RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 NISCHQ9Y2I1 1504 aa61.28■■■■■ 7.4
SNAPC3-203ENST00000421710 CCDC180Q9P1Z9 1646 aa54.7■■■■■ 6.35
SNAPC3-203ENST00000421710 ABCC9O60706 1549 aa53.65■■■■■ 6.18
SNAPC3-203ENST00000421710 RB1CC1Q8TDY2 1594 aa51.6■■■■■ 5.85
SNAPC3-203ENST00000421710 NACADO15069 1562 aa51.47■■■■■ 5.83
SNAPC3-203ENST00000421710 DCAF8L2P0C7V8 631 aa51.26■■■■■ 5.8
SNAPC3-203ENST00000421710 MYO15BQ96JP2 1530 aa51.1■■■■■ 5.77
SNAPC3-203ENST00000421710 ZCCHC6Q5VYS8 1495 aaKnown RBP51■■■■■ 5.75
SNAPC3-203ENST00000421710 DCAF1Q9Y4B6 1507 aa50.76■■■■■ 5.72
SNAPC3-203ENST00000421710 UNC13AQ9UPW8 1703 aa50.35■■■■■ 5.65
SNAPC3-203ENST00000421710 PABPN1Q86U42 306 aaKnown RBP eCLIP50.04■■■■■ 5.6
SNAPC3-203ENST00000421710 BICRAQ9NZM4 1560 aa49.95■■■■■ 5.59
SNAPC3-203ENST00000421710 SCRIBQ14160 1630 aa49.79■■■■■ 5.56
SNAPC3-203ENST00000421710 SHROOM4Q9ULL8 1493 aa49.57■■■■■ 5.53
SNAPC3-203ENST00000421710 DNAJC5BQ9UF47 199 aa49.38■■■■■ 5.5
SNAPC3-203ENST00000421710 EIF4G1Q04637 1599 aaKnown RBP48.71■■■■■ 5.39
SNAPC3-203ENST00000421710 CC2D2AQ9P2K1 1620 aa48.56■■■■■ 5.36
SNAPC3-203ENST00000421710 CECR2Q9BXF3 1484 aa48.29■■■■■ 5.32
SNAPC3-203ENST00000421710 SMARCA4P51532 1647 aa47.63■■■■■ 5.22
SNAPC3-203ENST00000421710 BAZ1AQ9NRL2 1556 aaPredicted RBP47.58■■■■■ 5.21
SNAPC3-203ENST00000421710 NCAPD3P42695 1498 aa47.46■■■■■ 5.19
SNAPC3-203ENST00000421710 SMARCA2P51531 1590 aa47.42■■■■■ 5.18
SNAPC3-203ENST00000421710 ATAD2BQ9ULI0 1458 aa47.41■■■■■ 5.18
SNAPC3-203ENST00000421710 HMGXB3Q12766 1538 aa47.24■■■■■ 5.15
SNAPC3-203ENST00000421710 PEG3Q9GZU2 1588 aa47.2■■■■■ 5.15
SNAPC3-203ENST00000421710 MROH2BQ7Z745 1585 aa47.18■■■■■ 5.14
SNAPC3-203ENST00000421710 BAZ1BQ9UIG0 1483 aaKnown RBP47.06■■■■■ 5.12
SNAPC3-203ENST00000421710 WIZO95785 1651 aa46.67■■■■■ 5.06
SNAPC3-203ENST00000421710 RSF1Q96T23 1441 aaPredicted RBP46.55■■■■■ 5.04
SNAPC3-203ENST00000421710 ERCC6Q03468 1493 aa46.35■■■■■ 5.01
SNAPC3-203ENST00000421710 NESP48681 1621 aa46.32■■■■■ 5
SNAPC3-203ENST00000421710 LAMC3Q9Y6N6 1575 aa46.29■■■■■ 5
SNAPC3-203ENST00000421710 TOP2AP11388 1531 aaKnown RBP46.22■■■■■ 4.99
SNAPC3-203ENST00000421710 CADPSQ9ULU8 1353 aa46.05■■■■■ 4.96
SNAPC3-203ENST00000421710 PDS5BQ9NTI5 1447 aa45.99■■■■■ 4.95
SNAPC3-203ENST00000421710 CUX2O14529 1486 aa45.98■■■■■ 4.95
SNAPC3-203ENST00000421710 KIF21AQ7Z4S6 1674 aa45.83■■■■■ 4.93
SNAPC3-203ENST00000421710 THOC2Q8NI27 1593 aaKnown RBP45.75■■■■■ 4.92
SNAPC3-203ENST00000421710 CFTRP13569 1480 aa45.73■■■■■ 4.91
SNAPC3-203ENST00000421710 CCDC88BA6NC98 1476 aa45.61■■■■■ 4.89
SNAPC3-203ENST00000421710 FANCD2Q9BXW9 1451 aa45.52■■■■■ 4.88
SNAPC3-203ENST00000421710 CEP164Q9UPV0 1460 aa45.52■■■■■ 4.88
SNAPC3-203ENST00000421710 MRC2Q9UBG0 1479 aa45.51■■■■■ 4.88
SNAPC3-203ENST00000421710 PRDM2Q13029 1718 aa45.42■■■■■ 4.86
SNAPC3-203ENST00000421710 WDR62O43379 1518 aa45.36■■■■■ 4.85
SNAPC3-203ENST00000421710 SUPT5HO00267 1087 aaKnown RBP45.13■■■■■ 4.82
SNAPC3-203ENST00000421710 URB2Q14146 1524 aaKnown RBP45.05■■■■■ 4.8
SNAPC3-203ENST00000421710 ABCC8Q09428 1581 aa44.82■■■■■ 4.77
SNAPC3-203ENST00000421710 DNAJC5Q9H3Z4 198 aa44.8■■■■■ 4.76
SNAPC3-203ENST00000421710 TOPBP1Q92547 1522 aa44.75■■■■■ 4.76
SNAPC3-203ENST00000421710 DNMBPQ6XZF7 1577 aa44.72■■■■■ 4.75
SNAPC3-203ENST00000421710 IFT140Q96RY7 1462 aa44.59■■■■■ 4.73
SNAPC3-203ENST00000421710 POLA1P09884 1462 aaPredicted RBP44.35■■■■■ 4.69
SNAPC3-203ENST00000421710 ZNF608Q9ULD9 1512 aaPredicted RBP44.32■■■■■ 4.69
SNAPC3-203ENST00000421710 CUX1P39880 1505 aa44.29■■■■■ 4.68
SNAPC3-203ENST00000421710 TARBP1Q13395 1621 aaKnown RBP44.29■■■■■ 4.68
SNAPC3-203ENST00000421710 FGD5Q6ZNL6 1462 aa44.21■■■■■ 4.67
SNAPC3-203ENST00000421710 EIF4G3O43432 1585 aaKnown RBP44.2■■■■■ 4.67
SNAPC3-203ENST00000421710 SOGA1O94964 1423 aa44.16■■■■■ 4.66
SNAPC3-203ENST00000421710 RAD54L2Q9Y4B4 1467 aa44.12■■■■■ 4.65
SNAPC3-203ENST00000421710 AQRO60306 1485 aaKnown RBP eCLIP44.04■■■■■ 4.641e-7■■□□□ 13.1
SNAPC3-203ENST00000421710 WDR97A6NE52 1622 aa44.04■■■■■ 4.64
SNAPC3-203ENST00000421710 OSCARQ8IYS5 282 aa43.98■■■■■ 4.63
SNAPC3-203ENST00000421710 WRNQ14191 1432 aaPredicted RBP eCLIP43.95■■■■■ 4.63
SNAPC3-203ENST00000421710 TDRD9Q8NDG6 1382 aaKnown RBP43.92■■■■■ 4.62
SNAPC3-203ENST00000421710 BIVM-ERCC5R4GMW8 1640 aa43.9■■■■■ 4.62
SNAPC3-203ENST00000421710 TOP2BQ02880 1626 aa43.89■■■■■ 4.62
SNAPC3-203ENST00000421710 SYNJ1O43426 1573 aa43.82■■■■■ 4.61
SNAPC3-203ENST00000421710 ABCA10Q8WWZ4 1543 aa43.79■■■■■ 4.6
SNAPC3-203ENST00000421710 GRIN2BQ13224 1484 aa43.72■■■■■ 4.59
SNAPC3-203ENST00000421710 CHD1O14646 1710 aa43.68■■■■■ 4.58
SNAPC3-203ENST00000421710 GAPVD1Q14C86 1478 aa43.68■■■■■ 4.58
SNAPC3-203ENST00000421710 SNAPC4Q5SXM2 1469 aa43.67■■■■■ 4.58
SNAPC3-203ENST00000421710 MAGI1Q96QZ7 1491 aaPredicted RBP43.66■■■■■ 4.58
SNAPC3-203ENST00000421710 ABCA5Q8WWZ7 1642 aa43.64■■■■■ 4.58
SNAPC3-203ENST00000421710 PBRM1Q86U86 1689 aa43.62■■■■■ 4.57
SNAPC3-203ENST00000421710 FBLN2P98095 1184 aa43.59■■■■■ 4.57
SNAPC3-203ENST00000421710 SYNJ2O15056 1496 aa43.47■■■■■ 4.55
SNAPC3-203ENST00000421710 CHMP7Q8WUX9 453 aaPredicted RBP43.47■■■■■ 4.55
SNAPC3-203ENST00000421710 ERICH3Q5RHP9 1530 aa43.29■■■■■ 4.52
SNAPC3-203ENST00000421710 RIMBP3CA6NJZ7 1639 aa43.29■■■■■ 4.52
SNAPC3-203ENST00000421710 RIMBP3BA6NNM3 1639 aa43.29■■■■■ 4.52
SNAPC3-203ENST00000421710 RIMBP3Q9UFD9 1639 aa43.29■■■■■ 4.52
SNAPC3-203ENST00000421710 ARHGEF11O15085 1522 aa43.26■■■■■ 4.52
SNAPC3-203ENST00000421710 ADAMTS12P58397 1594 aa43.25■■■■■ 4.51
SNAPC3-203ENST00000421710 CLASP1Q7Z460 1538 aa43.21■■■■■ 4.51
SNAPC3-203ENST00000421710 TRIM41Q8WV44 630 aa43.2■■■■■ 4.51
SNAPC3-203ENST00000421710 FHAD1B1AJZ9 1412 aa43.18■■■■■ 4.5
SNAPC3-203ENST00000421710 GRIN2AQ12879 1464 aa43.14■■■■■ 4.5
SNAPC3-203ENST00000421710 KIF27Q86VH2 1401 aa43.08■■■■■ 4.49
SNAPC3-203ENST00000421710 NUP160Q12769 1436 aa42.97■■■■■ 4.47
SNAPC3-203ENST00000421710 CEP170Q5SW79 1584 aa42.91■■■■■ 4.46
SNAPC3-203ENST00000421710 CUL7Q14999 1698 aa42.87■■■■■ 4.45
SNAPC3-203ENST00000421710 ARAP1Q96P48 1450 aa42.87■■■■■ 4.45
SNAPC3-203ENST00000421710 IGF1RP08069 1367 aa42.86■■■■■ 4.45
SNAPC3-203ENST00000421710 CYB5RLQ6IPT4 315 aa42.83■■■■■ 4.45
SNAPC3-203ENST00000421710 SHROOM2Q13796 1616 aa42.68■■■■■ 4.42
SNAPC3-203ENST00000421710 CARMIL1Q5VZK9 1371 aa42.64■■■■■ 4.42
SNAPC3-203ENST00000421710 RUSC2Q8N2Y8 1516 aa42.62■■■■■ 4.41
SNAPC3-203ENST00000421710 ERCC6L2Q5T890 1561 aa42.52■■■■■ 4.4
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms