380821 ZNF326Q5BKZ1 582 aaKnown RBP23.57■■□□□ 1.36
SNAPC3-202ENST00000380821 GLIPR1L2Q4G1C9 344 aa23.52■■□□□ 1.36
SNAPC3-202ENST00000380821 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
SNAPC3-202ENST00000380821 FKBP8Q14318 412 aa23.39■■□□□ 1.34
SNAPC3-202ENST00000380821 NPM2Q86SE8 214 aaKnown RBP23.39■■□□□ 1.34
SNAPC3-202ENST00000380821 NEFMP07197 916 aa23.38■■□□□ 1.33
SNAPC3-202ENST00000380821 ANP32BQ92688 251 aaKnown RBP23.37■■□□□ 1.33
SNAPC3-202ENST00000380821 CSRNP3Q8WYN3 585 aa23.28■■□□□ 1.32
SNAPC3-202ENST00000380821 UPF2Q9HAU5 1272 aaKnown RBP23.22■■□□□ 1.31
SNAPC3-202ENST00000380821 TONSLQ96HA7 1378 aa23.21■■□□□ 1.31
SNAPC3-202ENST00000380821 HNRNPUQ00839 825 aaKnown RBP eCLIP23.17■■□□□ 1.3
SNAPC3-202ENST00000380821 BCL11AQ9H165 835 aa23.16■■□□□ 1.3
SNAPC3-202ENST00000380821 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.3
SNAPC3-202ENST00000380821 HSP90AA1P07900 732 aaKnown RBP23.14■■□□□ 1.29
SNAPC3-202ENST00000380821 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
SNAPC3-202ENST00000380821 ABCC9O60706 1549 aa23.1■■□□□ 1.29
SNAPC3-202ENST00000380821 P3H3Q8IVL6 736 aa23.06■■□□□ 1.28
SNAPC3-202ENST00000380821 DDX10Q13206 875 aaKnown RBP23.04■■□□□ 1.28
SNAPC3-202ENST00000380821 CCDC136Q96JN2 1154 aa23.04■■□□□ 1.28
SNAPC3-202ENST00000380821 FAM9BQ8IZU0 186 aa23.04■■□□□ 1.28
SNAPC3-202ENST00000380821 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
SNAPC3-202ENST00000380821 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.02■■□□□ 1.28
SNAPC3-202ENST00000380821 NBR1Q14596 966 aa23.01■■□□□ 1.27
SNAPC3-202ENST00000380821 FBLN2P98095 1184 aa22.96■■□□□ 1.27
SNAPC3-202ENST00000380821 ZNF777Q9ULD5 760 aaPredicted RBP22.96■■□□□ 1.27
SNAPC3-202ENST00000380821 ARID3CA6NKF2 412 aa22.89■■□□□ 1.26
SNAPC3-202ENST00000380821 TMC1Q8TDI8 760 aa22.89■■□□□ 1.26
SNAPC3-202ENST00000380821 DDRGK1Q96HY6 314 aa22.86■■□□□ 1.25
SNAPC3-202ENST00000380821 MIER1Q8N108 512 aa22.84■■□□□ 1.25
SNAPC3-202ENST00000380821 MRS2Q9HD23 443 aa22.83■■□□□ 1.25
SNAPC3-202ENST00000380821 WDR43Q15061 677 aaKnown RBP eCLIP22.82■■□□□ 1.24
SNAPC3-202ENST00000380821 SALL2Q9Y467 1007 aaPredicted RBP22.77■■□□□ 1.24
SNAPC3-202ENST00000380821 ANP32EQ9BTT0 268 aa22.74■■□□□ 1.23
SNAPC3-202ENST00000380821 BECN1Q14457 450 aa22.73■■□□□ 1.23
SNAPC3-202ENST00000380821 ARXQ96QS3 562 aa22.7■■□□□ 1.22
SNAPC3-202ENST00000380821 SCRIBQ14160 1630 aa22.7■■□□□ 1.22
SNAPC3-202ENST00000380821 CCDC180Q9P1Z9 1646 aa22.7■■□□□ 1.22
SNAPC3-202ENST00000380821 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
SNAPC3-202ENST00000380821 IRX6P78412 446 aaPredicted RBP22.68■■□□□ 1.22
SNAPC3-202ENST00000380821 CHGAP10645 457 aaKnown RBP22.65■■□□□ 1.22
SNAPC3-202ENST00000380821 MYH16Q9H6N6 1097 aa22.65■■□□□ 1.22
SNAPC3-202ENST00000380821 EIF4G2P78344 907 aaKnown RBP eCLIP22.63■■□□□ 1.21
SNAPC3-202ENST00000380821 TRIM44Q96DX7 344 aaPredicted RBP22.62■■□□□ 1.21
SNAPC3-202ENST00000380821 CHIC2Q9UKJ5 165 aa22.6■■□□□ 1.21
SNAPC3-202ENST00000380821 STAG3Q9UJ98 1225 aa22.6■■□□□ 1.21
SNAPC3-202ENST00000380821 CLIP1P30622 1438 aa22.59■■□□□ 1.21
SNAPC3-202ENST00000380821 ESF1Q9H501 851 aaKnown RBP22.58■■□□□ 1.21
SNAPC3-202ENST00000380821 GOLGA6L22H0YM25 854 aa22.57■■□□□ 1.2
SNAPC3-202ENST00000380821 PPM1GO15355 546 aaPredicted RBP22.56■■□□□ 1.2
SNAPC3-202ENST00000380821 NCLP19338 710 aaKnown RBP22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms