RNA–Protein interactions for RNA: ENST00000420415.5

TFRC-203, Transcript of transferrin receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TFRC, Length 4,814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-203ENST00000420415 NISCHQ9Y2I1 1504 aa16.88■□□□□ 0.29
TFRC-203ENST00000420415 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
TFRC-203ENST00000420415 ABCC9O60706 1549 aa15.27■□□□□ 0.03
TFRC-203ENST00000420415 CCDC180Q9P1Z9 1646 aa14.82□□□□□ -0.04
TFRC-203ENST00000420415 RB1CC1Q8TDY2 1594 aa14.51□□□□□ -0.09
TFRC-203ENST00000420415 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
TFRC-203ENST00000420415 NACADO15069 1562 aa14.33□□□□□ -0.12
TFRC-203ENST00000420415 SHROOM4Q9ULL8 1493 aa14.09□□□□□ -0.15
TFRC-203ENST00000420415 SCRIBQ14160 1630 aa13.95□□□□□ -0.18
TFRC-203ENST00000420415 ZCCHC6Q5VYS8 1495 aaKnown RBP13.9□□□□□ -0.18
TFRC-203ENST00000420415 MYO15BQ96JP2 1530 aa13.89□□□□□ -0.19
TFRC-203ENST00000420415 DCAF1Q9Y4B6 1507 aa13.79□□□□□ -0.2
TFRC-203ENST00000420415 CECR2Q9BXF3 1484 aa13.74□□□□□ -0.21
TFRC-203ENST00000420415 FAM9AQ8IZU1 332 aaPredicted RBP13.74□□□□□ -0.21
TFRC-203ENST00000420415 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
TFRC-203ENST00000420415 SUPT5HO00267 1087 aaKnown RBP13.63□□□□□ -0.23
TFRC-203ENST00000420415 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
TFRC-203ENST00000420415 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
TFRC-203ENST00000420415 EIF4G1Q04637 1599 aaKnown RBP13.39□□□□□ -0.27
TFRC-203ENST00000420415 SMARCA2P51531 1590 aa13.39□□□□□ -0.27
TFRC-203ENST00000420415 PDS5BQ9NTI5 1447 aa13.37□□□□□ -0.27
TFRC-203ENST00000420415 FBLN2P98095 1184 aa13.35□□□□□ -0.27
TFRC-203ENST00000420415 CC2D2AQ9P2K1 1620 aa13.34□□□□□ -0.27
TFRC-203ENST00000420415 BAZ1AQ9NRL2 1556 aaPredicted RBP13.33□□□□□ -0.28
TFRC-203ENST00000420415 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
TFRC-203ENST00000420415 NCAPD3P42695 1498 aa13.17□□□□□ -0.3
TFRC-203ENST00000420415 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
TFRC-203ENST00000420415 TRIM41Q8WV44 630 aa13.15□□□□□ -0.3
TFRC-203ENST00000420415 NPM1P06748 294 aaKnown RBP eCLIP13.14□□□□□ -0.31
TFRC-203ENST00000420415 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
TFRC-203ENST00000420415 CHMP7Q8WUX9 453 aaPredicted RBP13.1□□□□□ -0.31
TFRC-203ENST00000420415 OSCARQ8IYS5 282 aa13.08□□□□□ -0.32
TFRC-203ENST00000420415 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
TFRC-203ENST00000420415 CEP164Q9UPV0 1460 aa13.03□□□□□ -0.32
TFRC-203ENST00000420415 SMARCA4P51532 1647 aa13.02□□□□□ -0.33
TFRC-203ENST00000420415 UNC13AQ9UPW8 1703 aa13.01□□□□□ -0.33
TFRC-203ENST00000420415 CUX2O14529 1486 aa13□□□□□ -0.33
TFRC-203ENST00000420415 HMGXB3Q12766 1538 aa12.99□□□□□ -0.33
TFRC-203ENST00000420415 TTBK1Q5TCY1 1321 aaPredicted RBP12.97□□□□□ -0.33
TFRC-203ENST00000420415 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
TFRC-203ENST00000420415 RSF1Q96T23 1441 aaPredicted RBP12.91□□□□□ -0.34
TFRC-203ENST00000420415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.9□□□□□ -0.34
TFRC-203ENST00000420415 HNRNPUL2Q1KMD3 747 aaKnown RBP12.9□□□□□ -0.34
TFRC-203ENST00000420415 MROH2BQ7Z745 1585 aa12.89□□□□□ -0.35
TFRC-203ENST00000420415 MRC2Q9UBG0 1479 aa12.89□□□□□ -0.35
TFRC-203ENST00000420415 FANCD2Q9BXW9 1451 aa12.89□□□□□ -0.35
TFRC-203ENST00000420415 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
TFRC-203ENST00000420415 LAMC3Q9Y6N6 1575 aa12.86□□□□□ -0.35
TFRC-203ENST00000420415 AEBP2Q6ZN18 517 aaPredicted RBP12.86□□□□□ -0.35
TFRC-203ENST00000420415 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.35
TFRC-203ENST00000420415 MYT1LQ9UL68 1186 aa12.82□□□□□ -0.36
TFRC-203ENST00000420415 APLP2Q06481 763 aa12.79□□□□□ -0.36
TFRC-203ENST00000420415 NESP48681 1621 aa12.78□□□□□ -0.36
TFRC-203ENST00000420415 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
TFRC-203ENST00000420415 CYB5RLQ6IPT4 315 aa12.77□□□□□ -0.37
TFRC-203ENST00000420415 RANGAP1P46060 587 aaPredicted RBP12.75□□□□□ -0.37
TFRC-203ENST00000420415 UBTFP17480 764 aaKnown RBP12.74□□□□□ -0.37
TFRC-203ENST00000420415 SOGA1O94964 1423 aa12.73□□□□□ -0.37
TFRC-203ENST00000420415 IFT140Q96RY7 1462 aa12.7□□□□□ -0.38
TFRC-203ENST00000420415 WRNQ14191 1432 aaPredicted RBP eCLIP12.7□□□□□ -0.388e-9■■■■□ 20.1
TFRC-203ENST00000420415 EHMT2Q96KQ7 1210 aa12.69□□□□□ -0.38
TFRC-203ENST00000420415 CCDC88BA6NC98 1476 aa12.66□□□□□ -0.38
TFRC-203ENST00000420415 CFTRP13569 1480 aa12.66□□□□□ -0.38
TFRC-203ENST00000420415 WIZO95785 1651 aa12.65□□□□□ -0.38
TFRC-203ENST00000420415 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
TFRC-203ENST00000420415 PEG3Q9GZU2 1588 aa12.59□□□□□ -0.39
TFRC-203ENST00000420415 ESF1Q9H501 851 aaKnown RBP12.59□□□□□ -0.39
TFRC-203ENST00000420415 CDK11AQ9UQ88 783 aaPredicted RBP12.58□□□□□ -0.4
TFRC-203ENST00000420415 KIF27Q86VH2 1401 aa12.57□□□□□ -0.4
TFRC-203ENST00000420415 CARMIL2Q6F5E8 1435 aa12.55□□□□□ -0.4
TFRC-203ENST00000420415 GRIN2BQ13224 1484 aa12.5□□□□□ -0.41
TFRC-203ENST00000420415 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
TFRC-203ENST00000420415 AQRO60306 1485 aaKnown RBP eCLIP12.46□□□□□ -0.411e-8■■■■■ 27.5
TFRC-203ENST00000420415 GAPVD1Q14C86 1478 aa12.46□□□□□ -0.42
TFRC-203ENST00000420415 JPH4Q96JJ6 628 aa12.45□□□□□ -0.42
TFRC-203ENST00000420415 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
TFRC-203ENST00000420415 FGD5Q6ZNL6 1462 aa12.43□□□□□ -0.42
TFRC-203ENST00000420415 ARID4BQ4LE39 1312 aaPredicted RBP12.41□□□□□ -0.42
TFRC-203ENST00000420415 WDR62O43379 1518 aa12.41□□□□□ -0.42
TFRC-203ENST00000420415 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
TFRC-203ENST00000420415 KCNH8Q96L42 1107 aa12.4□□□□□ -0.43
TFRC-203ENST00000420415 FAM69CQ0P6D2 419 aa12.38□□□□□ -0.43
TFRC-203ENST00000420415 CARMIL1Q5VZK9 1371 aa12.37□□□□□ -0.43
TFRC-203ENST00000420415 PLEKHD1A6NEE1 506 aa12.37□□□□□ -0.43
TFRC-203ENST00000420415 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
TFRC-203ENST00000420415 P3H3Q8IVL6 736 aa12.37□□□□□ -0.43
TFRC-203ENST00000420415 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
TFRC-203ENST00000420415 RAD54L2Q9Y4B4 1467 aa12.36□□□□□ -0.43
TFRC-203ENST00000420415 ARID3CA6NKF2 412 aa12.36□□□□□ -0.43
TFRC-203ENST00000420415 FHAD1B1AJZ9 1412 aa12.36□□□□□ -0.43
TFRC-203ENST00000420415 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
TFRC-203ENST00000420415 SNAPC4Q5SXM2 1469 aa12.35□□□□□ -0.43
TFRC-203ENST00000420415 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
TFRC-203ENST00000420415 PTPRGP23470 1445 aa12.33□□□□□ -0.44
TFRC-203ENST00000420415 SYNJ2O15056 1496 aa12.32□□□□□ -0.44
TFRC-203ENST00000420415 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
TFRC-203ENST00000420415 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
TFRC-203ENST00000420415 EEA1Q15075 1411 aa12.27□□□□□ -0.45
TFRC-203ENST00000420415 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
TFRC-203ENST00000420415 GOLGA3Q08378 1498 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms