RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
SPTAN1-203ENST00000372739 SUPT5HO00267 1087 aaKnown RBP15.23■□□□□ 0.03
SPTAN1-203ENST00000372739 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
SPTAN1-203ENST00000372739 PELP1Q8IZL8 1130 aaKnown RBP15.02□□□□□ -0.01
SPTAN1-203ENST00000372739 SHROOM4Q9ULL8 1493 aa14.91□□□□□ -0.02
SPTAN1-203ENST00000372739 APLP2Q06481 763 aa14.82□□□□□ -0.04
SPTAN1-203ENST00000372739 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
SPTAN1-203ENST00000372739 FAM9AQ8IZU1 332 aaPredicted RBP14.74□□□□□ -0.05
SPTAN1-203ENST00000372739 CCER1Q8TC90 406 aaPredicted RBP14.34□□□□□ -0.11
SPTAN1-203ENST00000372739 TTBK1Q5TCY1 1321 aaPredicted RBP14.33□□□□□ -0.12
SPTAN1-203ENST00000372739 ERICH6Q7L0X2 663 aa14.32□□□□□ -0.12
SPTAN1-203ENST00000372739 CENPBP07199 599 aaPredicted RBP14.29□□□□□ -0.12
SPTAN1-203ENST00000372739 ZEB1P37275 1124 aaPredicted RBP14.28□□□□□ -0.12
SPTAN1-203ENST00000372739 PCGF6Q9BYE7 350 aa14.27□□□□□ -0.13
SPTAN1-203ENST00000372739 ATP1B4Q9UN42 357 aaPredicted RBP14.21□□□□□ -0.13
SPTAN1-203ENST00000372739 RANGAP1P46060 587 aaPredicted RBP14.2□□□□□ -0.14
SPTAN1-203ENST00000372739 TRIM41Q8WV44 630 aa14.19□□□□□ -0.14
SPTAN1-203ENST00000372739 UBTFP17480 764 aaKnown RBP14.09□□□□□ -0.15
SPTAN1-203ENST00000372739 NEFLP07196 543 aa14.07□□□□□ -0.16
SPTAN1-203ENST00000372739 MYT1Q01538 1121 aa13.86□□□□□ -0.19
SPTAN1-203ENST00000372739 YTHDC1Q96MU7 727 aaKnown RBP13.84□□□□□ -0.19
SPTAN1-203ENST00000372739 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.21
SPTAN1-203ENST00000372739 DAXXQ9UER7 740 aaPredicted RBP13.76□□□□□ -0.21
SPTAN1-203ENST00000372739 TRIM26Q12899 539 aaPredicted RBP13.72□□□□□ -0.21
SPTAN1-203ENST00000372739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.22
SPTAN1-203ENST00000372739 HNRNPUL2Q1KMD3 747 aaKnown RBP13.71□□□□□ -0.22
SPTAN1-203ENST00000372739 PPARGC1BQ86YN6 1023 aaKnown RBP13.67□□□□□ -0.22
SPTAN1-203ENST00000372739 POLR3GLQ9BT43 218 aa13.65□□□□□ -0.23
SPTAN1-203ENST00000372739 ITGAEP38570 1179 aa13.62□□□□□ -0.23
SPTAN1-203ENST00000372739 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
SPTAN1-203ENST00000372739 HRCP23327 699 aa13.49□□□□□ -0.25
SPTAN1-203ENST00000372739 CHIC1Q5VXU3 224 aa13.44□□□□□ -0.26
SPTAN1-203ENST00000372739 ZNF316A6NFI3 1004 aaPredicted RBP13.41□□□□□ -0.26
SPTAN1-203ENST00000372739 CNGB1Q14028 1251 aaPredicted RBP13.41□□□□□ -0.26
SPTAN1-203ENST00000372739 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
SPTAN1-203ENST00000372739 LOC105371045A0A1W2PR82 267 aa13.35□□□□□ -0.27
SPTAN1-203ENST00000372739 RTL5Q5HYW3 569 aaPredicted RBP13.35□□□□□ -0.27
SPTAN1-203ENST00000372739 FAM50AQ14320 339 aaKnown RBP13.32□□□□□ -0.28
SPTAN1-203ENST00000372739 TRIM52Q96A61 297 aa13.28□□□□□ -0.28
SPTAN1-203ENST00000372739 DIEXFQ68CQ4 756 aaKnown RBP13.27□□□□□ -0.29
SPTAN1-203ENST00000372739 CCDC180Q9P1Z9 1646 aa13.24□□□□□ -0.29
SPTAN1-203ENST00000372739 ZBTB47Q9UFB7 747 aaPredicted RBP13.22□□□□□ -0.29
SPTAN1-203ENST00000372739 NEUROD1Q13562 356 aa13.17□□□□□ -0.3
SPTAN1-203ENST00000372739 ANP32CO43423 234 aa13.16□□□□□ -0.3
SPTAN1-203ENST00000372739 ABCC9O60706 1549 aa13.13□□□□□ -0.31
SPTAN1-203ENST00000372739 ZNF326Q5BKZ1 582 aaKnown RBP13.1□□□□□ -0.31
SPTAN1-203ENST00000372739 NEFMP07197 916 aa13.1□□□□□ -0.31
SPTAN1-203ENST00000372739 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPTAN1-203ENST00000372739 CDK11AQ9UQ88 783 aaPredicted RBP13.09□□□□□ -0.31
SPTAN1-203ENST00000372739 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
SPTAN1-203ENST00000372739 FBLN2P98095 1184 aa13.06□□□□□ -0.32
SPTAN1-203ENST00000372739 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
SPTAN1-203ENST00000372739 BCANQ96GW7 911 aa13.03□□□□□ -0.32
SPTAN1-203ENST00000372739 GTF3C3Q9Y5Q9 886 aa12.92□□□□□ -0.34
SPTAN1-203ENST00000372739 BCL11AQ9H165 835 aa12.91□□□□□ -0.34
SPTAN1-203ENST00000372739 ANP32AP39687 249 aaKnown RBP12.9□□□□□ -0.34
SPTAN1-203ENST00000372739 ESF1Q9H501 851 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-203ENST00000372739 ZNF777Q9ULD5 760 aaPredicted RBP12.86□□□□□ -0.35
SPTAN1-203ENST00000372739 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
SPTAN1-203ENST00000372739 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
SPTAN1-203ENST00000372739 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
SPTAN1-203ENST00000372739 ANP32BQ92688 251 aaKnown RBP12.82□□□□□ -0.36
SPTAN1-203ENST00000372739 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
SPTAN1-203ENST00000372739 RB1CC1Q8TDY2 1594 aa12.79□□□□□ -0.36
SPTAN1-203ENST00000372739 TONSLQ96HA7 1378 aa12.79□□□□□ -0.36
SPTAN1-203ENST00000372739 UPF2Q9HAU5 1272 aaKnown RBP12.78□□□□□ -0.36
SPTAN1-203ENST00000372739 HSP90AA1P07900 732 aaKnown RBP12.78□□□□□ -0.36
SPTAN1-203ENST00000372739 SCRIBQ14160 1630 aa12.74□□□□□ -0.37
SPTAN1-203ENST00000372739 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
SPTAN1-203ENST00000372739 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
SPTAN1-203ENST00000372739 CHGAP10645 457 aaKnown RBP12.74□□□□□ -0.37
SPTAN1-203ENST00000372739 ACIN1Q9UKV3 1341 aaKnown RBP12.71□□□□□ -0.37
SPTAN1-203ENST00000372739 PLPPR3Q6T4P5 718 aa12.71□□□□□ -0.37
SPTAN1-203ENST00000372739 NACADO15069 1562 aa12.69□□□□□ -0.38
SPTAN1-203ENST00000372739 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.68□□□□□ -0.38
SPTAN1-203ENST00000372739 HNRNPUQ00839 825 aaKnown RBP eCLIP12.65□□□□□ -0.38
SPTAN1-203ENST00000372739 FKBP8Q14318 412 aa12.64□□□□□ -0.39
SPTAN1-203ENST00000372739 WDR43Q15061 677 aaKnown RBP eCLIP12.63□□□□□ -0.392e-6■■■□□ 18.6
SPTAN1-203ENST00000372739 TMC1Q8TDI8 760 aa12.63□□□□□ -0.39
SPTAN1-203ENST00000372739 FAM9BQ8IZU0 186 aa12.62□□□□□ -0.39
SPTAN1-203ENST00000372739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.6□□□□□ -0.392e-7■■■□□ 15.9
SPTAN1-203ENST00000372739 DCAF1Q9Y4B6 1507 aa12.58□□□□□ -0.4
SPTAN1-203ENST00000372739 TSPY4P0CV99 314 aa12.58□□□□□ -0.4
SPTAN1-203ENST00000372739 TSPY10P0CW01 314 aa12.58□□□□□ -0.4
SPTAN1-203ENST00000372739 DDX10Q13206 875 aaKnown RBP12.57□□□□□ -0.4
SPTAN1-203ENST00000372739 CCDC136Q96JN2 1154 aa12.57□□□□□ -0.4
SPTAN1-203ENST00000372739 MYH16Q9H6N6 1097 aa12.57□□□□□ -0.4
SPTAN1-203ENST00000372739 ZCCHC6Q5VYS8 1495 aaKnown RBP12.56□□□□□ -0.4
SPTAN1-203ENST00000372739 SCAF1Q9H7N4 1312 aaKnown RBP12.55□□□□□ -0.4
SPTAN1-203ENST00000372739 SALL2Q9Y467 1007 aaPredicted RBP12.55□□□□□ -0.4
SPTAN1-203ENST00000372739 MTUS2Q5JR59 1369 aa12.54□□□□□ -0.4
SPTAN1-203ENST00000372739 A0A0G2JS52 829 aa12.54□□□□□ -0.4
SPTAN1-203ENST00000372739 CHIC2Q9UKJ5 165 aa12.54□□□□□ -0.4
SPTAN1-203ENST00000372739 EIF5BO60841 1220 aaKnown RBP12.53□□□□□ -0.4
SPTAN1-203ENST00000372739 GLIPR1L2Q4G1C9 344 aa12.52□□□□□ -0.4
SPTAN1-203ENST00000372739 KDM2AQ9Y2K7 1162 aa12.5□□□□□ -0.41
SPTAN1-203ENST00000372739 CDK11BP21127 795 aaKnown RBP12.5□□□□□ -0.41
SPTAN1-203ENST00000372739 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
SPTAN1-203ENST00000372739 CHMP7Q8WUX9 453 aaPredicted RBP12.49□□□□□ -0.41
SPTAN1-203ENST00000372739 RSF1Q96T23 1441 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms