RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 NISCHQ9Y2I1 1504 aa25.03■■□□□ 1.6
TSPAN9-202ENST00000407263 CCDC180Q9P1Z9 1646 aa22.37■■□□□ 1.17
TSPAN9-202ENST00000407263 ABCC9O60706 1549 aa21.73■■□□□ 1.07
TSPAN9-202ENST00000407263 RB1CC1Q8TDY2 1594 aa20.94■□□□□ 0.94
TSPAN9-202ENST00000407263 ZCCHC6Q5VYS8 1495 aaKnown RBP20.91■□□□□ 0.94
TSPAN9-202ENST00000407263 NACADO15069 1562 aa20.89■□□□□ 0.93
TSPAN9-202ENST00000407263 DCAF8L2P0C7V8 631 aa20.8■□□□□ 0.92
TSPAN9-202ENST00000407263 MYO15BQ96JP2 1530 aa20.71■□□□□ 0.91
TSPAN9-202ENST00000407263 UNC13AQ9UPW8 1703 aa20.68■□□□□ 0.9
TSPAN9-202ENST00000407263 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
TSPAN9-202ENST00000407263 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
TSPAN9-202ENST00000407263 BICRAQ9NZM4 1560 aa20.33■□□□□ 0.84
TSPAN9-202ENST00000407263 PABPN1Q86U42 306 aaKnown RBP eCLIP20.22■□□□□ 0.83
TSPAN9-202ENST00000407263 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
TSPAN9-202ENST00000407263 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
TSPAN9-202ENST00000407263 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
TSPAN9-202ENST00000407263 CC2D2AQ9P2K1 1620 aa19.71■□□□□ 0.75
TSPAN9-202ENST00000407263 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
TSPAN9-202ENST00000407263 CECR2Q9BXF3 1484 aa19.5■□□□□ 0.71
TSPAN9-202ENST00000407263 BAZ1AQ9NRL2 1556 aaPredicted RBP19.43■□□□□ 0.7
TSPAN9-202ENST00000407263 MROH2BQ7Z745 1585 aa19.33■□□□□ 0.69
TSPAN9-202ENST00000407263 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
TSPAN9-202ENST00000407263 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.67
TSPAN9-202ENST00000407263 PEG3Q9GZU2 1588 aa19.24■□□□□ 0.67
TSPAN9-202ENST00000407263 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
TSPAN9-202ENST00000407263 WIZO95785 1651 aa19.21■□□□□ 0.67
TSPAN9-202ENST00000407263 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
TSPAN9-202ENST00000407263 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
TSPAN9-202ENST00000407263 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
TSPAN9-202ENST00000407263 TOP2AP11388 1531 aaKnown RBP18.95■□□□□ 0.62
TSPAN9-202ENST00000407263 NESP48681 1621 aa18.84■□□□□ 0.61
TSPAN9-202ENST00000407263 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
TSPAN9-202ENST00000407263 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
TSPAN9-202ENST00000407263 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
TSPAN9-202ENST00000407263 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
TSPAN9-202ENST00000407263 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
TSPAN9-202ENST00000407263 THOC2Q8NI27 1593 aaKnown RBP18.63■□□□□ 0.57
TSPAN9-202ENST00000407263 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
TSPAN9-202ENST00000407263 SUPT5HO00267 1087 aaKnown RBP18.61■□□□□ 0.57
TSPAN9-202ENST00000407263 CFTRP13569 1480 aa18.57■□□□□ 0.56
TSPAN9-202ENST00000407263 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
TSPAN9-202ENST00000407263 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
TSPAN9-202ENST00000407263 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
TSPAN9-202ENST00000407263 CUX2O14529 1486 aa18.46■□□□□ 0.54
TSPAN9-202ENST00000407263 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.54
TSPAN9-202ENST00000407263 WDR62O43379 1518 aa18.42■□□□□ 0.54
TSPAN9-202ENST00000407263 URB2Q14146 1524 aaKnown RBP18.34■□□□□ 0.53
TSPAN9-202ENST00000407263 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
TSPAN9-202ENST00000407263 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
TSPAN9-202ENST00000407263 CUX1P39880 1505 aa18.15■□□□□ 0.5
TSPAN9-202ENST00000407263 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
TSPAN9-202ENST00000407263 TARBP1Q13395 1621 aaKnown RBP18.08■□□□□ 0.48
TSPAN9-202ENST00000407263 BIVM-ERCC5R4GMW8 1640 aa18.08■□□□□ 0.48
TSPAN9-202ENST00000407263 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
TSPAN9-202ENST00000407263 EIF4G3O43432 1585 aaKnown RBP18.07■□□□□ 0.48
TSPAN9-202ENST00000407263 FGD5Q6ZNL6 1462 aa18.07■□□□□ 0.48
TSPAN9-202ENST00000407263 WDR97A6NE52 1622 aa18.06■□□□□ 0.48
TSPAN9-202ENST00000407263 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
TSPAN9-202ENST00000407263 IFT140Q96RY7 1462 aa18.06■□□□□ 0.48
TSPAN9-202ENST00000407263 TOP2BQ02880 1626 aa18.02■□□□□ 0.48
TSPAN9-202ENST00000407263 ZNF608Q9ULD9 1512 aaPredicted RBP18.02■□□□□ 0.47
TSPAN9-202ENST00000407263 RAD54L2Q9Y4B4 1467 aa18■□□□□ 0.47
TSPAN9-202ENST00000407263 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
TSPAN9-202ENST00000407263 PBRM1Q86U86 1689 aa17.95■□□□□ 0.46
TSPAN9-202ENST00000407263 SOGA1O94964 1423 aa17.92■□□□□ 0.46
TSPAN9-202ENST00000407263 CHD1O14646 1710 aa17.89■□□□□ 0.46
TSPAN9-202ENST00000407263 ABCA5Q8WWZ7 1642 aa17.89■□□□□ 0.45
TSPAN9-202ENST00000407263 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.458e-8■■■■■ 32.4
TSPAN9-202ENST00000407263 ABCA10Q8WWZ4 1543 aa17.85■□□□□ 0.45
TSPAN9-202ENST00000407263 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.45
TSPAN9-202ENST00000407263 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
TSPAN9-202ENST00000407263 GAPVD1Q14C86 1478 aa17.77■□□□□ 0.44
TSPAN9-202ENST00000407263 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
TSPAN9-202ENST00000407263 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
TSPAN9-202ENST00000407263 MAGI1Q96QZ7 1491 aaPredicted RBP17.71■□□□□ 0.43
TSPAN9-202ENST00000407263 DNAJC5Q9H3Z4 198 aa17.67■□□□□ 0.42
TSPAN9-202ENST00000407263 ERICH3Q5RHP9 1530 aa17.65■□□□□ 0.42
TSPAN9-202ENST00000407263 SYNJ2O15056 1496 aa17.64■□□□□ 0.41
TSPAN9-202ENST00000407263 FBLN2P98095 1184 aa17.62■□□□□ 0.41
TSPAN9-202ENST00000407263 CUL7Q14999 1698 aa17.6■□□□□ 0.41
TSPAN9-202ENST00000407263 KIF27Q86VH2 1401 aa17.58■□□□□ 0.41
TSPAN9-202ENST00000407263 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
TSPAN9-202ENST00000407263 GRIN2AQ12879 1464 aa17.56■□□□□ 0.4
TSPAN9-202ENST00000407263 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
TSPAN9-202ENST00000407263 CEP170Q5SW79 1584 aa17.54■□□□□ 0.4
TSPAN9-202ENST00000407263 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
TSPAN9-202ENST00000407263 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
TSPAN9-202ENST00000407263 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
TSPAN9-202ENST00000407263 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
TSPAN9-202ENST00000407263 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
TSPAN9-202ENST00000407263 TRIM41Q8WV44 630 aa17.52■□□□□ 0.4
TSPAN9-202ENST00000407263 RUSC2Q8N2Y8 1516 aa17.51■□□□□ 0.39
TSPAN9-202ENST00000407263 ARHGEF11O15085 1522 aa17.47■□□□□ 0.39
TSPAN9-202ENST00000407263 NUP160Q12769 1436 aa17.44■□□□□ 0.38
TSPAN9-202ENST00000407263 IGF1RP08069 1367 aa17.43■□□□□ 0.38
TSPAN9-202ENST00000407263 SHROOM2Q13796 1616 aa17.4■□□□□ 0.38
TSPAN9-202ENST00000407263 CTTNBP2Q8WZ74 1663 aa17.39■□□□□ 0.37
TSPAN9-202ENST00000407263 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
TSPAN9-202ENST00000407263 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
TSPAN9-202ENST00000407263 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms