RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 NISCHQ9Y2I1 1504 aa25.88■■□□□ 1.73
SNU13-202ENST00000355257 CCDC180Q9P1Z9 1646 aa23.26■■□□□ 1.31
SNU13-202ENST00000355257 ABCC9O60706 1549 aa23.07■■□□□ 1.28
SNU13-202ENST00000355257 RB1CC1Q8TDY2 1594 aa22.02■■□□□ 1.12
SNU13-202ENST00000355257 NACADO15069 1562 aa21.91■■□□□ 1.1
SNU13-202ENST00000355257 UNC13AQ9UPW8 1703 aa21.68■■□□□ 1.06
SNU13-202ENST00000355257 MYO15BQ96JP2 1530 aa21.67■■□□□ 1.06
SNU13-202ENST00000355257 DCAF8L2P0C7V8 631 aa21.61■■□□□ 1.05
SNU13-202ENST00000355257 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
SNU13-202ENST00000355257 ZCCHC6Q5VYS8 1495 aaKnown RBP21.49■■□□□ 1.03
SNU13-202ENST00000355257 BICRAQ9NZM4 1560 aa21.47■■□□□ 1.03
SNU13-202ENST00000355257 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
SNU13-202ENST00000355257 DCAF1Q9Y4B6 1507 aa21.42■■□□□ 1.02
SNU13-202ENST00000355257 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
SNU13-202ENST00000355257 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
SNU13-202ENST00000355257 CC2D2AQ9P2K1 1620 aa20.91■□□□□ 0.94
SNU13-202ENST00000355257 EIF4G1Q04637 1599 aaKnown RBP20.88■□□□□ 0.93
SNU13-202ENST00000355257 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
SNU13-202ENST00000355257 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
SNU13-202ENST00000355257 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
SNU13-202ENST00000355257 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
SNU13-202ENST00000355257 HMGXB3Q12766 1538 aa20.1■□□□□ 0.81
SNU13-202ENST00000355257 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
SNU13-202ENST00000355257 BAZ1AQ9NRL2 1556 aaPredicted RBP20.07■□□□□ 0.8
SNU13-202ENST00000355257 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
SNU13-202ENST00000355257 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
SNU13-202ENST00000355257 BAZ1BQ9UIG0 1483 aaKnown RBP19.93■□□□□ 0.78
SNU13-202ENST00000355257 NESP48681 1621 aa19.88■□□□□ 0.77
SNU13-202ENST00000355257 CUX2O14529 1486 aa19.87■□□□□ 0.77
SNU13-202ENST00000355257 ERCC6Q03468 1493 aa19.85■□□□□ 0.77
SNU13-202ENST00000355257 LAMC3Q9Y6N6 1575 aa19.76■□□□□ 0.75
SNU13-202ENST00000355257 WIZO95785 1651 aa19.74■□□□□ 0.75
SNU13-202ENST00000355257 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
SNU13-202ENST00000355257 THOC2Q8NI27 1593 aaKnown RBP19.72■□□□□ 0.75
SNU13-202ENST00000355257 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
SNU13-202ENST00000355257 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
SNU13-202ENST00000355257 PDS5BQ9NTI5 1447 aa19.56■□□□□ 0.72
SNU13-202ENST00000355257 RSF1Q96T23 1441 aaPredicted RBP19.54■□□□□ 0.72
SNU13-202ENST00000355257 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
SNU13-202ENST00000355257 MRC2Q9UBG0 1479 aa19.43■□□□□ 0.7
SNU13-202ENST00000355257 WDR62O43379 1518 aa19.43■□□□□ 0.7
SNU13-202ENST00000355257 CFTRP13569 1480 aa19.4■□□□□ 0.7
SNU13-202ENST00000355257 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
SNU13-202ENST00000355257 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
SNU13-202ENST00000355257 PRDM2Q13029 1718 aa19.32■□□□□ 0.68
SNU13-202ENST00000355257 URB2Q14146 1524 aaKnown RBP19.23■□□□□ 0.67
SNU13-202ENST00000355257 CCDC88BA6NC98 1476 aa19.22■□□□□ 0.67
SNU13-202ENST00000355257 SUPT5HO00267 1087 aaKnown RBP19.09■□□□□ 0.65
SNU13-202ENST00000355257 TOPBP1Q92547 1522 aa19.02■□□□□ 0.64
SNU13-202ENST00000355257 IFT140Q96RY7 1462 aa18.98■□□□□ 0.63
SNU13-202ENST00000355257 DNMBPQ6XZF7 1577 aa18.97■□□□□ 0.63
SNU13-202ENST00000355257 ZNF608Q9ULD9 1512 aaPredicted RBP18.96■□□□□ 0.63
SNU13-202ENST00000355257 ABCC8Q09428 1581 aa18.95■□□□□ 0.62
SNU13-202ENST00000355257 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
SNU13-202ENST00000355257 EIF4G3O43432 1585 aaKnown RBP18.9■□□□□ 0.62
SNU13-202ENST00000355257 OSCARQ8IYS5 282 aa18.89■□□□□ 0.61
SNU13-202ENST00000355257 POLA1P09884 1462 aaPredicted RBP18.83■□□□□ 0.61
SNU13-202ENST00000355257 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
SNU13-202ENST00000355257 CHD1O14646 1710 aa18.77■□□□□ 0.6
SNU13-202ENST00000355257 AQRO60306 1485 aaKnown RBP eCLIP18.77■□□□□ 0.61e-20■■■■■ 27.6
SNU13-202ENST00000355257 RIMBP3CA6NJZ7 1639 aa18.76■□□□□ 0.59
SNU13-202ENST00000355257 RIMBP3BA6NNM3 1639 aa18.76■□□□□ 0.59
SNU13-202ENST00000355257 RIMBP3Q9UFD9 1639 aa18.76■□□□□ 0.59
SNU13-202ENST00000355257 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
SNU13-202ENST00000355257 CUX1P39880 1505 aa18.74■□□□□ 0.59
SNU13-202ENST00000355257 FGD5Q6ZNL6 1462 aa18.72■□□□□ 0.59
SNU13-202ENST00000355257 WDR97A6NE52 1622 aa18.7■□□□□ 0.58
SNU13-202ENST00000355257 SOGA1O94964 1423 aa18.69■□□□□ 0.58
SNU13-202ENST00000355257 ARHGEF11O15085 1522 aa18.68■□□□□ 0.58
SNU13-202ENST00000355257 TDRD9Q8NDG6 1382 aaKnown RBP18.65■□□□□ 0.58
SNU13-202ENST00000355257 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.58
SNU13-202ENST00000355257 SNAPC4Q5SXM2 1469 aa18.59■□□□□ 0.57
SNU13-202ENST00000355257 PBRM1Q86U86 1689 aa18.57■□□□□ 0.56
SNU13-202ENST00000355257 MAGI1Q96QZ7 1491 aaPredicted RBP18.55■□□□□ 0.56
SNU13-202ENST00000355257 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
SNU13-202ENST00000355257 ABCA5Q8WWZ7 1642 aa18.54■□□□□ 0.56
SNU13-202ENST00000355257 GRIN2BQ13224 1484 aa18.54■□□□□ 0.56
SNU13-202ENST00000355257 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.56
SNU13-202ENST00000355257 FBLN2P98095 1184 aa18.51■□□□□ 0.55
SNU13-202ENST00000355257 ARAP1Q96P48 1450 aa18.51■□□□□ 0.55
SNU13-202ENST00000355257 BIVM-ERCC5R4GMW8 1640 aa18.51■□□□□ 0.55
SNU13-202ENST00000355257 SYNJ2O15056 1496 aa18.49■□□□□ 0.55
SNU13-202ENST00000355257 GAPVD1Q14C86 1478 aa18.49■□□□□ 0.55
SNU13-202ENST00000355257 SYNJ1O43426 1573 aa18.48■□□□□ 0.55
SNU13-202ENST00000355257 TOP2BQ02880 1626 aa18.47■□□□□ 0.55
SNU13-202ENST00000355257 CYB5RLQ6IPT4 315 aa18.43■□□□□ 0.54
SNU13-202ENST00000355257 CHMP7Q8WUX9 453 aaPredicted RBP18.42■□□□□ 0.54
SNU13-202ENST00000355257 WRNQ14191 1432 aaPredicted RBP eCLIP18.4■□□□□ 0.54
SNU13-202ENST00000355257 ADAMTS12P58397 1594 aa18.37■□□□□ 0.53
SNU13-202ENST00000355257 GRIN2AQ12879 1464 aa18.33■□□□□ 0.52
SNU13-202ENST00000355257 CEP170Q5SW79 1584 aa18.3■□□□□ 0.52
SNU13-202ENST00000355257 ERICH3Q5RHP9 1530 aa18.29■□□□□ 0.52
SNU13-202ENST00000355257 NUP160Q12769 1436 aa18.28■□□□□ 0.52
SNU13-202ENST00000355257 ERCC6L2Q5T890 1561 aa18.26■□□□□ 0.51
SNU13-202ENST00000355257 SHROOM2Q13796 1616 aa18.26■□□□□ 0.51
SNU13-202ENST00000355257 FHAD1B1AJZ9 1412 aa18.25■□□□□ 0.51
SNU13-202ENST00000355257 TRHP20396 242 aaPredicted RBP18.14■□□□□ 0.49
SNU13-202ENST00000355257 RUSC2Q8N2Y8 1516 aa18.12■□□□□ 0.49
SNU13-202ENST00000355257 CUL7Q14999 1698 aa18.05■□□□□ 0.48
SNU13-202ENST00000355257 IGF1RP08069 1367 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms