RNA–Protein interactions for RNA: ENST00000579391.1

ACADVL-218, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 2

Gene ACADVL, Length 341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-218ENST00000579391 NISCHQ9Y2I1 1504 aa38.59■■■■□ 3.77
ACADVL-218ENST00000579391 CCDC180Q9P1Z9 1646 aa34.26■■■■□ 3.07
ACADVL-218ENST00000579391 ABCC9O60706 1549 aa33.5■■■□□ 2.95
ACADVL-218ENST00000579391 RB1CC1Q8TDY2 1594 aa32.21■■■□□ 2.75
ACADVL-218ENST00000579391 DCAF8L2P0C7V8 631 aa32.21■■■□□ 2.75
ACADVL-218ENST00000579391 ZCCHC6Q5VYS8 1495 aaKnown RBP32.18■■■□□ 2.74
ACADVL-218ENST00000579391 NACADO15069 1562 aa32.18■■■□□ 2.74
ACADVL-218ENST00000579391 MYO15BQ96JP2 1530 aa31.99■■■□□ 2.71
ACADVL-218ENST00000579391 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
ACADVL-218ENST00000579391 UNC13AQ9UPW8 1703 aa31.49■■■□□ 2.63
ACADVL-218ENST00000579391 SCRIBQ14160 1630 aa31.34■■■□□ 2.61
ACADVL-218ENST00000579391 PABPN1Q86U42 306 aaKnown RBP eCLIP31.3■■■□□ 2.62e-15■■■■■ 39
ACADVL-218ENST00000579391 BICRAQ9NZM4 1560 aa31.26■■■□□ 2.6
ACADVL-218ENST00000579391 SHROOM4Q9ULL8 1493 aa30.88■■■□□ 2.53
ACADVL-218ENST00000579391 DNAJC5BQ9UF47 199 aa30.64■■■□□ 2.5
ACADVL-218ENST00000579391 EIF4G1Q04637 1599 aaKnown RBP30.43■■■□□ 2.46
ACADVL-218ENST00000579391 CC2D2AQ9P2K1 1620 aa30.28■■■□□ 2.44
ACADVL-218ENST00000579391 CECR2Q9BXF3 1484 aa30.08■■■□□ 2.41
ACADVL-218ENST00000579391 SMARCA4P51532 1647 aa29.94■■■□□ 2.38
ACADVL-218ENST00000579391 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
ACADVL-218ENST00000579391 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
ACADVL-218ENST00000579391 ATAD2BQ9ULI0 1458 aa29.75■■■□□ 2.35
ACADVL-218ENST00000579391 SMARCA2P51531 1590 aa29.7■■■□□ 2.35
ACADVL-218ENST00000579391 NCAPD3P42695 1498 aa29.68■■■□□ 2.34
ACADVL-218ENST00000579391 PEG3Q9GZU2 1588 aa29.62■■■□□ 2.33
ACADVL-218ENST00000579391 HMGXB3Q12766 1538 aa29.57■■■□□ 2.32
ACADVL-218ENST00000579391 BAZ1BQ9UIG0 1483 aaKnown RBP29.52■■■□□ 2.32
ACADVL-218ENST00000579391 WIZO95785 1651 aa29.45■■■□□ 2.31
ACADVL-218ENST00000579391 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.3
ACADVL-218ENST00000579391 TOP2AP11388 1531 aaKnown RBP29.14■■■□□ 2.25
ACADVL-218ENST00000579391 NESP48681 1621 aa29.02■■■□□ 2.24
ACADVL-218ENST00000579391 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
ACADVL-218ENST00000579391 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
ACADVL-218ENST00000579391 CADPSQ9ULU8 1353 aa28.83■■■□□ 2.21
ACADVL-218ENST00000579391 CCDC88BA6NC98 1476 aa28.79■■■□□ 2.2
ACADVL-218ENST00000579391 SUPT5HO00267 1087 aaKnown RBP28.77■■■□□ 2.2
ACADVL-218ENST00000579391 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
ACADVL-218ENST00000579391 CFTRP13569 1480 aa28.69■■■□□ 2.18
ACADVL-218ENST00000579391 KIF21AQ7Z4S6 1674 aa28.67■■■□□ 2.18
ACADVL-218ENST00000579391 THOC2Q8NI27 1593 aaKnown RBP28.55■■■□□ 2.16
ACADVL-218ENST00000579391 FANCD2Q9BXW9 1451 aa28.53■■■□□ 2.16
ACADVL-218ENST00000579391 CEP164Q9UPV0 1460 aa28.49■■■□□ 2.15
ACADVL-218ENST00000579391 PRDM2Q13029 1718 aa28.48■■■□□ 2.15
ACADVL-218ENST00000579391 CUX2O14529 1486 aa28.47■■■□□ 2.15
ACADVL-218ENST00000579391 MRC2Q9UBG0 1479 aa28.43■■■□□ 2.14
ACADVL-218ENST00000579391 WDR62O43379 1518 aa28.33■■■□□ 2.13
ACADVL-218ENST00000579391 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
ACADVL-218ENST00000579391 URB2Q14146 1524 aaKnown RBP28.26■■■□□ 2.11
ACADVL-218ENST00000579391 TOPBP1Q92547 1522 aa28.09■■■□□ 2.09
ACADVL-218ENST00000579391 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
ACADVL-218ENST00000579391 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
ACADVL-218ENST00000579391 CUX1P39880 1505 aa27.93■■■□□ 2.06
ACADVL-218ENST00000579391 IFT140Q96RY7 1462 aa27.87■■■□□ 2.05
ACADVL-218ENST00000579391 POLA1P09884 1462 aaPredicted RBP27.86■■■□□ 2.05
ACADVL-218ENST00000579391 FGD5Q6ZNL6 1462 aa27.82■■■□□ 2.04
ACADVL-218ENST00000579391 TARBP1Q13395 1621 aaKnown RBP27.78■■■□□ 2.04
ACADVL-218ENST00000579391 ZNF608Q9ULD9 1512 aaPredicted RBP27.78■■■□□ 2.04
ACADVL-218ENST00000579391 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.03
ACADVL-218ENST00000579391 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
ACADVL-218ENST00000579391 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
ACADVL-218ENST00000579391 SOGA1O94964 1423 aa27.72■■■□□ 2.03
ACADVL-218ENST00000579391 TOP2BQ02880 1626 aa27.69■■■□□ 2.02
ACADVL-218ENST00000579391 BIVM-ERCC5R4GMW8 1640 aa27.69■■■□□ 2.02
ACADVL-218ENST00000579391 EIF4G3O43432 1585 aaKnown RBP27.68■■■□□ 2.02
ACADVL-218ENST00000579391 AQRO60306 1485 aaKnown RBP eCLIP27.62■■■□□ 2.01
ACADVL-218ENST00000579391 TDRD9Q8NDG6 1382 aaKnown RBP27.59■■■□□ 2.01
ACADVL-218ENST00000579391 WDR97A6NE52 1622 aa27.58■■■□□ 2.01
ACADVL-218ENST00000579391 ABCA10Q8WWZ4 1543 aa27.52■■■□□ 2
ACADVL-218ENST00000579391 ABCA5Q8WWZ7 1642 aa27.43■■□□□ 1.98
ACADVL-218ENST00000579391 GAPVD1Q14C86 1478 aa27.42■■□□□ 1.98
ACADVL-218ENST00000579391 GRIN2BQ13224 1484 aa27.39■■□□□ 1.98
ACADVL-218ENST00000579391 SNAPC4Q5SXM2 1469 aa27.38■■□□□ 1.97
ACADVL-218ENST00000579391 PBRM1Q86U86 1689 aa27.37■■□□□ 1.97
ACADVL-218ENST00000579391 MAGI1Q96QZ7 1491 aaPredicted RBP27.31■■□□□ 1.96
ACADVL-218ENST00000579391 CHD1O14646 1710 aa27.3■■□□□ 1.96
ACADVL-218ENST00000579391 OSCARQ8IYS5 282 aa27.28■■□□□ 1.96
ACADVL-218ENST00000579391 FBLN2P98095 1184 aa27.26■■□□□ 1.95
ACADVL-218ENST00000579391 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
ACADVL-218ENST00000579391 ERICH3Q5RHP9 1530 aa27.19■■□□□ 1.94
ACADVL-218ENST00000579391 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
ACADVL-218ENST00000579391 CHMP7Q8WUX9 453 aaPredicted RBP27.17■■□□□ 1.94
ACADVL-218ENST00000579391 KIF27Q86VH2 1401 aa27.16■■□□□ 1.94
ACADVL-218ENST00000579391 TRIM41Q8WV44 630 aa27.14■■□□□ 1.94
ACADVL-218ENST00000579391 FHAD1B1AJZ9 1412 aa27.09■■□□□ 1.93
ACADVL-218ENST00000579391 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
ACADVL-218ENST00000579391 IGF1RP08069 1367 aa27.03■■□□□ 1.92
ACADVL-218ENST00000579391 CLASP1Q7Z460 1538 aa27■■□□□ 1.91
ACADVL-218ENST00000579391 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
ACADVL-218ENST00000579391 CUL7Q14999 1698 aa26.97■■□□□ 1.91
ACADVL-218ENST00000579391 CEP170Q5SW79 1584 aa26.94■■□□□ 1.9
ACADVL-218ENST00000579391 NUP160Q12769 1436 aa26.92■■□□□ 1.9
ACADVL-218ENST00000579391 ARHGEF11O15085 1522 aa26.9■■□□□ 1.9
ACADVL-218ENST00000579391 RIMBP3CA6NJZ7 1639 aa26.9■■□□□ 1.9
ACADVL-218ENST00000579391 RIMBP3BA6NNM3 1639 aa26.9■■□□□ 1.9
ACADVL-218ENST00000579391 RIMBP3Q9UFD9 1639 aa26.9■■□□□ 1.9
ACADVL-218ENST00000579391 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
ACADVL-218ENST00000579391 CARMIL1Q5VZK9 1371 aa26.87■■□□□ 1.89
ACADVL-218ENST00000579391 RAPGEF2Q9Y4G8 1499 aa26.73■■□□□ 1.87
ACADVL-218ENST00000579391 SHROOM2Q13796 1616 aa26.71■■□□□ 1.87
ACADVL-218ENST00000579391 ARAP1Q96P48 1450 aa26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms