RNA–Protein interactions for RNA: ENST00000396705.9

TPI1-202, Transcript of triosephosphate isomerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPI1, Length 1,231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPI1-202ENST00000396705 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
TPI1-202ENST00000396705 CCDC180Q9P1Z9 1646 aa26.01■■□□□ 1.75
TPI1-202ENST00000396705 ABCC9O60706 1549 aa25.78■■□□□ 1.72
TPI1-202ENST00000396705 DCAF8L2P0C7V8 631 aa24.66■■□□□ 1.54
TPI1-202ENST00000396705 RB1CC1Q8TDY2 1594 aa24.6■■□□□ 1.53
TPI1-202ENST00000396705 NACADO15069 1562 aa24.51■■□□□ 1.51
TPI1-202ENST00000396705 ZCCHC6Q5VYS8 1495 aaKnown RBP24.29■■□□□ 1.48
TPI1-202ENST00000396705 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
TPI1-202ENST00000396705 UNC13AQ9UPW8 1703 aa24.16■■□□□ 1.46
TPI1-202ENST00000396705 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.454e-6■□□□□ 9.3
TPI1-202ENST00000396705 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
TPI1-202ENST00000396705 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
TPI1-202ENST00000396705 BICRAQ9NZM4 1560 aa23.95■■□□□ 1.43
TPI1-202ENST00000396705 SCRIBQ14160 1630 aa23.82■■□□□ 1.4
TPI1-202ENST00000396705 SHROOM4Q9ULL8 1493 aa23.47■■□□□ 1.35
TPI1-202ENST00000396705 EIF4G1Q04637 1599 aaKnown RBP23.29■■□□□ 1.32
TPI1-202ENST00000396705 CC2D2AQ9P2K1 1620 aa23.27■■□□□ 1.32
TPI1-202ENST00000396705 CECR2Q9BXF3 1484 aa23.13■■□□□ 1.29
TPI1-202ENST00000396705 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
TPI1-202ENST00000396705 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
TPI1-202ENST00000396705 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
TPI1-202ENST00000396705 BAZ1AQ9NRL2 1556 aaPredicted RBP22.63■■□□□ 1.21
TPI1-202ENST00000396705 MROH2BQ7Z745 1585 aa22.59■■□□□ 1.21
TPI1-202ENST00000396705 SMARCA2P51531 1590 aa22.56■■□□□ 1.2
TPI1-202ENST00000396705 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
TPI1-202ENST00000396705 PEG3Q9GZU2 1588 aa22.46■■□□□ 1.19
TPI1-202ENST00000396705 BAZ1BQ9UIG0 1483 aaKnown RBP22.44■■□□□ 1.18
TPI1-202ENST00000396705 WIZO95785 1651 aa22.36■■□□□ 1.17
TPI1-202ENST00000396705 NESP48681 1621 aa22.28■■□□□ 1.16
TPI1-202ENST00000396705 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
TPI1-202ENST00000396705 ERCC6Q03468 1493 aa22.16■■□□□ 1.14
TPI1-202ENST00000396705 LAMC3Q9Y6N6 1575 aa22.06■■□□□ 1.12
TPI1-202ENST00000396705 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
TPI1-202ENST00000396705 CADPSQ9ULU8 1353 aa22■■□□□ 1.11
TPI1-202ENST00000396705 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
TPI1-202ENST00000396705 CUX2O14529 1486 aa21.95■■□□□ 1.1
TPI1-202ENST00000396705 PDS5BQ9NTI5 1447 aa21.93■■□□□ 1.1
TPI1-202ENST00000396705 THOC2Q8NI27 1593 aaKnown RBP21.89■■□□□ 1.09
TPI1-202ENST00000396705 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
TPI1-202ENST00000396705 CFTRP13569 1480 aa21.82■■□□□ 1.08
TPI1-202ENST00000396705 FANCD2Q9BXW9 1451 aa21.76■■□□□ 1.07
TPI1-202ENST00000396705 MRC2Q9UBG0 1479 aa21.72■■□□□ 1.07
TPI1-202ENST00000396705 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
TPI1-202ENST00000396705 WDR62O43379 1518 aa21.65■■□□□ 1.06
TPI1-202ENST00000396705 SUPT5HO00267 1087 aaKnown RBP21.63■■□□□ 1.05
TPI1-202ENST00000396705 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
TPI1-202ENST00000396705 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
TPI1-202ENST00000396705 URB2Q14146 1524 aaKnown RBP21.59■■□□□ 1.05
TPI1-202ENST00000396705 TOPBP1Q92547 1522 aa21.39■■□□□ 1.02
TPI1-202ENST00000396705 DNMBPQ6XZF7 1577 aa21.31■■□□□ 1
TPI1-202ENST00000396705 ABCC8Q09428 1581 aa21.3■■□□□ 1
TPI1-202ENST00000396705 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
TPI1-202ENST00000396705 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
TPI1-202ENST00000396705 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
TPI1-202ENST00000396705 CUX1P39880 1505 aa21.19■□□□□ 0.98
TPI1-202ENST00000396705 RAD54L2Q9Y4B4 1467 aa21.18■□□□□ 0.98
TPI1-202ENST00000396705 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
TPI1-202ENST00000396705 AQRO60306 1485 aaKnown RBP eCLIP21.14■□□□□ 0.987e-9■■■■■ 55.8
TPI1-202ENST00000396705 SOGA1O94964 1423 aa21.13■□□□□ 0.97
TPI1-202ENST00000396705 FGD5Q6ZNL6 1462 aa21.12■□□□□ 0.97
TPI1-202ENST00000396705 EIF4G3O43432 1585 aaKnown RBP21.11■□□□□ 0.97
TPI1-202ENST00000396705 OSCARQ8IYS5 282 aa21.1■□□□□ 0.97
TPI1-202ENST00000396705 TDRD9Q8NDG6 1382 aaKnown RBP21.08■□□□□ 0.96
TPI1-202ENST00000396705 FBLN2P98095 1184 aa20.95■□□□□ 0.94
TPI1-202ENST00000396705 CHD1O14646 1710 aa20.94■□□□□ 0.94
TPI1-202ENST00000396705 WRNQ14191 1432 aaPredicted RBP eCLIP20.94■□□□□ 0.94
TPI1-202ENST00000396705 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
TPI1-202ENST00000396705 WDR97A6NE52 1622 aa20.93■□□□□ 0.94
TPI1-202ENST00000396705 BIVM-ERCC5R4GMW8 1640 aa20.91■□□□□ 0.94
TPI1-202ENST00000396705 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
TPI1-202ENST00000396705 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.94
TPI1-202ENST00000396705 TRIM41Q8WV44 630 aa20.88■□□□□ 0.93
TPI1-202ENST00000396705 ABCA10Q8WWZ4 1543 aa20.88■□□□□ 0.93
TPI1-202ENST00000396705 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
TPI1-202ENST00000396705 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
TPI1-202ENST00000396705 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
TPI1-202ENST00000396705 ABCA5Q8WWZ7 1642 aa20.82■□□□□ 0.92
TPI1-202ENST00000396705 CHMP7Q8WUX9 453 aaPredicted RBP20.81■□□□□ 0.92
TPI1-202ENST00000396705 MAGI1Q96QZ7 1491 aaPredicted RBP20.79■□□□□ 0.92
TPI1-202ENST00000396705 RIMBP3CA6NJZ7 1639 aa20.78■□□□□ 0.92
TPI1-202ENST00000396705 RIMBP3BA6NNM3 1639 aa20.78■□□□□ 0.92
TPI1-202ENST00000396705 RIMBP3Q9UFD9 1639 aa20.78■□□□□ 0.92
TPI1-202ENST00000396705 SYNJ2O15056 1496 aa20.74■□□□□ 0.91
TPI1-202ENST00000396705 ARHGEF11O15085 1522 aa20.73■□□□□ 0.91
TPI1-202ENST00000396705 CLASP1Q7Z460 1538 aa20.66■□□□□ 0.9
TPI1-202ENST00000396705 CYB5RLQ6IPT4 315 aa20.64■□□□□ 0.89
TPI1-202ENST00000396705 ADAMTS12P58397 1594 aa20.62■□□□□ 0.89
TPI1-202ENST00000396705 ERICH3Q5RHP9 1530 aa20.6■□□□□ 0.89
TPI1-202ENST00000396705 GRIN2AQ12879 1464 aa20.59■□□□□ 0.89
TPI1-202ENST00000396705 FHAD1B1AJZ9 1412 aa20.59■□□□□ 0.89
TPI1-202ENST00000396705 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
TPI1-202ENST00000396705 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
TPI1-202ENST00000396705 IGF1RP08069 1367 aa20.52■□□□□ 0.88
TPI1-202ENST00000396705 NUP160Q12769 1436 aa20.51■□□□□ 0.87
TPI1-202ENST00000396705 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
TPI1-202ENST00000396705 ERCC6L2Q5T890 1561 aa20.46■□□□□ 0.87
TPI1-202ENST00000396705 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
TPI1-202ENST00000396705 JPH4Q96JJ6 628 aa20.38■□□□□ 0.85
TPI1-202ENST00000396705 CARMIL1Q5VZK9 1371 aa20.37■□□□□ 0.85
TPI1-202ENST00000396705 SHROOM2Q13796 1616 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms