RNA–Protein interactions for RNA: ENST00000585203.6

ACADVL-239, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 5

Gene ACADVL, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-239ENST00000585203 NISCHQ9Y2I1 1504 aa37.62■■■■□ 3.61
ACADVL-239ENST00000585203 CCDC180Q9P1Z9 1646 aa33.69■■■□□ 2.98
ACADVL-239ENST00000585203 ABCC9O60706 1549 aa33.07■■■□□ 2.89
ACADVL-239ENST00000585203 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
ACADVL-239ENST00000585203 NACADO15069 1562 aa31.64■■■□□ 2.65
ACADVL-239ENST00000585203 DNAJC5BQ9UF47 199 aa31.6■■■□□ 2.65
ACADVL-239ENST00000585203 MYO15BQ96JP2 1530 aa31.4■■■□□ 2.62
ACADVL-239ENST00000585203 UNC13AQ9UPW8 1703 aa31.31■■■□□ 2.6
ACADVL-239ENST00000585203 ZCCHC6Q5VYS8 1495 aaKnown RBP31.31■■■□□ 2.6
ACADVL-239ENST00000585203 DCAF8L2P0C7V8 631 aa31.18■■■□□ 2.58
ACADVL-239ENST00000585203 DCAF1Q9Y4B6 1507 aa31.16■■■□□ 2.58
ACADVL-239ENST00000585203 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
ACADVL-239ENST00000585203 PABPN1Q86U42 306 aaKnown RBP eCLIP30.77■■■□□ 2.527e-9■■■■■ 36.4
ACADVL-239ENST00000585203 SCRIBQ14160 1630 aa30.62■■■□□ 2.49
ACADVL-239ENST00000585203 SHROOM4Q9ULL8 1493 aa30.46■■■□□ 2.47
ACADVL-239ENST00000585203 EIF4G1Q04637 1599 aaKnown RBP30.06■■■□□ 2.4
ACADVL-239ENST00000585203 CC2D2AQ9P2K1 1620 aa30.03■■■□□ 2.4
ACADVL-239ENST00000585203 CECR2Q9BXF3 1484 aa29.75■■■□□ 2.35
ACADVL-239ENST00000585203 DNAJC5Q9H3Z4 198 aa29.66■■■□□ 2.34
ACADVL-239ENST00000585203 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
ACADVL-239ENST00000585203 NCAPD3P42695 1498 aa29.18■■■□□ 2.26
ACADVL-239ENST00000585203 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
ACADVL-239ENST00000585203 BAZ1AQ9NRL2 1556 aaPredicted RBP29.14■■■□□ 2.26
ACADVL-239ENST00000585203 SMARCA2P51531 1590 aa29.08■■■□□ 2.25
ACADVL-239ENST00000585203 HMGXB3Q12766 1538 aa29.07■■■□□ 2.24
ACADVL-239ENST00000585203 PEG3Q9GZU2 1588 aa29.07■■■□□ 2.24
ACADVL-239ENST00000585203 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.24
ACADVL-239ENST00000585203 BAZ1BQ9UIG0 1483 aaKnown RBP28.83■■■□□ 2.21
ACADVL-239ENST00000585203 WIZO95785 1651 aa28.73■■■□□ 2.19
ACADVL-239ENST00000585203 NESP48681 1621 aa28.61■■■□□ 2.17
ACADVL-239ENST00000585203 RSF1Q96T23 1441 aaPredicted RBP28.51■■■□□ 2.15
ACADVL-239ENST00000585203 LAMC3Q9Y6N6 1575 aa28.49■■■□□ 2.15
ACADVL-239ENST00000585203 CUX2O14529 1486 aa28.46■■■□□ 2.15
ACADVL-239ENST00000585203 ERCC6Q03468 1493 aa28.43■■■□□ 2.14
ACADVL-239ENST00000585203 KIF21AQ7Z4S6 1674 aa28.38■■■□□ 2.13
ACADVL-239ENST00000585203 THOC2Q8NI27 1593 aaKnown RBP28.36■■■□□ 2.13
ACADVL-239ENST00000585203 TOP2AP11388 1531 aaKnown RBP28.34■■■□□ 2.13
ACADVL-239ENST00000585203 CADPSQ9ULU8 1353 aa28.24■■■□□ 2.11
ACADVL-239ENST00000585203 PDS5BQ9NTI5 1447 aa28.16■■■□□ 2.1
ACADVL-239ENST00000585203 CFTRP13569 1480 aa28.09■■■□□ 2.09
ACADVL-239ENST00000585203 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
ACADVL-239ENST00000585203 WDR62O43379 1518 aa28■■■□□ 2.07
ACADVL-239ENST00000585203 MRC2Q9UBG0 1479 aa27.98■■■□□ 2.07
ACADVL-239ENST00000585203 CCDC88BA6NC98 1476 aa27.97■■■□□ 2.07
ACADVL-239ENST00000585203 FANCD2Q9BXW9 1451 aa27.95■■■□□ 2.06
ACADVL-239ENST00000585203 CEP164Q9UPV0 1460 aa27.93■■■□□ 2.06
ACADVL-239ENST00000585203 TRIM41Q8WV44 630 aa27.8■■■□□ 2.04
ACADVL-239ENST00000585203 URB2Q14146 1524 aaKnown RBP27.78■■■□□ 2.04
ACADVL-239ENST00000585203 TOPBP1Q92547 1522 aa27.51■■■□□ 2
ACADVL-239ENST00000585203 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
ACADVL-239ENST00000585203 ABCC8Q09428 1581 aa27.39■■□□□ 1.98
ACADVL-239ENST00000585203 TARBP1Q13395 1621 aaKnown RBP27.35■■□□□ 1.97
ACADVL-239ENST00000585203 IFT140Q96RY7 1462 aa27.35■■□□□ 1.97
ACADVL-239ENST00000585203 ZNF608Q9ULD9 1512 aaPredicted RBP27.34■■□□□ 1.97
ACADVL-239ENST00000585203 SUPT5HO00267 1087 aaKnown RBP27.29■■□□□ 1.96
ACADVL-239ENST00000585203 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.96
ACADVL-239ENST00000585203 POLA1P09884 1462 aaPredicted RBP27.26■■□□□ 1.95
ACADVL-239ENST00000585203 CUX1P39880 1505 aa27.24■■□□□ 1.95
ACADVL-239ENST00000585203 FGD5Q6ZNL6 1462 aa27.13■■□□□ 1.93
ACADVL-239ENST00000585203 WDR97A6NE52 1622 aa27.13■■□□□ 1.93
ACADVL-239ENST00000585203 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
ACADVL-239ENST00000585203 AQRO60306 1485 aaKnown RBP eCLIP27.07■■□□□ 1.923e-6■■■□□ 18.3
ACADVL-239ENST00000585203 CHD1O14646 1710 aa27.04■■□□□ 1.92
ACADVL-239ENST00000585203 SOGA1O94964 1423 aa27.03■■□□□ 1.92
ACADVL-239ENST00000585203 OSCARQ8IYS5 282 aa27■■□□□ 1.91
ACADVL-239ENST00000585203 BIVM-ERCC5R4GMW8 1640 aa26.99■■□□□ 1.91
ACADVL-239ENST00000585203 SYNJ1O43426 1573 aa26.93■■□□□ 1.9
ACADVL-239ENST00000585203 TOP2BQ02880 1626 aa26.93■■□□□ 1.9
ACADVL-239ENST00000585203 TDRD9Q8NDG6 1382 aaKnown RBP26.92■■□□□ 1.9
ACADVL-239ENST00000585203 PBRM1Q86U86 1689 aa26.91■■□□□ 1.9
ACADVL-239ENST00000585203 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
ACADVL-239ENST00000585203 ABCA10Q8WWZ4 1543 aa26.87■■□□□ 1.89
ACADVL-239ENST00000585203 SNAPC4Q5SXM2 1469 aa26.84■■□□□ 1.89
ACADVL-239ENST00000585203 RIMBP3CA6NJZ7 1639 aa26.83■■□□□ 1.89
ACADVL-239ENST00000585203 RIMBP3BA6NNM3 1639 aa26.83■■□□□ 1.89
ACADVL-239ENST00000585203 RIMBP3Q9UFD9 1639 aa26.83■■□□□ 1.89
ACADVL-239ENST00000585203 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
ACADVL-239ENST00000585203 GRIN2BQ13224 1484 aa26.79■■□□□ 1.88
ACADVL-239ENST00000585203 MAGI1Q96QZ7 1491 aaPredicted RBP26.79■■□□□ 1.88
ACADVL-239ENST00000585203 GAPVD1Q14C86 1478 aa26.76■■□□□ 1.87
ACADVL-239ENST00000585203 ARHGEF11O15085 1522 aa26.74■■□□□ 1.87
ACADVL-239ENST00000585203 CLASP1Q7Z460 1538 aa26.71■■□□□ 1.87
ACADVL-239ENST00000585203 SYNJ2O15056 1496 aa26.68■■□□□ 1.86
ACADVL-239ENST00000585203 ADAMTS12P58397 1594 aa26.63■■□□□ 1.85
ACADVL-239ENST00000585203 FBLN2P98095 1184 aa26.58■■□□□ 1.85
ACADVL-239ENST00000585203 ERICH3Q5RHP9 1530 aa26.54■■□□□ 1.84
ACADVL-239ENST00000585203 ARAP1Q96P48 1450 aa26.52■■□□□ 1.84
ACADVL-239ENST00000585203 CHMP7Q8WUX9 453 aaPredicted RBP26.5■■□□□ 1.83
ACADVL-239ENST00000585203 GRIN2AQ12879 1464 aa26.49■■□□□ 1.83
ACADVL-239ENST00000585203 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
ACADVL-239ENST00000585203 NUP160Q12769 1436 aa26.43■■□□□ 1.82
ACADVL-239ENST00000585203 CYB5RLQ6IPT4 315 aa26.43■■□□□ 1.82
ACADVL-239ENST00000585203 FHAD1B1AJZ9 1412 aa26.42■■□□□ 1.82
ACADVL-239ENST00000585203 SHROOM2Q13796 1616 aa26.38■■□□□ 1.81
ACADVL-239ENST00000585203 TRHP20396 242 aaPredicted RBP26.36■■□□□ 1.81
ACADVL-239ENST00000585203 ERCC6L2Q5T890 1561 aa26.33■■□□□ 1.8
ACADVL-239ENST00000585203 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
ACADVL-239ENST00000585203 CUL7Q14999 1698 aa26.27■■□□□ 1.8
ACADVL-239ENST00000585203 RUSC2Q8N2Y8 1516 aa26.25■■□□□ 1.79
ACADVL-239ENST00000585203 IGF1RP08069 1367 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms