RNA–Protein interactions for RNA: ENST00000524440.1

TKFC-202, Transcript of triokinase and FMN cyclase, humanhuman

TSL 2

Gene TKFC, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TKFC-202ENST00000524440 NISCHQ9Y2I1 1504 aa43.79■■■■■ 4.6
TKFC-202ENST00000524440 CCDC180Q9P1Z9 1646 aa39.06■■■■□ 3.84
TKFC-202ENST00000524440 ABCC9O60706 1549 aa38.26■■■■□ 3.72
TKFC-202ENST00000524440 RB1CC1Q8TDY2 1594 aa36.79■■■■□ 3.48
TKFC-202ENST00000524440 NACADO15069 1562 aa36.74■■■■□ 3.47
TKFC-202ENST00000524440 MYO15BQ96JP2 1530 aa36.54■■■■□ 3.44
TKFC-202ENST00000524440 ZCCHC6Q5VYS8 1495 aaKnown RBP36.47■■■■□ 3.43
TKFC-202ENST00000524440 DCAF8L2P0C7V8 631 aa36.41■■■■□ 3.42
TKFC-202ENST00000524440 DCAF1Q9Y4B6 1507 aa36.3■■■■□ 3.4
TKFC-202ENST00000524440 UNC13AQ9UPW8 1703 aa35.98■■■■□ 3.35
TKFC-202ENST00000524440 BICRAQ9NZM4 1560 aa35.74■■■■□ 3.31
TKFC-202ENST00000524440 PABPN1Q86U42 306 aaKnown RBP eCLIP35.67■■■■□ 3.34e-8■■■□□ 17.1
TKFC-202ENST00000524440 SCRIBQ14160 1630 aa35.51■■■■□ 3.28
TKFC-202ENST00000524440 SHROOM4Q9ULL8 1493 aa35.39■■■■□ 3.26
TKFC-202ENST00000524440 DNAJC5BQ9UF47 199 aa35.32■■■■□ 3.24
TKFC-202ENST00000524440 EIF4G1Q04637 1599 aaKnown RBP34.77■■■■□ 3.16
TKFC-202ENST00000524440 CC2D2AQ9P2K1 1620 aa34.66■■■■□ 3.14
TKFC-202ENST00000524440 CECR2Q9BXF3 1484 aa34.43■■■■□ 3.1
TKFC-202ENST00000524440 SMARCA4P51532 1647 aa34.01■■■■□ 3.04
TKFC-202ENST00000524440 BAZ1AQ9NRL2 1556 aaPredicted RBP33.94■■■■□ 3.02
TKFC-202ENST00000524440 NCAPD3P42695 1498 aa33.91■■■■□ 3.02
TKFC-202ENST00000524440 ATAD2BQ9ULI0 1458 aa33.88■■■■□ 3.01
TKFC-202ENST00000524440 SMARCA2P51531 1590 aa33.82■■■■□ 3
TKFC-202ENST00000524440 PEG3Q9GZU2 1588 aa33.77■■■■□ 3
TKFC-202ENST00000524440 HMGXB3Q12766 1538 aa33.74■■■□□ 2.99
TKFC-202ENST00000524440 MROH2BQ7Z745 1585 aa33.72■■■□□ 2.99
TKFC-202ENST00000524440 BAZ1BQ9UIG0 1483 aaKnown RBP33.54■■■□□ 2.96
TKFC-202ENST00000524440 WIZO95785 1651 aa33.33■■■□□ 2.93
TKFC-202ENST00000524440 RSF1Q96T23 1441 aaPredicted RBP33.28■■■□□ 2.92
TKFC-202ENST00000524440 NESP48681 1621 aa33.09■■■□□ 2.89
TKFC-202ENST00000524440 LAMC3Q9Y6N6 1575 aa33.03■■■□□ 2.88
TKFC-202ENST00000524440 TOP2AP11388 1531 aaKnown RBP33.01■■■□□ 2.87
TKFC-202ENST00000524440 ERCC6Q03468 1493 aa32.96■■■□□ 2.87
TKFC-202ENST00000524440 CADPSQ9ULU8 1353 aa32.86■■■□□ 2.85
TKFC-202ENST00000524440 CUX2O14529 1486 aa32.8■■■□□ 2.84
TKFC-202ENST00000524440 PDS5BQ9NTI5 1447 aa32.77■■■□□ 2.84
TKFC-202ENST00000524440 SUPT5HO00267 1087 aaKnown RBP32.72■■■□□ 2.83
TKFC-202ENST00000524440 KIF21AQ7Z4S6 1674 aa32.7■■■□□ 2.83
TKFC-202ENST00000524440 THOC2Q8NI27 1593 aaKnown RBP32.7■■■□□ 2.82
TKFC-202ENST00000524440 CFTRP13569 1480 aa32.67■■■□□ 2.82
TKFC-202ENST00000524440 CCDC88BA6NC98 1476 aa32.6■■■□□ 2.81
TKFC-202ENST00000524440 FANCD2Q9BXW9 1451 aa32.48■■■□□ 2.79
TKFC-202ENST00000524440 MRC2Q9UBG0 1479 aa32.46■■■□□ 2.79
TKFC-202ENST00000524440 CEP164Q9UPV0 1460 aa32.45■■■□□ 2.79
TKFC-202ENST00000524440 WDR62O43379 1518 aa32.41■■■□□ 2.78
TKFC-202ENST00000524440 PRDM2Q13029 1718 aa32.4■■■□□ 2.78
TKFC-202ENST00000524440 URB2Q14146 1524 aaKnown RBP32.19■■■□□ 2.74
TKFC-202ENST00000524440 TOPBP1Q92547 1522 aa31.96■■■□□ 2.71
TKFC-202ENST00000524440 DNAJC5Q9H3Z4 198 aa31.96■■■□□ 2.71
TKFC-202ENST00000524440 ABCC8Q09428 1581 aa31.94■■■□□ 2.7
TKFC-202ENST00000524440 DNMBPQ6XZF7 1577 aa31.91■■■□□ 2.7
TKFC-202ENST00000524440 IFT140Q96RY7 1462 aa31.8■■■□□ 2.68
TKFC-202ENST00000524440 POLA1P09884 1462 aaPredicted RBP31.67■■■□□ 2.66
TKFC-202ENST00000524440 ZNF608Q9ULD9 1512 aaPredicted RBP31.66■■■□□ 2.66
TKFC-202ENST00000524440 TARBP1Q13395 1621 aaKnown RBP31.66■■■□□ 2.66
TKFC-202ENST00000524440 CUX1P39880 1505 aa31.65■■■□□ 2.66
TKFC-202ENST00000524440 FGD5Q6ZNL6 1462 aa31.55■■■□□ 2.64
TKFC-202ENST00000524440 EIF4G3O43432 1585 aaKnown RBP31.55■■■□□ 2.64
TKFC-202ENST00000524440 SOGA1O94964 1423 aa31.5■■■□□ 2.63
TKFC-202ENST00000524440 RAD54L2Q9Y4B4 1467 aa31.5■■■□□ 2.63
TKFC-202ENST00000524440 WDR97A6NE52 1622 aa31.43■■■□□ 2.62
TKFC-202ENST00000524440 AQRO60306 1485 aaKnown RBP eCLIP31.43■■■□□ 2.624e-8■■■■■ 34.1
TKFC-202ENST00000524440 BIVM-ERCC5R4GMW8 1640 aa31.36■■■□□ 2.61
TKFC-202ENST00000524440 WRNQ14191 1432 aaPredicted RBP eCLIP31.35■■■□□ 2.61
TKFC-202ENST00000524440 TOP2BQ02880 1626 aa31.35■■■□□ 2.61
TKFC-202ENST00000524440 TDRD9Q8NDG6 1382 aaKnown RBP31.32■■■□□ 2.6
TKFC-202ENST00000524440 SYNJ1O43426 1573 aa31.31■■■□□ 2.6
TKFC-202ENST00000524440 OSCARQ8IYS5 282 aa31.3■■■□□ 2.6
TKFC-202ENST00000524440 ABCA10Q8WWZ4 1543 aa31.29■■■□□ 2.6
TKFC-202ENST00000524440 ABCA5Q8WWZ7 1642 aa31.19■■■□□ 2.58
TKFC-202ENST00000524440 GRIN2BQ13224 1484 aa31.18■■■□□ 2.58
TKFC-202ENST00000524440 CHD1O14646 1710 aa31.16■■■□□ 2.58
TKFC-202ENST00000524440 SNAPC4Q5SXM2 1469 aa31.15■■■□□ 2.58
TKFC-202ENST00000524440 GAPVD1Q14C86 1478 aa31.14■■■□□ 2.58
TKFC-202ENST00000524440 MAGI1Q96QZ7 1491 aaPredicted RBP31.14■■■□□ 2.57
TKFC-202ENST00000524440 PBRM1Q86U86 1689 aa31.11■■■□□ 2.57
TKFC-202ENST00000524440 SYNJ2O15056 1496 aa31.01■■■□□ 2.56
TKFC-202ENST00000524440 FBLN2P98095 1184 aa30.96■■■□□ 2.55
TKFC-202ENST00000524440 TRIM41Q8WV44 630 aa30.93■■■□□ 2.54
TKFC-202ENST00000524440 CHMP7Q8WUX9 453 aaPredicted RBP30.91■■■□□ 2.54
TKFC-202ENST00000524440 ERICH3Q5RHP9 1530 aa30.9■■■□□ 2.54
TKFC-202ENST00000524440 RIMBP3CA6NJZ7 1639 aa30.89■■■□□ 2.54
TKFC-202ENST00000524440 RIMBP3BA6NNM3 1639 aa30.89■■■□□ 2.54
TKFC-202ENST00000524440 RIMBP3Q9UFD9 1639 aa30.89■■■□□ 2.54
TKFC-202ENST00000524440 CLASP1Q7Z460 1538 aa30.88■■■□□ 2.53
TKFC-202ENST00000524440 ADAMTS12P58397 1594 aa30.88■■■□□ 2.53
TKFC-202ENST00000524440 CHIC1Q5VXU3 224 aa30.87■■■□□ 2.53
TKFC-202ENST00000524440 ARHGEF11O15085 1522 aa30.87■■■□□ 2.53
TKFC-202ENST00000524440 FHAD1B1AJZ9 1412 aa30.8■■■□□ 2.52
TKFC-202ENST00000524440 GRIN2AQ12879 1464 aa30.79■■■□□ 2.52
TKFC-202ENST00000524440 NUP160Q12769 1436 aa30.7■■■□□ 2.5
TKFC-202ENST00000524440 KIF27Q86VH2 1401 aa30.7■■■□□ 2.5
TKFC-202ENST00000524440 CEP170Q5SW79 1584 aa30.66■■■□□ 2.5
TKFC-202ENST00000524440 IGF1RP08069 1367 aa30.63■■■□□ 2.49
TKFC-202ENST00000524440 ARAP1Q96P48 1450 aa30.62■■■□□ 2.49
TKFC-202ENST00000524440 CUL7Q14999 1698 aa30.57■■■□□ 2.48
TKFC-202ENST00000524440 SHROOM2Q13796 1616 aa30.51■■■□□ 2.48
TKFC-202ENST00000524440 CYB5RLQ6IPT4 315 aa30.48■■■□□ 2.47
TKFC-202ENST00000524440 RUSC2Q8N2Y8 1516 aa30.44■■■□□ 2.46
TKFC-202ENST00000524440 EEA1Q15075 1411 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms