RNA–Protein interactions for RNA: ENST00000248484.8

TNFRSF19-201, Transcript of TNF receptor superfamily member 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF19, Length 3,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF19-201ENST00000248484 NISCHQ9Y2I1 1504 aa19.67■□□□□ 0.74
TNFRSF19-201ENST00000248484 DCAF8L2P0C7V8 631 aa17.49■□□□□ 0.39
TNFRSF19-201ENST00000248484 SHROOM4Q9ULL8 1493 aa17.19■□□□□ 0.34
TNFRSF19-201ENST00000248484 SUPT5HO00267 1087 aaKnown RBP16.7■□□□□ 0.26
TNFRSF19-201ENST00000248484 CCDC180Q9P1Z9 1646 aa16.6■□□□□ 0.25
TNFRSF19-201ENST00000248484 ABCC9O60706 1549 aa16.56■□□□□ 0.24
TNFRSF19-201ENST00000248484 ZCCHC6Q5VYS8 1495 aaKnown RBP16.45■□□□□ 0.22
TNFRSF19-201ENST00000248484 SCRIBQ14160 1630 aa16.02■□□□□ 0.16
TNFRSF19-201ENST00000248484 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
TNFRSF19-201ENST00000248484 DCAF1Q9Y4B6 1507 aa15.81■□□□□ 0.12
TNFRSF19-201ENST00000248484 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
TNFRSF19-201ENST00000248484 NACADO15069 1562 aa15.66■□□□□ 0.1
TNFRSF19-201ENST00000248484 PCGF6Q9BYE7 350 aa15.66■□□□□ 0.1
TNFRSF19-201ENST00000248484 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
TNFRSF19-201ENST00000248484 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
TNFRSF19-201ENST00000248484 CHIC1Q5VXU3 224 aa15.61■□□□□ 0.09
TNFRSF19-201ENST00000248484 HRCP23327 699 aa15.58■□□□□ 0.09
TNFRSF19-201ENST00000248484 FAM9AQ8IZU1 332 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF19-201ENST00000248484 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
TNFRSF19-201ENST00000248484 RSF1Q96T23 1441 aaPredicted RBP15.52■□□□□ 0.07
TNFRSF19-201ENST00000248484 MYO15BQ96JP2 1530 aa15.51■□□□□ 0.07
TNFRSF19-201ENST00000248484 LOC105371045A0A1W2PR82 267 aa15.41■□□□□ 0.06
TNFRSF19-201ENST00000248484 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
TNFRSF19-201ENST00000248484 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
TNFRSF19-201ENST00000248484 WIZO95785 1651 aa15.26■□□□□ 0.03
TNFRSF19-201ENST00000248484 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
TNFRSF19-201ENST00000248484 BAZ1AQ9NRL2 1556 aaPredicted RBP15.13■□□□□ 0.01
TNFRSF19-201ENST00000248484 BICRAQ9NZM4 1560 aa15.13■□□□□ 0.01
TNFRSF19-201ENST00000248484 RANGAP1P46060 587 aaPredicted RBP15.06■□□□□ 0
TNFRSF19-201ENST00000248484 SMARCA4P51532 1647 aa15.03■□□□□ -0
TNFRSF19-201ENST00000248484 TTBK1Q5TCY1 1321 aaPredicted RBP15.02■□□□□ -0
TNFRSF19-201ENST00000248484 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
TNFRSF19-201ENST00000248484 TRIM26Q12899 539 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF19-201ENST00000248484 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
TNFRSF19-201ENST00000248484 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
TNFRSF19-201ENST00000248484 ATAD2BQ9ULI0 1458 aa14.9□□□□□ -0.02
TNFRSF19-201ENST00000248484 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
TNFRSF19-201ENST00000248484 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
TNFRSF19-201ENST00000248484 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
TNFRSF19-201ENST00000248484 SMARCA2P51531 1590 aa14.8□□□□□ -0.04
TNFRSF19-201ENST00000248484 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
TNFRSF19-201ENST00000248484 SOGA1O94964 1423 aa14.73□□□□□ -0.05
TNFRSF19-201ENST00000248484 ZEB1P37275 1124 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF19-201ENST00000248484 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
TNFRSF19-201ENST00000248484 RUSC2Q8N2Y8 1516 aa14.68□□□□□ -0.06
TNFRSF19-201ENST00000248484 WRNQ14191 1432 aaPredicted RBP eCLIP14.68□□□□□ -0.06
TNFRSF19-201ENST00000248484 SCAF1Q9H7N4 1312 aaKnown RBP14.67□□□□□ -0.06
TNFRSF19-201ENST00000248484 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.62□□□□□ -0.07
TNFRSF19-201ENST00000248484 NCAPD3P42695 1498 aa14.59□□□□□ -0.07
TNFRSF19-201ENST00000248484 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
TNFRSF19-201ENST00000248484 CCER1Q8TC90 406 aaPredicted RBP14.57□□□□□ -0.08
TNFRSF19-201ENST00000248484 PEG3Q9GZU2 1588 aa14.52□□□□□ -0.09
TNFRSF19-201ENST00000248484 NESP48681 1621 aa14.51□□□□□ -0.09
TNFRSF19-201ENST00000248484 ATP1B4Q9UN42 357 aaPredicted RBP14.51□□□□□ -0.09
TNFRSF19-201ENST00000248484 PELP1Q8IZL8 1130 aaKnown RBP14.47□□□□□ -0.09
TNFRSF19-201ENST00000248484 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
TNFRSF19-201ENST00000248484 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
TNFRSF19-201ENST00000248484 P3H3Q8IVL6 736 aa14.46□□□□□ -0.09
TNFRSF19-201ENST00000248484 NEUROD1Q13562 356 aa14.42□□□□□ -0.1
TNFRSF19-201ENST00000248484 APLP2Q06481 763 aa14.41□□□□□ -0.1
TNFRSF19-201ENST00000248484 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
TNFRSF19-201ENST00000248484 CFTRP13569 1480 aa14.37□□□□□ -0.11
TNFRSF19-201ENST00000248484 YTHDC1Q96MU7 727 aaKnown RBP14.37□□□□□ -0.11
TNFRSF19-201ENST00000248484 CEP162Q5TB80 1403 aa14.37□□□□□ -0.11
TNFRSF19-201ENST00000248484 GTF3C3Q9Y5Q9 886 aa14.35□□□□□ -0.11
TNFRSF19-201ENST00000248484 ACIN1Q9UKV3 1341 aaKnown RBP14.35□□□□□ -0.11
TNFRSF19-201ENST00000248484 DIEXFQ68CQ4 756 aaKnown RBP14.35□□□□□ -0.11
TNFRSF19-201ENST00000248484 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
TNFRSF19-201ENST00000248484 CUX2O14529 1486 aa14.33□□□□□ -0.12
TNFRSF19-201ENST00000248484 RAPGEF2Q9Y4G8 1499 aa14.32□□□□□ -0.12
TNFRSF19-201ENST00000248484 CUX1P39880 1505 aa14.32□□□□□ -0.12
TNFRSF19-201ENST00000248484 HNRNPUL2Q1KMD3 747 aaKnown RBP14.31□□□□□ -0.12
TNFRSF19-201ENST00000248484 TDRD9Q8NDG6 1382 aaKnown RBP14.3□□□□□ -0.12
TNFRSF19-201ENST00000248484 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
TNFRSF19-201ENST00000248484 FBLN2P98095 1184 aa14.29□□□□□ -0.12
TNFRSF19-201ENST00000248484 GOLGA3Q08378 1498 aa14.29□□□□□ -0.12
TNFRSF19-201ENST00000248484 ARID3CA6NKF2 412 aa14.28□□□□□ -0.12
TNFRSF19-201ENST00000248484 CENPBP07199 599 aaPredicted RBP14.27□□□□□ -0.12
TNFRSF19-201ENST00000248484 ITGAEP38570 1179 aa14.27□□□□□ -0.12
TNFRSF19-201ENST00000248484 KIF27Q86VH2 1401 aa14.27□□□□□ -0.13
TNFRSF19-201ENST00000248484 TNIKQ9UKE5 1360 aa14.27□□□□□ -0.13
TNFRSF19-201ENST00000248484 CLIP1P30622 1438 aa14.25□□□□□ -0.13
TNFRSF19-201ENST00000248484 EEA1Q15075 1411 aa14.25□□□□□ -0.13
TNFRSF19-201ENST00000248484 FGD5Q6ZNL6 1462 aa14.24□□□□□ -0.13
TNFRSF19-201ENST00000248484 CEP164Q9UPV0 1460 aa14.23□□□□□ -0.13
TNFRSF19-201ENST00000248484 TOP2BQ02880 1626 aa14.2□□□□□ -0.14
TNFRSF19-201ENST00000248484 CARMIL1Q5VZK9 1371 aa14.18□□□□□ -0.14
TNFRSF19-201ENST00000248484 PDS5BQ9NTI5 1447 aa14.17□□□□□ -0.14
TNFRSF19-201ENST00000248484 IGF1RP08069 1367 aa14.16□□□□□ -0.14
TNFRSF19-201ENST00000248484 ERCC6Q03468 1493 aa14.15□□□□□ -0.14
TNFRSF19-201ENST00000248484 TOPBP1Q92547 1522 aa14.11□□□□□ -0.15
TNFRSF19-201ENST00000248484 KANK4Q5T7N3 995 aaPredicted RBP14.1□□□□□ -0.15
TNFRSF19-201ENST00000248484 POLA1P09884 1462 aaPredicted RBP14.1□□□□□ -0.15
TNFRSF19-201ENST00000248484 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
TNFRSF19-201ENST00000248484 AQRO60306 1485 aaKnown RBP eCLIP14.07□□□□□ -0.163e-6■■■■□ 24.7
TNFRSF19-201ENST00000248484 ZNF316A6NFI3 1004 aaPredicted RBP14.06□□□□□ -0.16
TNFRSF19-201ENST00000248484 BIVM-ERCC5R4GMW8 1640 aa14.04□□□□□ -0.16
TNFRSF19-201ENST00000248484 MIER1Q8N108 512 aa14.02□□□□□ -0.16
TNFRSF19-201ENST00000248484 PRXQ9BXM0 1461 aa14.02□□□□□ -0.16
TNFRSF19-201ENST00000248484 FAM50AQ14320 339 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms