RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-205ENST00000463675 NISCHQ9Y2I1 1504 aa37.05■■■■□ 3.52
SNU13-205ENST00000463675 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
SNU13-205ENST00000463675 ABCC9O60706 1549 aa32.35■■■□□ 2.77
SNU13-205ENST00000463675 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
SNU13-205ENST00000463675 NACADO15069 1562 aa30.96■■■□□ 2.55
SNU13-205ENST00000463675 DCAF8L2P0C7V8 631 aa30.94■■■□□ 2.54
SNU13-205ENST00000463675 ZCCHC6Q5VYS8 1495 aaKnown RBP30.91■■■□□ 2.54
SNU13-205ENST00000463675 MYO15BQ96JP2 1530 aa30.7■■■□□ 2.51
SNU13-205ENST00000463675 DCAF1Q9Y4B6 1507 aa30.6■■■□□ 2.49
SNU13-205ENST00000463675 UNC13AQ9UPW8 1703 aa30.48■■■□□ 2.47
SNU13-205ENST00000463675 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
SNU13-205ENST00000463675 PABPN1Q86U42 306 aaKnown RBP eCLIP30.16■■■□□ 2.42
SNU13-205ENST00000463675 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
SNU13-205ENST00000463675 SHROOM4Q9ULL8 1493 aa29.72■■■□□ 2.35
SNU13-205ENST00000463675 DNAJC5BQ9UF47 199 aa29.6■■■□□ 2.33
SNU13-205ENST00000463675 EIF4G1Q04637 1599 aaKnown RBP29.35■■■□□ 2.29
SNU13-205ENST00000463675 CC2D2AQ9P2K1 1620 aa29.26■■■□□ 2.27
SNU13-205ENST00000463675 CECR2Q9BXF3 1484 aa29.02■■■□□ 2.24
SNU13-205ENST00000463675 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
SNU13-205ENST00000463675 BAZ1AQ9NRL2 1556 aaPredicted RBP28.73■■■□□ 2.19
SNU13-205ENST00000463675 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
SNU13-205ENST00000463675 ATAD2BQ9ULI0 1458 aa28.6■■■□□ 2.17
SNU13-205ENST00000463675 SMARCA2P51531 1590 aa28.58■■■□□ 2.17
SNU13-205ENST00000463675 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
SNU13-205ENST00000463675 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
SNU13-205ENST00000463675 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
SNU13-205ENST00000463675 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
SNU13-205ENST00000463675 WIZO95785 1651 aa28.35■■■□□ 2.13
SNU13-205ENST00000463675 RSF1Q96T23 1441 aaPredicted RBP28.21■■■□□ 2.11
SNU13-205ENST00000463675 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
SNU13-205ENST00000463675 NESP48681 1621 aa28■■■□□ 2.07
SNU13-205ENST00000463675 ERCC6Q03468 1493 aa27.86■■■□□ 2.05
SNU13-205ENST00000463675 LAMC3Q9Y6N6 1575 aa27.85■■■□□ 2.05
SNU13-205ENST00000463675 KIF21AQ7Z4S6 1674 aa27.73■■■□□ 2.03
SNU13-205ENST00000463675 CADPSQ9ULU8 1353 aa27.7■■■□□ 2.02
SNU13-205ENST00000463675 CCDC88BA6NC98 1476 aa27.63■■■□□ 2.01
SNU13-205ENST00000463675 THOC2Q8NI27 1593 aaKnown RBP27.6■■■□□ 2.01
SNU13-205ENST00000463675 PDS5BQ9NTI5 1447 aa27.6■■■□□ 2.01
SNU13-205ENST00000463675 CFTRP13569 1480 aa27.56■■■□□ 2
SNU13-205ENST00000463675 PRDM2Q13029 1718 aa27.51■■□□□ 1.99
SNU13-205ENST00000463675 CUX2O14529 1486 aa27.51■■□□□ 1.99
SNU13-205ENST00000463675 SUPT5HO00267 1087 aaKnown RBP27.5■■□□□ 1.99
SNU13-205ENST00000463675 FANCD2Q9BXW9 1451 aa27.47■■□□□ 1.99
SNU13-205ENST00000463675 CEP164Q9UPV0 1460 aa27.45■■□□□ 1.99
SNU13-205ENST00000463675 MRC2Q9UBG0 1479 aa27.41■■□□□ 1.98
SNU13-205ENST00000463675 WDR62O43379 1518 aa27.33■■□□□ 1.97
SNU13-205ENST00000463675 URB2Q14146 1524 aaKnown RBP27.22■■□□□ 1.95
SNU13-205ENST00000463675 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
SNU13-205ENST00000463675 DNMBPQ6XZF7 1577 aa27.02■■□□□ 1.92
SNU13-205ENST00000463675 ABCC8Q09428 1581 aa26.91■■□□□ 1.9
SNU13-205ENST00000463675 CUX1P39880 1505 aa26.85■■□□□ 1.89
SNU13-205ENST00000463675 IFT140Q96RY7 1462 aa26.82■■□□□ 1.88
SNU13-205ENST00000463675 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
SNU13-205ENST00000463675 ZNF608Q9ULD9 1512 aaPredicted RBP26.78■■□□□ 1.88
SNU13-205ENST00000463675 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
SNU13-205ENST00000463675 FGD5Q6ZNL6 1462 aa26.76■■□□□ 1.87
SNU13-205ENST00000463675 EIF4G3O43432 1585 aaKnown RBP26.73■■□□□ 1.87
SNU13-205ENST00000463675 RAD54L2Q9Y4B4 1467 aa26.71■■□□□ 1.87
SNU13-205ENST00000463675 SYNJ1O43426 1573 aa26.66■■□□□ 1.86
SNU13-205ENST00000463675 SOGA1O94964 1423 aa26.63■■□□□ 1.85
SNU13-205ENST00000463675 BIVM-ERCC5R4GMW8 1640 aa26.62■■□□□ 1.85
SNU13-205ENST00000463675 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
SNU13-205ENST00000463675 WDR97A6NE52 1622 aa26.61■■□□□ 1.85
SNU13-205ENST00000463675 TOP2BQ02880 1626 aa26.6■■□□□ 1.85
SNU13-205ENST00000463675 DNAJC5Q9H3Z4 198 aa26.59■■□□□ 1.85
SNU13-205ENST00000463675 AQRO60306 1485 aaKnown RBP eCLIP26.58■■□□□ 1.851e-20■■■■■ 27.6
SNU13-205ENST00000463675 TDRD9Q8NDG6 1382 aaKnown RBP26.51■■□□□ 1.83
SNU13-205ENST00000463675 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
SNU13-205ENST00000463675 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
SNU13-205ENST00000463675 CHD1O14646 1710 aa26.43■■□□□ 1.82
SNU13-205ENST00000463675 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
SNU13-205ENST00000463675 SNAPC4Q5SXM2 1469 aa26.39■■□□□ 1.82
SNU13-205ENST00000463675 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
SNU13-205ENST00000463675 GRIN2BQ13224 1484 aa26.35■■□□□ 1.81
SNU13-205ENST00000463675 MAGI1Q96QZ7 1491 aaPredicted RBP26.28■■□□□ 1.8
SNU13-205ENST00000463675 OSCARQ8IYS5 282 aa26.26■■□□□ 1.79
SNU13-205ENST00000463675 FBLN2P98095 1184 aa26.24■■□□□ 1.79
SNU13-205ENST00000463675 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
SNU13-205ENST00000463675 SYNJ2O15056 1496 aa26.18■■□□□ 1.78
SNU13-205ENST00000463675 ERICH3Q5RHP9 1530 aa26.12■■□□□ 1.77
SNU13-205ENST00000463675 CHMP7Q8WUX9 453 aaPredicted RBP26.11■■□□□ 1.77
SNU13-205ENST00000463675 CLASP1Q7Z460 1538 aa26.06■■□□□ 1.76
SNU13-205ENST00000463675 RIMBP3CA6NJZ7 1639 aa26.05■■□□□ 1.76
SNU13-205ENST00000463675 RIMBP3BA6NNM3 1639 aa26.05■■□□□ 1.76
SNU13-205ENST00000463675 RIMBP3Q9UFD9 1639 aa26.05■■□□□ 1.76
SNU13-205ENST00000463675 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
SNU13-205ENST00000463675 KIF27Q86VH2 1401 aa26.03■■□□□ 1.76
SNU13-205ENST00000463675 FHAD1B1AJZ9 1412 aa26.02■■□□□ 1.76
SNU13-205ENST00000463675 ARHGEF11O15085 1522 aa26.01■■□□□ 1.75
SNU13-205ENST00000463675 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
SNU13-205ENST00000463675 CUL7Q14999 1698 aa25.94■■□□□ 1.74
SNU13-205ENST00000463675 TRIM41Q8WV44 630 aa25.9■■□□□ 1.74
SNU13-205ENST00000463675 NUP160Q12769 1436 aa25.89■■□□□ 1.74
SNU13-205ENST00000463675 IGF1RP08069 1367 aa25.88■■□□□ 1.73
SNU13-205ENST00000463675 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
SNU13-205ENST00000463675 ARAP1Q96P48 1450 aa25.81■■□□□ 1.72
SNU13-205ENST00000463675 SHROOM2Q13796 1616 aa25.76■■□□□ 1.71
SNU13-205ENST00000463675 ERCC6L2Q5T890 1561 aa25.75■■□□□ 1.71
SNU13-205ENST00000463675 CARMIL1Q5VZK9 1371 aa25.75■■□□□ 1.71
SNU13-205ENST00000463675 CYB5RLQ6IPT4 315 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms