RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 NISCHQ9Y2I1 1504 aa40.6■■■■■ 4.09
SNAPC3-207ENST00000610884 CCDC180Q9P1Z9 1646 aa34.96■■■■□ 3.19
SNAPC3-207ENST00000610884 DCAF8L2P0C7V8 631 aa34.38■■■■□ 3.09
SNAPC3-207ENST00000610884 ZCCHC6Q5VYS8 1495 aaKnown RBP34.05■■■■□ 3.04
SNAPC3-207ENST00000610884 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.03
SNAPC3-207ENST00000610884 ABCC9O60706 1549 aa33.75■■■□□ 2.99
SNAPC3-207ENST00000610884 DCAF1Q9Y4B6 1507 aa33.16■■■□□ 2.9
SNAPC3-207ENST00000610884 SCRIBQ14160 1630 aa32.78■■■□□ 2.84
SNAPC3-207ENST00000610884 SUPT5HO00267 1087 aaKnown RBP32.75■■■□□ 2.83
SNAPC3-207ENST00000610884 NACADO15069 1562 aa32.67■■■□□ 2.82
SNAPC3-207ENST00000610884 MYO15BQ96JP2 1530 aa32.64■■■□□ 2.82
SNAPC3-207ENST00000610884 RB1CC1Q8TDY2 1594 aa32.45■■■□□ 2.79
SNAPC3-207ENST00000610884 PABPN1Q86U42 306 aaKnown RBP eCLIP32.12■■■□□ 2.73
SNAPC3-207ENST00000610884 UNC13AQ9UPW8 1703 aa31.97■■■□□ 2.71
SNAPC3-207ENST00000610884 CECR2Q9BXF3 1484 aa31.89■■■□□ 2.7
SNAPC3-207ENST00000610884 RSF1Q96T23 1441 aaPredicted RBP31.71■■■□□ 2.67
SNAPC3-207ENST00000610884 BICRAQ9NZM4 1560 aa31.65■■■□□ 2.66
SNAPC3-207ENST00000610884 MROH2BQ7Z745 1585 aa31.59■■■□□ 2.65
SNAPC3-207ENST00000610884 WIZO95785 1651 aa31.35■■■□□ 2.61
SNAPC3-207ENST00000610884 BAZ1AQ9NRL2 1556 aaPredicted RBP31.24■■■□□ 2.59
SNAPC3-207ENST00000610884 SMARCA4P51532 1647 aa31.16■■■□□ 2.58
SNAPC3-207ENST00000610884 CHIC1Q5VXU3 224 aa31.12■■■□□ 2.57
SNAPC3-207ENST00000610884 TOP2AP11388 1531 aaKnown RBP30.72■■■□□ 2.51
SNAPC3-207ENST00000610884 ATAD2BQ9ULI0 1458 aa30.71■■■□□ 2.51
SNAPC3-207ENST00000610884 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
SNAPC3-207ENST00000610884 CCDC88BA6NC98 1476 aa30.68■■■□□ 2.5
SNAPC3-207ENST00000610884 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
SNAPC3-207ENST00000610884 BAZ1BQ9UIG0 1483 aaKnown RBP30.56■■■□□ 2.48
SNAPC3-207ENST00000610884 PEG3Q9GZU2 1588 aa30.53■■■□□ 2.48
SNAPC3-207ENST00000610884 TRIM41Q8WV44 630 aa30.5■■■□□ 2.47
SNAPC3-207ENST00000610884 FAM9AQ8IZU1 332 aaPredicted RBP30.37■■■□□ 2.45
SNAPC3-207ENST00000610884 LOC105371045A0A1W2PR82 267 aa30.3■■■□□ 2.44
SNAPC3-207ENST00000610884 CC2D2AQ9P2K1 1620 aa30.29■■■□□ 2.44
SNAPC3-207ENST00000610884 NCAPD3P42695 1498 aa30.28■■■□□ 2.44
SNAPC3-207ENST00000610884 EHMT2Q96KQ7 1210 aa30.28■■■□□ 2.44
SNAPC3-207ENST00000610884 ABCC8Q09428 1581 aa30.26■■■□□ 2.43
SNAPC3-207ENST00000610884 DNAJC5BQ9UF47 199 aa30.18■■■□□ 2.42
SNAPC3-207ENST00000610884 HMGXB3Q12766 1538 aa30.11■■■□□ 2.41
SNAPC3-207ENST00000610884 WRNQ14191 1432 aaPredicted RBP eCLIP29.81■■■□□ 2.36
SNAPC3-207ENST00000610884 SOGA1O94964 1423 aa29.74■■■□□ 2.35
SNAPC3-207ENST00000610884 SYNJ1O43426 1573 aa29.72■■■□□ 2.35
SNAPC3-207ENST00000610884 CFTRP13569 1480 aa29.71■■■□□ 2.35
SNAPC3-207ENST00000610884 RUSC2Q8N2Y8 1516 aa29.7■■■□□ 2.34
SNAPC3-207ENST00000610884 NESP48681 1621 aa29.7■■■□□ 2.34
SNAPC3-207ENST00000610884 CADPSQ9ULU8 1353 aa29.67■■■□□ 2.34
SNAPC3-207ENST00000610884 CUX1P39880 1505 aa29.46■■■□□ 2.31
SNAPC3-207ENST00000610884 CSRNP3Q8WYN3 585 aa29.42■■■□□ 2.3
SNAPC3-207ENST00000610884 FANCD2Q9BXW9 1451 aa29.39■■■□□ 2.29
SNAPC3-207ENST00000610884 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
SNAPC3-207ENST00000610884 UBTFP17480 764 aaKnown RBP29.28■■■□□ 2.28
SNAPC3-207ENST00000610884 PRDM2Q13029 1718 aa29.27■■■□□ 2.28
SNAPC3-207ENST00000610884 BIVM-ERCC5R4GMW8 1640 aa29.25■■■□□ 2.27
SNAPC3-207ENST00000610884 RANGAP1P46060 587 aaPredicted RBP29.23■■■□□ 2.27
SNAPC3-207ENST00000610884 LAMC3Q9Y6N6 1575 aa29.15■■■□□ 2.26
SNAPC3-207ENST00000610884 FGD5Q6ZNL6 1462 aa29.14■■■□□ 2.25
SNAPC3-207ENST00000610884 PPARGC1BQ86YN6 1023 aaKnown RBP29.13■■■□□ 2.25
SNAPC3-207ENST00000610884 CEP164Q9UPV0 1460 aa29.11■■■□□ 2.25
SNAPC3-207ENST00000610884 EEA1Q15075 1411 aa29.1■■■□□ 2.25
SNAPC3-207ENST00000610884 RAD54L2Q9Y4B4 1467 aa29.09■■■□□ 2.25
SNAPC3-207ENST00000610884 PDS5BQ9NTI5 1447 aa29.07■■■□□ 2.24
SNAPC3-207ENST00000610884 KIF21AQ7Z4S6 1674 aa29.06■■■□□ 2.24
SNAPC3-207ENST00000610884 URB2Q14146 1524 aaKnown RBP29.05■■■□□ 2.24
SNAPC3-207ENST00000610884 TOPBP1Q92547 1522 aa29.04■■■□□ 2.24
SNAPC3-207ENST00000610884 CUX2O14529 1486 aa29.03■■■□□ 2.24
SNAPC3-207ENST00000610884 RAPGEF2Q9Y4G8 1499 aa29.02■■■□□ 2.24
SNAPC3-207ENST00000610884 KIF27Q86VH2 1401 aa28.97■■■□□ 2.23
SNAPC3-207ENST00000610884 PCGF6Q9BYE7 350 aa28.97■■■□□ 2.23
SNAPC3-207ENST00000610884 POLA1P09884 1462 aaPredicted RBP28.96■■■□□ 2.23
SNAPC3-207ENST00000610884 DNMBPQ6XZF7 1577 aa28.95■■■□□ 2.22
SNAPC3-207ENST00000610884 GOLGA3Q08378 1498 aa28.94■■■□□ 2.22
SNAPC3-207ENST00000610884 CEP162Q5TB80 1403 aa28.91■■■□□ 2.22
SNAPC3-207ENST00000610884 TTBK1Q5TCY1 1321 aaPredicted RBP28.91■■■□□ 2.22
SNAPC3-207ENST00000610884 TNIKQ9UKE5 1360 aa28.9■■■□□ 2.22
SNAPC3-207ENST00000610884 TDRD9Q8NDG6 1382 aaKnown RBP28.87■■■□□ 2.21
SNAPC3-207ENST00000610884 IGF1RP08069 1367 aa28.85■■■□□ 2.21
SNAPC3-207ENST00000610884 KIF21BO75037 1637 aa28.8■■■□□ 2.2
SNAPC3-207ENST00000610884 ERCC6Q03468 1493 aa28.78■■■□□ 2.2
SNAPC3-207ENST00000610884 PRXQ9BXM0 1461 aa28.78■■■□□ 2.2
SNAPC3-207ENST00000610884 CARMIL1Q5VZK9 1371 aa28.7■■■□□ 2.18
SNAPC3-207ENST00000610884 ABCA10Q8WWZ4 1543 aa28.69■■■□□ 2.18
SNAPC3-207ENST00000610884 MRC2Q9UBG0 1479 aa28.68■■■□□ 2.18
SNAPC3-207ENST00000610884 CLIP1P30622 1438 aa28.65■■■□□ 2.18
SNAPC3-207ENST00000610884 AQRO60306 1485 aaKnown RBP eCLIP28.62■■■□□ 2.171e-7■■□□□ 13.1
SNAPC3-207ENST00000610884 HRCP23327 699 aa28.56■■■□□ 2.16
SNAPC3-207ENST00000610884 ERICH3Q5RHP9 1530 aa28.55■■■□□ 2.16
SNAPC3-207ENST00000610884 GAPVD1Q14C86 1478 aa28.53■■■□□ 2.16
SNAPC3-207ENST00000610884 TRIM26Q12899 539 aaPredicted RBP28.53■■■□□ 2.16
SNAPC3-207ENST00000610884 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
SNAPC3-207ENST00000610884 P3H3Q8IVL6 736 aa28.53■■■□□ 2.16
SNAPC3-207ENST00000610884 TARBP1Q13395 1621 aaKnown RBP28.52■■■□□ 2.16
SNAPC3-207ENST00000610884 WDR97A6NE52 1622 aa28.48■■■□□ 2.15
SNAPC3-207ENST00000610884 WDR62O43379 1518 aa28.45■■■□□ 2.14
SNAPC3-207ENST00000610884 ABCA5Q8WWZ7 1642 aa28.42■■■□□ 2.14
SNAPC3-207ENST00000610884 THOC2Q8NI27 1593 aaKnown RBP28.4■■■□□ 2.14
SNAPC3-207ENST00000610884 ARAP1Q96P48 1450 aa28.36■■■□□ 2.13
SNAPC3-207ENST00000610884 IFT140Q96RY7 1462 aa28.3■■■□□ 2.12
SNAPC3-207ENST00000610884 ARHGAP35Q9NRY4 1499 aa28.3■■■□□ 2.12
SNAPC3-207ENST00000610884 FBLN2P98095 1184 aa28.3■■■□□ 2.12
SNAPC3-207ENST00000610884 VPS8Q8N3P4 1428 aa28.3■■■□□ 2.12
SNAPC3-207ENST00000610884 ATP1B4Q9UN42 357 aaPredicted RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms