RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 NISCHQ9Y2I1 1504 aa23.31■■□□□ 1.32
C4A-258ENST00000496659 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
C4A-258ENST00000496659 ABCC9O60706 1549 aa20.32■□□□□ 0.84
C4A-258ENST00000496659 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
C4A-258ENST00000496659 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
C4A-258ENST00000496659 RB1CC1Q8TDY2 1594 aa19.29■□□□□ 0.68
C4A-258ENST00000496659 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
C4A-258ENST00000496659 NACADO15069 1562 aa19.25■□□□□ 0.67
C4A-258ENST00000496659 DCAF8L2P0C7V8 631 aa19.25■□□□□ 0.67
C4A-258ENST00000496659 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
C4A-258ENST00000496659 PABPN1Q86U42 306 aaKnown RBP eCLIP19■□□□□ 0.63
C4A-258ENST00000496659 UNC13AQ9UPW8 1703 aa18.92■□□□□ 0.62
C4A-258ENST00000496659 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
C4A-258ENST00000496659 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
C4A-258ENST00000496659 SHROOM4Q9ULL8 1493 aa18.64■□□□□ 0.57
C4A-258ENST00000496659 CC2D2AQ9P2K1 1620 aa18.33■□□□□ 0.52
C4A-258ENST00000496659 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
C4A-258ENST00000496659 CECR2Q9BXF3 1484 aa18.26■□□□□ 0.51
C4A-258ENST00000496659 BAZ1AQ9NRL2 1556 aaPredicted RBP18.09■□□□□ 0.49
C4A-258ENST00000496659 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
C4A-258ENST00000496659 MROH2BQ7Z745 1585 aa17.94■□□□□ 0.46
C4A-258ENST00000496659 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.46
C4A-258ENST00000496659 SMARCA2P51531 1590 aa17.85■□□□□ 0.45
C4A-258ENST00000496659 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
C4A-258ENST00000496659 WIZO95785 1651 aa17.77■□□□□ 0.44
C4A-258ENST00000496659 ATAD2BQ9ULI0 1458 aa17.77■□□□□ 0.44
C4A-258ENST00000496659 SUPT5HO00267 1087 aaKnown RBP17.76■□□□□ 0.43
C4A-258ENST00000496659 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
C4A-258ENST00000496659 HMGXB3Q12766 1538 aa17.72■□□□□ 0.43
C4A-258ENST00000496659 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
C4A-258ENST00000496659 TOP2AP11388 1531 aaKnown RBP17.68■□□□□ 0.42
C4A-258ENST00000496659 NESP48681 1621 aa17.51■□□□□ 0.39
C4A-258ENST00000496659 ERCC6Q03468 1493 aa17.48■□□□□ 0.39
C4A-258ENST00000496659 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
C4A-258ENST00000496659 CUX2O14529 1486 aa17.39■□□□□ 0.37
C4A-258ENST00000496659 DNAJC5Q9H3Z4 198 aa17.38■□□□□ 0.37
C4A-258ENST00000496659 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
C4A-258ENST00000496659 CADPSQ9ULU8 1353 aa17.24■□□□□ 0.35
C4A-258ENST00000496659 THOC2Q8NI27 1593 aaKnown RBP17.23■□□□□ 0.35
C4A-258ENST00000496659 KIF21AQ7Z4S6 1674 aa17.23■□□□□ 0.35
C4A-258ENST00000496659 CFTRP13569 1480 aa17.21■□□□□ 0.35
C4A-258ENST00000496659 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.34
C4A-258ENST00000496659 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
C4A-258ENST00000496659 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
C4A-258ENST00000496659 FANCD2Q9BXW9 1451 aa17.04■□□□□ 0.32
C4A-258ENST00000496659 CEP164Q9UPV0 1460 aa17.01■□□□□ 0.31
C4A-258ENST00000496659 WDR62O43379 1518 aa17.01■□□□□ 0.31
C4A-258ENST00000496659 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
C4A-258ENST00000496659 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
C4A-258ENST00000496659 ABCC8Q09428 1581 aa16.9■□□□□ 0.3
C4A-258ENST00000496659 AEBP2Q6ZN18 517 aaPredicted RBP16.87■□□□□ 0.29
C4A-258ENST00000496659 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
C4A-258ENST00000496659 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
C4A-258ENST00000496659 BIVM-ERCC5R4GMW8 1640 aa16.83■□□□□ 0.28
C4A-258ENST00000496659 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
C4A-258ENST00000496659 CUX1P39880 1505 aa16.81■□□□□ 0.28
C4A-258ENST00000496659 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
C4A-258ENST00000496659 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
C4A-258ENST00000496659 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
C4A-258ENST00000496659 FGD5Q6ZNL6 1462 aa16.72■□□□□ 0.27
C4A-258ENST00000496659 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
C4A-258ENST00000496659 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
C4A-258ENST00000496659 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
C4A-258ENST00000496659 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
C4A-258ENST00000496659 SOGA1O94964 1423 aa16.62■□□□□ 0.25
C4A-258ENST00000496659 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
C4A-258ENST00000496659 WDR97A6NE52 1622 aa16.58■□□□□ 0.24
C4A-258ENST00000496659 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
C4A-258ENST00000496659 AQRO60306 1485 aaKnown RBP eCLIP16.57■□□□□ 0.24
C4A-258ENST00000496659 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
C4A-258ENST00000496659 EEA1Q15075 1411 aa16.57■□□□□ 0.24
C4A-258ENST00000496659 KIF27Q86VH2 1401 aa16.54■□□□□ 0.24
C4A-258ENST00000496659 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
C4A-258ENST00000496659 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
C4A-258ENST00000496659 TDRD9Q8NDG6 1382 aaKnown RBP16.49■□□□□ 0.23
C4A-258ENST00000496659 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
C4A-258ENST00000496659 FBLN2P98095 1184 aa16.44■□□□□ 0.22
C4A-258ENST00000496659 RIMBP3CA6NJZ7 1639 aa16.44■□□□□ 0.22
C4A-258ENST00000496659 RIMBP3BA6NNM3 1639 aa16.44■□□□□ 0.22
C4A-258ENST00000496659 RIMBP3Q9UFD9 1639 aa16.44■□□□□ 0.22
C4A-258ENST00000496659 CHD1O14646 1710 aa16.42■□□□□ 0.22
C4A-258ENST00000496659 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
C4A-258ENST00000496659 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
C4A-258ENST00000496659 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
C4A-258ENST00000496659 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
C4A-258ENST00000496659 FAM9AQ8IZU1 332 aaPredicted RBP16.39■□□□□ 0.21
C4A-258ENST00000496659 CUL7Q14999 1698 aa16.39■□□□□ 0.21
C4A-258ENST00000496659 ARHGEF11O15085 1522 aa16.39■□□□□ 0.21
C4A-258ENST00000496659 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
C4A-258ENST00000496659 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
C4A-258ENST00000496659 IGF1RP08069 1367 aa16.34■□□□□ 0.21
C4A-258ENST00000496659 MAGI1Q96QZ7 1491 aaPredicted RBP16.34■□□□□ 0.21
C4A-258ENST00000496659 CYB5RLQ6IPT4 315 aa16.33■□□□□ 0.2
C4A-258ENST00000496659 KIF21BO75037 1637 aa16.33■□□□□ 0.2
C4A-258ENST00000496659 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
C4A-258ENST00000496659 CHMP7Q8WUX9 453 aaPredicted RBP16.31■□□□□ 0.2
C4A-258ENST00000496659 FHAD1B1AJZ9 1412 aa16.3■□□□□ 0.2
C4A-258ENST00000496659 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
C4A-258ENST00000496659 CARMIL1Q5VZK9 1371 aa16.29■□□□□ 0.2
C4A-258ENST00000496659 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms