RNA–Protein interactions for RNA: ENST00000360110.8

TFRC-201, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,111 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-201ENST00000360110 SUPT5HO00267 1087 aaKnown RBP15.2■□□□□ 0.02
TFRC-201ENST00000360110 PCGF6Q9BYE7 350 aa15.04■□□□□ -0
TFRC-201ENST00000360110 NISCHQ9Y2I1 1504 aa15.04■□□□□ -0
TFRC-201ENST00000360110 SHROOM4Q9ULL8 1493 aa14.99□□□□□ -0.01
TFRC-201ENST00000360110 DCAF8L2P0C7V8 631 aa14.87□□□□□ -0.03
TFRC-201ENST00000360110 PPARGC1BQ86YN6 1023 aaKnown RBP14.82□□□□□ -0.04
TFRC-201ENST00000360110 EHMT2Q96KQ7 1210 aa14.74□□□□□ -0.05
TFRC-201ENST00000360110 HRCP23327 699 aa14.72□□□□□ -0.05
TFRC-201ENST00000360110 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
TFRC-201ENST00000360110 TTBK1Q5TCY1 1321 aaPredicted RBP14.32□□□□□ -0.12
TFRC-201ENST00000360110 FAM9AQ8IZU1 332 aaPredicted RBP14.31□□□□□ -0.12
TFRC-201ENST00000360110 YTHDC1Q96MU7 727 aaKnown RBP14.26□□□□□ -0.13
TFRC-201ENST00000360110 LOC105371045A0A1W2PR82 267 aa14.23□□□□□ -0.13
TFRC-201ENST00000360110 CENPBP07199 599 aaPredicted RBP14.17□□□□□ -0.14
TFRC-201ENST00000360110 MYT1Q01538 1121 aa14.15□□□□□ -0.14
TFRC-201ENST00000360110 ZEB1P37275 1124 aaPredicted RBP14.1□□□□□ -0.15
TFRC-201ENST00000360110 CCER1Q8TC90 406 aaPredicted RBP14.09□□□□□ -0.15
TFRC-201ENST00000360110 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
TFRC-201ENST00000360110 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
TFRC-201ENST00000360110 SCAF1Q9H7N4 1312 aaKnown RBP14.02□□□□□ -0.16
TFRC-201ENST00000360110 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
TFRC-201ENST00000360110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
TFRC-201ENST00000360110 TRIM41Q8WV44 630 aa13.8□□□□□ -0.2
TFRC-201ENST00000360110 ACIN1Q9UKV3 1341 aaKnown RBP13.79□□□□□ -0.2
TFRC-201ENST00000360110 DIEXFQ68CQ4 756 aaKnown RBP13.79□□□□□ -0.2
TFRC-201ENST00000360110 NEUROD1Q13562 356 aa13.77□□□□□ -0.2
TFRC-201ENST00000360110 RANGAP1P46060 587 aaPredicted RBP13.66□□□□□ -0.22
TFRC-201ENST00000360110 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
TFRC-201ENST00000360110 MYO15BQ96JP2 1530 aa13.65□□□□□ -0.22
TFRC-201ENST00000360110 BCANQ96GW7 911 aa13.55□□□□□ -0.24
TFRC-201ENST00000360110 APLP2Q06481 763 aa13.48□□□□□ -0.25
TFRC-201ENST00000360110 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
TFRC-201ENST00000360110 UBTFP17480 764 aaKnown RBP13.42□□□□□ -0.26
TFRC-201ENST00000360110 NEFLP07196 543 aa13.41□□□□□ -0.26
TFRC-201ENST00000360110 ZNF316A6NFI3 1004 aaPredicted RBP13.32□□□□□ -0.28
TFRC-201ENST00000360110 DCAF1Q9Y4B6 1507 aa13.32□□□□□ -0.28
TFRC-201ENST00000360110 MIER1Q8N108 512 aa13.26□□□□□ -0.29
TFRC-201ENST00000360110 ITGAEP38570 1179 aa13.25□□□□□ -0.29
TFRC-201ENST00000360110 BCL11AQ9H165 835 aa13.22□□□□□ -0.29
TFRC-201ENST00000360110 CNGB1Q14028 1251 aaPredicted RBP13.14□□□□□ -0.31
TFRC-201ENST00000360110 ANP32EQ9BTT0 268 aa13.12□□□□□ -0.31
TFRC-201ENST00000360110 FKBP8Q14318 412 aa13.11□□□□□ -0.31
TFRC-201ENST00000360110 ATP1B4Q9UN42 357 aaPredicted RBP13.08□□□□□ -0.32
TFRC-201ENST00000360110 CSRNP3Q8WYN3 585 aa13.02□□□□□ -0.33
TFRC-201ENST00000360110 CCDC180Q9P1Z9 1646 aa13.01□□□□□ -0.33
TFRC-201ENST00000360110 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
TFRC-201ENST00000360110 NBR1Q14596 966 aa12.96□□□□□ -0.33
TFRC-201ENST00000360110 RTL5Q5HYW3 569 aaPredicted RBP12.96□□□□□ -0.33
TFRC-201ENST00000360110 IRX6P78412 446 aaPredicted RBP12.94□□□□□ -0.34
TFRC-201ENST00000360110 TRIM52Q96A61 297 aa12.94□□□□□ -0.34
TFRC-201ENST00000360110 CDK11AQ9UQ88 783 aaPredicted RBP12.93□□□□□ -0.34
TFRC-201ENST00000360110 POLR3GLQ9BT43 218 aa12.89□□□□□ -0.35
TFRC-201ENST00000360110 EIF5BO60841 1220 aaKnown RBP12.88□□□□□ -0.35
TFRC-201ENST00000360110 TSHZ2Q9NRE2 1034 aa12.87□□□□□ -0.35
TFRC-201ENST00000360110 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
TFRC-201ENST00000360110 HIRIP3Q9BW71 556 aaPredicted RBP12.84□□□□□ -0.35
TFRC-201ENST00000360110 RTN4Q9NQC3 1192 aaKnown RBP12.83□□□□□ -0.36
TFRC-201ENST00000360110 NPM2Q86SE8 214 aaKnown RBP12.79□□□□□ -0.36
TFRC-201ENST00000360110 ANP32CO43423 234 aa12.79□□□□□ -0.36
TFRC-201ENST00000360110 DAXXQ9UER7 740 aaPredicted RBP12.76□□□□□ -0.37
TFRC-201ENST00000360110 RBM19Q9Y4C8 960 aaKnown RBP12.75□□□□□ -0.37
TFRC-201ENST00000360110 CLSPNQ9HAW4 1339 aa12.74□□□□□ -0.37
TFRC-201ENST00000360110 HNRNPUQ00839 825 aaKnown RBP eCLIP12.72□□□□□ -0.37
TFRC-201ENST00000360110 FAM50AQ14320 339 aaKnown RBP12.71□□□□□ -0.37
TFRC-201ENST00000360110 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
TFRC-201ENST00000360110 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
TFRC-201ENST00000360110 DEKP35659 375 aaKnown RBP12.66□□□□□ -0.38
TFRC-201ENST00000360110 ANP32AP39687 249 aaKnown RBP12.64□□□□□ -0.39
TFRC-201ENST00000360110 CCDC136Q96JN2 1154 aa12.64□□□□□ -0.39
TFRC-201ENST00000360110 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
TFRC-201ENST00000360110 ZCCHC6Q5VYS8 1495 aaKnown RBP12.61□□□□□ -0.39
TFRC-201ENST00000360110 FAM9BQ8IZU0 186 aa12.61□□□□□ -0.39
TFRC-201ENST00000360110 ABCC9O60706 1549 aa12.57□□□□□ -0.4
TFRC-201ENST00000360110 ZBTB47Q9UFB7 747 aaPredicted RBP12.56□□□□□ -0.4
TFRC-201ENST00000360110 PABPN1Q86U42 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
TFRC-201ENST00000360110 ARXQ96QS3 562 aa12.55□□□□□ -0.4
TFRC-201ENST00000360110 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
TFRC-201ENST00000360110 B4GALNT3Q6L9W6 998 aa12.52□□□□□ -0.41
TFRC-201ENST00000360110 SALL2Q9Y467 1007 aaPredicted RBP12.51□□□□□ -0.41
TFRC-201ENST00000360110 LAS1LQ9Y4W2 734 aaKnown RBP12.51□□□□□ -0.41
TFRC-201ENST00000360110 CEP162Q5TB80 1403 aa12.51□□□□□ -0.41
TFRC-201ENST00000360110 MYT1LQ9UL68 1186 aa12.48□□□□□ -0.41
TFRC-201ENST00000360110 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
TFRC-201ENST00000360110 ANO8Q9HCE9 1232 aaPredicted RBP12.48□□□□□ -0.41
TFRC-201ENST00000360110 NOP58Q9Y2X3 529 aaKnown RBP12.46□□□□□ -0.42
TFRC-201ENST00000360110 P3H3Q8IVL6 736 aa12.45□□□□□ -0.42
TFRC-201ENST00000360110 SIN3AQ96ST3 1273 aa12.44□□□□□ -0.42
TFRC-201ENST00000360110 RSF1Q96T23 1441 aaPredicted RBP12.39□□□□□ -0.43
TFRC-201ENST00000360110 SCRIBQ14160 1630 aa12.39□□□□□ -0.43
TFRC-201ENST00000360110 NEFMP07197 916 aa12.39□□□□□ -0.43
TFRC-201ENST00000360110 MRS2Q9HD23 443 aa12.39□□□□□ -0.43
TFRC-201ENST00000360110 TONSLQ96HA7 1378 aa12.34□□□□□ -0.43
TFRC-201ENST00000360110 PPP4R2Q9NY27 417 aa12.32□□□□□ -0.44
TFRC-201ENST00000360110 CLIP1P30622 1438 aa12.31□□□□□ -0.44
TFRC-201ENST00000360110 MSH5O43196 834 aa12.31□□□□□ -0.44
TFRC-201ENST00000360110 ARID3CA6NKF2 412 aa12.29□□□□□ -0.44
TFRC-201ENST00000360110 SOGA1O94964 1423 aa12.27□□□□□ -0.44
TFRC-201ENST00000360110 IL27Q8NEV9 243 aa12.27□□□□□ -0.45
TFRC-201ENST00000360110 ARID4BQ4LE39 1312 aaPredicted RBP12.25□□□□□ -0.45
TFRC-201ENST00000360110 RB1CC1Q8TDY2 1594 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms